RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 NrdcQ8BHG1 1161 aa25,86■■□□□ 1,73
Ubp1-201ENSMUST00000009885 Eea1Q8BL66 1411 aa25,84■■□□□ 1,73
Ubp1-201ENSMUST00000009885 Sin3aQ60520 1274 aaKnown RBP25,79■■□□□ 1,72
Ubp1-201ENSMUST00000009885 Amer1Q7TS75 1132 aa25,77■■□□□ 1,72
Ubp1-201ENSMUST00000009885 Mrs2Q5NCE8 434 aa25,74■■□□□ 1,71
Ubp1-201ENSMUST00000009885 Top2bQ64511 1612 aa25,72■■□□□ 1,71
Ubp1-201ENSMUST00000009885 Rpap1Q80TE0 1409 aa25,71■■□□□ 1,71
Ubp1-201ENSMUST00000009885 Baz1bQ9Z277 1479 aa25,68■■□□□ 1,7
Ubp1-201ENSMUST00000009885 Gm13697A2AK42 830 aa25,66■■□□□ 1,7
Ubp1-201ENSMUST00000009885 Top2aQ01320 1528 aaKnown RBP25,65■■□□□ 1,7
Ubp1-201ENSMUST00000009885 Slc4a3P16283 1227 aa25,64■■□□□ 1,69
Ubp1-201ENSMUST00000009885 Cttnbp2B9EJA2 1648 aa25,57■■□□□ 1,68
Ubp1-201ENSMUST00000009885 Chic2Q9D9G3 165 aa25,57■■□□□ 1,68
Ubp1-201ENSMUST00000009885 4933416C03RikQ3V063 378 aa25,56■■□□□ 1,68
Ubp1-201ENSMUST00000009885 Ccer2J3QPU5 274 aa25,52■■□□□ 1,68
Ubp1-201ENSMUST00000009885 Wwc2Q6NXJ0 1187 aa25,51■■□□□ 1,67
Ubp1-201ENSMUST00000009885 Pak3Q61036 559 aa25,49■■□□□ 1,67
Ubp1-201ENSMUST00000009885 Arap1Q4LDD4 1452 aa25,49■■□□□ 1,67
Ubp1-201ENSMUST00000009885 Ccdc18Q640L5 1455 aa25,49■■□□□ 1,67
Ubp1-201ENSMUST00000009885 Smg6P61406 1418 aaKnown RBP25,43■■□□□ 1,66
Ubp1-201ENSMUST00000009885 Ccdc27Q3V036 639 aa25,41■■□□□ 1,66
Ubp1-201ENSMUST00000009885 DaxxO35613 739 aa25,4■■□□□ 1,66
Ubp1-201ENSMUST00000009885 Arhgap35Q91YM2 1499 aa25,36■■□□□ 1,65
Ubp1-201ENSMUST00000009885 Hdac5Q9Z2V6 1113 aa25,35■■□□□ 1,65
Ubp1-201ENSMUST00000009885 Upf2A2AT37 1269 aaKnown RBP25,31■■□□□ 1,64
Ubp1-201ENSMUST00000009885 Exoc6Q8R313 802 aa25,29■■□□□ 1,64
Ubp1-201ENSMUST00000009885 Washc2Q6PGL7 1334 aa25,28■■□□□ 1,64
Ubp1-201ENSMUST00000009885 PtprkP35822 1457 aa25,27■■□□□ 1,64
Ubp1-201ENSMUST00000009885 Ofd1Q80Z25 1017 aa25,26■■□□□ 1,63
Ubp1-201ENSMUST00000009885 Smarca4Q3TKT4 1613 aaKnown RBP25,26■■□□□ 1,63
Ubp1-201ENSMUST00000009885 NeflP08551 543 aa25,25■■□□□ 1,63
Ubp1-201ENSMUST00000009885 Hsp90aa1P07901 733 aaKnown RBP25,24■■□□□ 1,63
Ubp1-201ENSMUST00000009885 BicraF8VPZ9 1578 aa25,24■■□□□ 1,63
