RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Unc13aQ4KUS2 1712 aa14.48□□□□□ -0.09
Clip3-201ENSMUST00000014065 Pds5bQ4VA53 1446 aaKnown RBP14.47□□□□□ -0.09
Clip3-201ENSMUST00000014065 Kif15Q6P9L6 1387 aa14.46□□□□□ -0.09
Clip3-201ENSMUST00000014065 Znf710Q3U288 666 aa14.46□□□□□ -0.1
Clip3-201ENSMUST00000014065 Sin3aQ60520 1274 aaKnown RBP14.46□□□□□ -0.1
Clip3-201ENSMUST00000014065 DiexfQ8BTT6 772 aaKnown RBP14.45□□□□□ -0.1
Clip3-201ENSMUST00000014065 Ccdc18Q640L5 1455 aa14.44□□□□□ -0.1
Clip3-201ENSMUST00000014065 Wdr62Q3U3T8 1523 aa14.44□□□□□ -0.1
Clip3-201ENSMUST00000014065 Chic2Q9D9G3 165 aa14.43□□□□□ -0.1
Clip3-201ENSMUST00000014065 Eif4g1Q6NZJ6 1600 aaKnown RBP14.42□□□□□ -0.1
Clip3-201ENSMUST00000014065 Rpap1Q80TE0 1409 aa14.41□□□□□ -0.1
Clip3-201ENSMUST00000014065 Arhgef5E9Q7D5 1581 aa14.39□□□□□ -0.11
Clip3-201ENSMUST00000014065 Nolc1E9Q5C9 702 aaKnown RBP14.39□□□□□ -0.11
Clip3-201ENSMUST00000014065 Frmpd1A2AKB4 1549 aa14.38□□□□□ -0.11
Clip3-201ENSMUST00000014065 Ppp4r2Q0VGB7 417 aa14.36□□□□□ -0.11
Clip3-201ENSMUST00000014065 P3h3Q8CG70 732 aa14.35□□□□□ -0.11
Clip3-201ENSMUST00000014065 AqrQ8CFQ3 1481 aaKnown RBP14.35□□□□□ -0.11
Clip3-201ENSMUST00000014065 Gm13697A2AK42 830 aa14.35□□□□□ -0.11
Clip3-201ENSMUST00000014065 Bcl11aQ9QYE3 773 aa14.35□□□□□ -0.11
Clip3-201ENSMUST00000014065 Naip1Q9QWK5 1403 aa14.34□□□□□ -0.11
Clip3-201ENSMUST00000014065 Lamc3Q9R0B6 1581 aa14.34□□□□□ -0.11
Clip3-201ENSMUST00000014065 Pelp1Q9DBD5 1123 aaKnown RBP14.33□□□□□ -0.11
Clip3-201ENSMUST00000014065 Npm1Q61937 292 aaKnown RBP14.33□□□□□ -0.12
Clip3-201ENSMUST00000014065 Ttbk1Q6PCN3 1308 aa14.31□□□□□ -0.12
Clip3-201ENSMUST00000014065 NrkQ9R0G8 1455 aa14.3□□□□□ -0.12
Clip3-201ENSMUST00000014065 Kdm5bQ80Y84 1544 aa14.3□□□□□ -0.12
Clip3-201ENSMUST00000014065 Ccer2J3QPU5 274 aa14.3□□□□□ -0.12
Clip3-201ENSMUST00000014065 Mrs2Q5NCE8 434 aa14.3□□□□□ -0.12
Clip3-201ENSMUST00000014065 NrdcQ8BHG1 1161 aa14.29□□□□□ -0.12
Clip3-201ENSMUST00000014065 Shroom4Q1W617 1475 aa14.28□□□□□ -0.12
Clip3-201ENSMUST00000014065 Tiam1Q60610 1591 aa14.28□□□□□ -0.12
Clip3-201ENSMUST00000014065 Wdr43Q6ZQL4 677 aaKnown RBP14.25□□□□□ -0.13
Clip3-201ENSMUST00000014065 Ifnlr1Q8CGK5 535 aa14.24□□□□□ -0.13
