RNA–Protein interactions for RNA: ENSMUST00000021135.4

Ncbp3-201, Transcript of Nuclear cap-binding protein subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncbp3, Length 12,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp3-201ENSMUST00000021135 Dnttip2Q8R2M2 758 aaKnown RBP12.12□□□□□ -0.47
Ncbp3-201ENSMUST00000021135 Spryd3E9Q9B3 442 aa12.12□□□□□ -0.47
Ncbp3-201ENSMUST00000021135 SetQ9EQU5 289 aaKnown RBP12.12□□□□□ -0.47
Ncbp3-201ENSMUST00000021135 BccipQ9CWI3 316 aa12.11□□□□□ -0.47
Ncbp3-201ENSMUST00000021135 Map7d2A2AG50 781 aa12.11□□□□□ -0.47
Ncbp3-201ENSMUST00000021135 Calcoco2A2A6M5 331 aa12.1□□□□□ -0.47
Ncbp3-201ENSMUST00000021135 Erich6bQ9D4S6 220 aa12.1□□□□□ -0.47
Ncbp3-201ENSMUST00000021135 Prdm10Q3UTQ7 1184 aa12.09□□□□□ -0.47
Ncbp3-201ENSMUST00000021135 Rad21Q61550 635 aaKnown RBP12.07□□□□□ -0.48
Ncbp3-201ENSMUST00000021135 Gtf3c3Q3TMP1 882 aa12.04□□□□□ -0.48
Ncbp3-201ENSMUST00000021135 Ppm1gQ61074 542 aa12.03□□□□□ -0.48
Ncbp3-201ENSMUST00000021135 Rtn4Q99P72 1162 aaKnown RBP12.03□□□□□ -0.48
Ncbp3-201ENSMUST00000021135 Rrp12Q6P5B0 1295 aaKnown RBP12.03□□□□□ -0.48
Ncbp3-201ENSMUST00000021135 4933402E13RikQ9D4D2 429 aa12.02□□□□□ -0.48
Ncbp3-201ENSMUST00000021135 Casc1Q6TDU8 730 aa12.01□□□□□ -0.49
Ncbp3-201ENSMUST00000021135 Fbxo2Q80UW2 297 aa11.98□□□□□ -0.49
Ncbp3-201ENSMUST00000021135 Hnrnpul2Q00PI9 745 aaKnown RBP11.98□□□□□ -0.49
Ncbp3-201ENSMUST00000021135 IbspQ61711 324 aa11.98□□□□□ -0.49
Ncbp3-201ENSMUST00000021135 PrkcshO08795 521 aa11.98□□□□□ -0.49
Ncbp3-201ENSMUST00000021135 Trim26Q99PN3 545 aa11.98□□□□□ -0.49
Ncbp3-201ENSMUST00000021135 Eid3Q3V124 375 aa11.97□□□□□ -0.49
Ncbp3-201ENSMUST00000021135 Mrs2Q5NCE8 434 aa11.95□□□□□ -0.5
Ncbp3-201ENSMUST00000021135 PnnO35691 725 aaKnown RBP11.95□□□□□ -0.5
Ncbp3-201ENSMUST00000021135 Fgd1P52734 960 aa11.94□□□□□ -0.5
Ncbp3-201ENSMUST00000021135 Plekhg3Q4VAC9 1341 aa11.94□□□□□ -0.5
Ncbp3-201ENSMUST00000021135 Kiaa0754Q69ZZ9 979 aa11.94□□□□□ -0.5
Ncbp3-201ENSMUST00000021135 Hdac5Q9Z2V6 1113 aa11.93□□□□□ -0.5
Ncbp3-201ENSMUST00000021135 Atp1b4Q99ME6 356 aa11.91□□□□□ -0.5
Ncbp3-201ENSMUST00000021135 Lmod2Q3UHZ5 550 aa11.9□□□□□ -0.51
Ncbp3-201ENSMUST00000021135 P3h3Q8CG70 732 aa11.89□□□□□ -0.51
Ncbp3-201ENSMUST00000021135 Erich6D3Z6S9 713 aa11.89□□□□□ -0.51
Ncbp3-201ENSMUST00000021135 Gm973E9Q295 1059 aa11.87□□□□□ -0.51
Ncbp3-201ENSMUST00000021135 Gm13697A2AK42 830 aa11.86□□□□□ -0.51
Ncbp3-201ENSMUST00000021135 Ddrgk1Q80WW9 315 aa11.86□□□□□ -0.51
Ncbp3-201ENSMUST00000021135 SafbD3YXK2 937 aaKnown RBP11.86□□□□□ -0.51
Ncbp3-201ENSMUST00000021135 VgfQ0VGU4 617 aa11.85□□□□□ -0.51
Ncbp3-201ENSMUST00000021135 RdxP26043 583 aaKnown RBP11.84□□□□□ -0.51
Ncbp3-201ENSMUST00000021135 CalrP14211 416 aaKnown RBP11.83□□□□□ -0.51
Ncbp3-201ENSMUST00000021135 Gpatch11Q3UFS4 262 aa11.82□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Znf771Q8BJ90 317 aa11.82□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Trim30aP15533 496 aa11.82□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Pcmtd1P59913 357 aa11.82□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Ftsj3Q9DBE9 838 aaKnown RBP11.82□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 NischQ80TM9 1593 aa11.81□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Becn1O88597 448 aa11.8□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 PtmsQ9D0J8 101 aaKnown RBP11.8□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Ofd1Q80Z25 1017 aa11.8□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Dbr1Q923B1 550 aa11.79□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Znf526Q8BI66 675 aa11.79□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Cald1E9QA15 768 aaKnown RBP11.79□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Ipo9Q91YE6 1041 aa11.78□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Map7O88735 730 aa11.78□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Dusp9Q7TNL7 452 aa11.78□□□□□ -0.52