Ubp1-201ENSMUST00000009885 Arhgef5E9Q7D5 1581 aa25,24■■□□□ 1,63
Ubp1-201ENSMUST00000009885 Mia2Q91ZV0 1396 aa25,2■■□□□ 1,62
Ubp1-201ENSMUST00000009885 Kif15Q6P9L6 1387 aa25,19■■□□□ 1,62
Ubp1-201ENSMUST00000009885 Naip1Q9QWK5 1403 aa25,18■■□□□ 1,62
Ubp1-201ENSMUST00000009885 Zbtb4Q5F293 982 aa25,16■■□□□ 1,62
Ubp1-201ENSMUST00000009885 Slc4a2P13808 1237 aaKnown RBP25,15■■□□□ 1,62
Ubp1-201ENSMUST00000009885 UacaQ8CGB3 1411 aa25,14■■□□□ 1,61
Ubp1-201ENSMUST00000009885 Kdm5bQ80Y84 1544 aa25,11■■□□□ 1,61
Ubp1-201ENSMUST00000009885 Liat1Q810M6 228 aa25,11■■□□□ 1,61
Ubp1-201ENSMUST00000009885 Ipo9Q91YE6 1041 aa25,1■■□□□ 1,61
Ubp1-201ENSMUST00000009885 AqrQ8CFQ3 1481 aaKnown RBP25,1■■□□□ 1,61
Ubp1-201ENSMUST00000009885 Kcnh8P59111 1102 aa25,08■■□□□ 1,61
Ubp1-201ENSMUST00000009885 Irx3P81067 507 aa25,08■■□□□ 1,6
Ubp1-201ENSMUST00000009885 Tcerg1Q8CGF7 1100 aaKnown RBP25,07■■□□□ 1,6
Ubp1-201ENSMUST00000009885 Npm1Q61937 292 aaKnown RBP25,07■■□□□ 1,6
Ubp1-201ENSMUST00000009885 Gtf3c3Q3TMP1 882 aa25,06■■□□□ 1,6
Ubp1-201ENSMUST00000009885 Rad21Q61550 635 aaKnown RBP25,05■■□□□ 1,6
Ubp1-201ENSMUST00000009885 Tiam1Q60610 1591 aa25,04■■□□□ 1,6
Ubp1-201ENSMUST00000009885 Dhx29Q6PGC1 1365 aaKnown RBP25,04■■□□□ 1,6
Ubp1-201ENSMUST00000009885 Anp32bQ9EST5 272 aaKnown RBP25,04■■□□□ 1,6
Ubp1-201ENSMUST00000009885 Gm13695A2AK44 830 aa25,03■■□□□ 1,6
Ubp1-201ENSMUST00000009885 ChgaP26339 463 aaKnown RBP25,03■■□□□ 1,6
Ubp1-201ENSMUST00000009885 Ankrd36D3Z4K0 1415 aa25■■□□□ 1,59
Ubp1-201ENSMUST00000009885 Ccdc9Q8VC31 543 aaKnown RBP25■■□□□ 1,59
Ubp1-201ENSMUST00000009885 Fyco1Q8VDC1 1437 aa25■■□□□ 1,59
Ubp1-201ENSMUST00000009885 Fhad1A6PWD2 1420 aa24,98■■□□□ 1,59
Ubp1-201ENSMUST00000009885 Mphosph9A6H5Y1 991 aa24,97■■□□□ 1,59
Ubp1-201ENSMUST00000009885 Rgl3Q3UYI5 709 aa24,97■■□□□ 1,59
Ubp1-201ENSMUST00000009885 CntlnA2AM05 1397 aa24,97■■□□□ 1,59
Ubp1-201ENSMUST00000009885 Plcd4Q8K3R3 807 aa24,96■■□□□ 1,59
Ubp1-201ENSMUST00000009885 Aebp1Q640N1 1128 aa24,95■■□□□ 1,59
Ubp1-201ENSMUST00000009885 TchhA0A0B4J1F9 1599 aa24,95■■□□□ 1,58
Ubp1-201ENSMUST00000009885 Egfem1Q8C088 590 aa24,93■■□□□ 1,58
Ubp1-201ENSMUST00000009885 CanxP35564 591 aaKnown RBP24,92■■□□□ 1,58
Ubp1-201ENSMUST00000009885 Arhgap27A2AB59 869 aa24,91■■□□□ 1,58
Ubp1-201ENSMUST00000009885 Pkd2O35245 966 aa24,91■■□□□ 1,58
Ubp1-201ENSMUST00000009885 NrkQ9R0G8 1455 aa24,9■■□□□ 1,58
Ubp1-201ENSMUST00000009885 Iqgap2Q3UQ44 1575 aa24,9■■□□□ 1,58
Ubp1-201ENSMUST00000009885 Eif4g1Q6NZJ6 1600 aaKnown RBP24,89■■□□□ 1,58
Ubp1-201ENSMUST00000009885 Zbtb7cQ8VCZ7 619 aa24,89■■□□□ 1,58
Ubp1-201ENSMUST00000009885 Shroom4Q1W617 1475 aa24,89■■□□□ 1,57
Ubp1-201ENSMUST00000009885 ArxO35085 564 aa24,87■■□□□ 1,57
Ubp1-201ENSMUST00000009885 B4galnt3Q6L8S8 986 aa24,86■■□□□ 1,57
Ubp1-201ENSMUST00000009885 3425401B19RikD3Z1D3 1412 aa24,86■■□□□ 1,57
Ubp1-201ENSMUST00000009885 Vps8Q0P5W1 1427 aa24,85■■□□□ 1,57
Ubp1-201ENSMUST00000009885 Grwd1Q810D6 446 aaKnown RBP24,83■■□□□ 1,56
Ubp1-201ENSMUST00000009885 Dbr1Q923B1 550 aa24,81■■□□□ 1,56
Ubp1-201ENSMUST00000009885 PnisrA2AJT4 805 aaKnown RBP24,79■■□□□ 1,56
Ubp1-201ENSMUST00000009885 Slx4Q6P1D7 1565 aa24,79■■□□□ 1,56
Ubp1-201ENSMUST00000009885 Cabp1Q9JLK7 227 aa24,78■■□□□ 1,56
Ubp1-201ENSMUST00000009885 L3mbtl2P59178 703 aa24,77■■□□□ 1,56
Ubp1-201ENSMUST00000009885 Usp47Q8BY87 1376 aa24,76■■□□□ 1,55
Ubp1-201ENSMUST00000009885 Naip5Q9R016 1403 aa24,76■■□□□ 1,55
Ubp1-201ENSMUST00000009885 Ccnb3Q810T2 1396 aa24,75■■□□□ 1,55
Ubp1-201ENSMUST00000009885 Card11Q8CIS0 1159 aa24,74■■□□□ 1,55
Ubp1-201ENSMUST00000009885 Pcf11G3X9Z4 1553 aa24,74■■□□□ 1,55
Ubp1-201ENSMUST00000009885 Map3k1P53349 1493 aa24,73■■□□□ 1,55
Ubp1-201ENSMUST00000009885 Rundc1Q0VDN7 615 aa24,73■■□□□ 1,55
Ubp1-201ENSMUST00000009885 Iqcf3Q9D498 203 aa24,72■■□□□ 1,55
Ubp1-201ENSMUST00000009885 Zfp644E9QA22 1323 aa24,72■■□□□ 1,55
Ubp1-201ENSMUST00000009885 Mroh2bQ7M6Y6 1581 aa24,7■■□□□ 1,54
Ubp1-201ENSMUST00000009885 Cwc22Q8C5N3 908 aaKnown RBP24,69■■□□□ 1,54
Ubp1-201ENSMUST00000009885 Carmil1Q6EDY6 1374 aa24,68■■□□□ 1,54
Ubp1-201ENSMUST00000009885 Naip2Q9QUK4 1447 aa24,67■■□□□ 1,54
Ubp1-201ENSMUST00000009885 Apbb1Q9QXJ1 710 aa24,67■■□□□ 1,54
Ubp1-201ENSMUST00000009885 Ncoa2Q61026 1462 aa24,66■■□□□ 1,54
Ubp1-201ENSMUST00000009885 Efcab5A0JP43 1406 aa24,65■■□□□ 1,54
Retrieved 100 of 22,080 RNA–protein pairs in 22,2 ms