Clip3-201ENSMUST00000014065 Thoc2B1AZI6 1594 aaKnown RBP14.24□□□□□ -0.13
Clip3-201ENSMUST00000014065 Supt16hQ920B9 1047 aa14.23□□□□□ -0.13
Clip3-201ENSMUST00000014065 Wwc2Q6NXJ0 1187 aa14.23□□□□□ -0.13
Clip3-201ENSMUST00000014065 Aebp1Q640N1 1128 aa14.21□□□□□ -0.14
Clip3-201ENSMUST00000014065 Mia2Q91ZV0 1396 aa14.21□□□□□ -0.14
Clip3-201ENSMUST00000014065 Smg6P61406 1418 aaKnown RBP14.2□□□□□ -0.14
Clip3-201ENSMUST00000014065 Slx4Q6P1D7 1565 aa14.19□□□□□ -0.14
Clip3-201ENSMUST00000014065 CntlnA2AM05 1397 aa14.18□□□□□ -0.14
Clip3-201ENSMUST00000014065 3425401B19RikD3Z1D3 1412 aa14.18□□□□□ -0.14
Clip3-201ENSMUST00000014065 Mroh2bQ7M6Y6 1581 aa14.18□□□□□ -0.14
Clip3-201ENSMUST00000014065 Ercc6F8VPZ5 1481 aa14.18□□□□□ -0.14
Clip3-201ENSMUST00000014065 Dhx29Q6PGC1 1365 aaKnown RBP14.17□□□□□ -0.14
Clip3-201ENSMUST00000014065 Ubl4bQ9CQ84 188 aa14.17□□□□□ -0.14
Clip3-201ENSMUST00000014065 Fyco1Q8VDC1 1437 aa14.17□□□□□ -0.14
Clip3-201ENSMUST00000014065 Slc4a3P16283 1227 aa14.17□□□□□ -0.14
Clip3-201ENSMUST00000014065 Camsap1A2AHC3 1581 aa14.17□□□□□ -0.14
Clip3-201ENSMUST00000014065 Map3k1P53349 1493 aa14.17□□□□□ -0.14
Clip3-201ENSMUST00000014065 Rtl5Q5DTT4 599 aa14.17□□□□□ -0.14
Clip3-201ENSMUST00000014065 Pcf11G3X9Z4 1553 aa14.16□□□□□ -0.14
Clip3-201ENSMUST00000014065 UacaQ8CGB3 1411 aa14.16□□□□□ -0.14
Clip3-201ENSMUST00000014065 TchhA0A0B4J1F9 1599 aa14.16□□□□□ -0.14
Clip3-201ENSMUST00000014065 Ankrd26Q811D2 1581 aa14.13□□□□□ -0.15
Clip3-201ENSMUST00000014065 Fhad1A6PWD2 1420 aa14.13□□□□□ -0.15
Clip3-201ENSMUST00000014065 Grin2bQ01097 1482 aa14.13□□□□□ -0.15
Clip3-201ENSMUST00000014065 Exoc6Q8R313 802 aa14.12□□□□□ -0.15
Clip3-201ENSMUST00000014065 Ankrd36D3Z4K0 1415 aa14.1□□□□□ -0.15
Clip3-201ENSMUST00000014065 Carmil1Q6EDY6 1374 aa14.1□□□□□ -0.15
Clip3-201ENSMUST00000014065 Mphosph9A6H5Y1 991 aa14.1□□□□□ -0.15
Clip3-201ENSMUST00000014065 Zbtb4Q5F293 982 aa14.09□□□□□ -0.15
Clip3-201ENSMUST00000014065 Cux1P53564 1515 aa14.08□□□□□ -0.16
Clip3-201ENSMUST00000014065 Pak3Q61036 559 aa14.08□□□□□ -0.16
Clip3-201ENSMUST00000014065 Vps8Q0P5W1 1427 aa14.07□□□□□ -0.16
Clip3-201ENSMUST00000014065 Cux2P70298 1426 aa14.07□□□□□ -0.16
Clip3-201ENSMUST00000014065 Ccnb3Q810T2 1396 aa14.07□□□□□ -0.16