Ncbp3-201ENSMUST00000021135 Dnai1Q8C0M8 701 aa11.77□□□□□ -0.53
Ncbp3-201ENSMUST00000021135 B4galnt3Q6L8S8 986 aa11.76□□□□□ -0.53
Ncbp3-201ENSMUST00000021135 Wwc2Q6NXJ0 1187 aa11.75□□□□□ -0.53
Ncbp3-201ENSMUST00000021135 Mex3cQ05A36 652 aaKnown RBP11.75□□□□□ -0.53
Ncbp3-201ENSMUST00000021135 BbxQ8VBW5 907 aa11.74□□□□□ -0.53
Ncbp3-201ENSMUST00000021135 Slc4a3P16283 1227 aa11.74□□□□□ -0.53
Ncbp3-201ENSMUST00000021135 Apbb1Q9QXJ1 710 aa11.74□□□□□ -0.53
Ncbp3-201ENSMUST00000021135 Plcd4Q8K3R3 807 aa11.74□□□□□ -0.53
Ncbp3-201ENSMUST00000021135 Ush1cQ9ES64 910 aa11.74□□□□□ -0.53
Ncbp3-201ENSMUST00000021135 Gm13695A2AK44 830 aa11.72□□□□□ -0.53
Ncbp3-201ENSMUST00000021135 AppP12023 770 aa11.72□□□□□ -0.53
Ncbp3-201ENSMUST00000021135 SlkO54988 1233 aa11.71□□□□□ -0.53
Ncbp3-201ENSMUST00000021135 TimelessQ9R1X4 1197 aa11.7□□□□□ -0.54
Ncbp3-201ENSMUST00000021135 Fam43aQ8BUP8 424 aa11.7□□□□□ -0.54
Ncbp3-201ENSMUST00000021135 Dcaf1Q80TR8 1506 aa11.69□□□□□ -0.54
Ncbp3-201ENSMUST00000021135 Pdcl3Q8BVF2 240 aa11.69□□□□□ -0.54
Ncbp3-201ENSMUST00000021135 Tcerg1Q8CGF7 1100 aaKnown RBP11.69□□□□□ -0.54
Ncbp3-201ENSMUST00000021135 Supt16hQ920B9 1047 aa11.69□□□□□ -0.54
Ncbp3-201ENSMUST00000021135 Pes1Q9EQ61 584 aaKnown RBP11.69□□□□□ -0.54
Ncbp3-201ENSMUST00000021135 Armcx1Q9CX83 456 aa11.69□□□□□ -0.54
Ncbp3-201ENSMUST00000021135 Taf3Q5HZG4 932 aa11.67□□□□□ -0.54
Ncbp3-201ENSMUST00000021135 Mrvi1Q9WUX5 899 aaKnown RBP11.65□□□□□ -0.54
Ncbp3-201ENSMUST00000021135 Prm3Q62100 101 aa11.64□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 AcrbpQ3V140 540 aa11.64□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 MccE9PWI3 1003 aa11.64□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Ipo4Q8VI75 1082 aa11.64□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Ccer2J3QPU5 274 aa11.63□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Zrsr2Q62377 462 aaKnown RBP11.63□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Clstn1Q9EPL2 979 aa11.63□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 KnstrnQ9D9Z1 312 aaKnown RBP11.63□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Aebp2Q9Z248 504 aaKnown RBP11.62□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Gtf3c5Q8R2T8 520 aa11.62□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Arid4aF8VPQ2 1261 aaKnown RBP11.62□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Tomm22Q9CPQ3 142 aa11.62□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Cwc15Q9JHS9 229 aaKnown RBP11.61□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Ccdc34Q3UI66 367 aa11.61□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Pnmal2G3X9N3 661 aa11.61□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Hsp90b1P08113 802 aaKnown RBP11.61□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Anapc15P60007 132 aa11.61□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Anp32eP97822 260 aaKnown RBP11.61□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 R3hcc1Q8BSI6 488 aa11.61□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Samd1D3YXK1 519 aa11.6□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Zcchc6Q5BLK4 1491 aaKnown RBP11.6□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Tpm3-rs7D3Z2H9 248 aa11.6□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Tpm3P21107 285 aaKnown RBP11.6□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Cspp1B2RX88 1205 aa11.59□□□□□ -0.55
Ncbp3-201ENSMUST00000021135 Noc3lQ8VI84 807 aaKnown RBP11.58□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 56.9 ms