Clip3-201ENSMUST00000014065 Slc4a2P13808 1237 aaKnown RBP14.07□□□□□ -0.16
Clip3-201ENSMUST00000014065 Fam135aQ6NS59 1506 aa14.04□□□□□ -0.16
Clip3-201ENSMUST00000014065 Pkd2O35245 966 aa14.04□□□□□ -0.16
Clip3-201ENSMUST00000014065 Cabp1Q9JLK7 227 aa14.04□□□□□ -0.16
Clip3-201ENSMUST00000014065 Rgl3Q3UYI5 709 aa14.03□□□□□ -0.16
Clip3-201ENSMUST00000014065 Zbtb7cQ8VCZ7 619 aa14.03□□□□□ -0.16
Clip3-201ENSMUST00000014065 Zfp644E9QA22 1323 aa14.03□□□□□ -0.16
Clip3-201ENSMUST00000014065 Naip2Q9QUK4 1447 aa14.03□□□□□ -0.16
Clip3-201ENSMUST00000014065 Ofd1Q80Z25 1017 aa14.02□□□□□ -0.16
Clip3-201ENSMUST00000014065 Gm7298A0A0N4SVU1 1476 aa14.02□□□□□ -0.17
Clip3-201ENSMUST00000014065 Washc2Q6PGL7 1334 aa14.01□□□□□ -0.17
Clip3-201ENSMUST00000014065 PrkcshO08795 521 aa14.01□□□□□ -0.17
Clip3-201ENSMUST00000014065 Naip5Q9R016 1403 aa13.99□□□□□ -0.17
Clip3-201ENSMUST00000014065 Erich3F6QRE9 1637 aa13.99□□□□□ -0.17
Clip3-201ENSMUST00000014065 A2mQ6GQT1 1474 aa13.99□□□□□ -0.17
Clip3-201ENSMUST00000014065 LrpprcQ6PB66 1392 aaKnown RBP13.98□□□□□ -0.17
Clip3-201ENSMUST00000014065 Efcab5A0JP43 1406 aa13.98□□□□□ -0.17
Clip3-201ENSMUST00000014065 Usp47Q8BY87 1376 aa13.97□□□□□ -0.17
Clip3-201ENSMUST00000014065 Gm13695A2AK44 830 aa13.97□□□□□ -0.17
Clip3-201ENSMUST00000014065 Kcnh8P59111 1102 aa13.96□□□□□ -0.17
Clip3-201ENSMUST00000014065 Grwd1Q810D6 446 aaKnown RBP13.96□□□□□ -0.18
Clip3-201ENSMUST00000014065 Kif27Q7M6Z4 1394 aa13.95□□□□□ -0.18
Clip3-201ENSMUST00000014065 Rad54l2Q99NG0 1466 aa13.95□□□□□ -0.18
Clip3-201ENSMUST00000014065 Phldb1Q6PDH0 1371 aaKnown RBP13.94□□□□□ -0.18
Clip3-201ENSMUST00000014065 Duox2A2AQ99 1517 aa13.93□□□□□ -0.18
Clip3-201ENSMUST00000014065 Gm1043A0A140LJC2 1431 aa13.93□□□□□ -0.18
Clip3-201ENSMUST00000014065 Rad21Q61550 635 aaKnown RBP13.92□□□□□ -0.18
Clip3-201ENSMUST00000014065 Urb2E9Q7L1 1524 aaKnown RBP13.91□□□□□ -0.18
Clip3-201ENSMUST00000014065 Lmo7E9PYF4 1699 aaKnown RBP13.91□□□□□ -0.18
Clip3-201ENSMUST00000014065 Liat1Q810M6 228 aa13.91□□□□□ -0.18
Clip3-201ENSMUST00000014065 Rundc1Q0VDN7 615 aa13.9□□□□□ -0.18
Clip3-201ENSMUST00000014065 Ncoa2Q61026 1462 aa13.9□□□□□ -0.18
Clip3-201ENSMUST00000014065 NeflP08551 543 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms