RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 M0QY20 66 aa7.16□□□□□ -1.26
TNFRSF9-204ENST00000615230 TRACP01848 142 aa7.15□□□□□ -1.26
TNFRSF9-204ENST00000615230 MAJINQ3KP22 176 aa7.15□□□□□ -1.26
TNFRSF9-204ENST00000615230 BAALC-AS2P0C853 105 aa7.15□□□□□ -1.26
TNFRSF9-204ENST00000615230 DEFB1P60022 68 aa7.15□□□□□ -1.26
TNFRSF9-204ENST00000615230 Q6ZPA2 131 aa7.15□□□□□ -1.26
TNFRSF9-204ENST00000615230 DSCAMO60469 2012 aa7.15□□□□□ -1.26
TNFRSF9-204ENST00000615230 ZNF80P51504 273 aaPredicted RBP7.15□□□□□ -1.26
TNFRSF9-204ENST00000615230 DHRS4-AS1Q9P1J3 65 aa7.15□□□□□ -1.26
TNFRSF9-204ENST00000615230 MLST8Q9BVC4 326 aa7.15□□□□□ -1.27
TNFRSF9-204ENST00000615230 IGLV5-52A0A0A0MRZ9 124 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 A0A1W2PPR1 153 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 MED12Q93074 2177 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 IGHV4-4A0A075B6R2 117 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 DLEU1O43261 78 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 SPANXCQ9NY87 97 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 HAMPP81172 84 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 Q6ZS46 218 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 ANKRD29Q8N6D5 301 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 C12orf74Q32Q52 190 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 GDF5OSQ5U4N7 250 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 MUSTN1Q8IVN3 82 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 MIR7-3HGQ8N6C7 128 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 SS18L2Q9UHA2 77 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 A0A1B0GXF2 115 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 ODF3L2Q3SX64 289 aa7.14□□□□□ -1.27
TNFRSF9-204ENST00000615230 LOC105371267A0A1B0GV96 52 aa7.13□□□□□ -1.27
TNFRSF9-204ENST00000615230 IGLC3P0DOY3 106 aa7.13□□□□□ -1.27
TNFRSF9-204ENST00000615230 TRBV30A0A0K0K1B3 111 aa7.13□□□□□ -1.27
TNFRSF9-204ENST00000615230 IGLV2-18A0A075B6J9 118 aa7.13□□□□□ -1.27
TNFRSF9-204ENST00000615230 ODF1Q14990 250 aa7.13□□□□□ -1.27
TNFRSF9-204ENST00000615230 CHD3Q12873 2000 aaKnown RBP7.13□□□□□ -1.27
TNFRSF9-204ENST00000615230 M0R2N4 97 aa7.13□□□□□ -1.27
TNFRSF9-204ENST00000615230 M0R378 163 aa7.13□□□□□ -1.27
TNFRSF9-204ENST00000615230 MAP1BP46821 2468 aaKnown RBP7.12□□□□□ -1.27
TNFRSF9-204ENST00000615230 TRBV27A0A0K0K1C4 114 aa7.12□□□□□ -1.27
TNFRSF9-204ENST00000615230 UBE2D3P61077 147 aa7.12□□□□□ -1.27
TNFRSF9-204ENST00000615230 UBE2D2P62837 147 aa7.12□□□□□ -1.27
TNFRSF9-204ENST00000615230 COA6Q5JTJ3 125 aaKnown RBP7.12□□□□□ -1.27
TNFRSF9-204ENST00000615230 ANAPC13Q9BS18 74 aa7.12□□□□□ -1.27
TNFRSF9-204ENST00000615230 KIAA2026Q5HYC2 2103 aa7.12□□□□□ -1.27
TNFRSF9-204ENST00000615230 RBX1P62877 108 aa7.12□□□□□ -1.27
TNFRSF9-204ENST00000615230 PCNX3Q9H6A9 2034 aa7.12□□□□□ -1.27
TNFRSF9-204ENST00000615230 K7EP34 96 aa7.12□□□□□ -1.27
TNFRSF9-204ENST00000615230 NREPQ16612 68 aa7.11□□□□□ -1.27
TNFRSF9-204ENST00000615230 SPATA3Q8NHX4 192 aa7.11□□□□□ -1.27
TNFRSF9-204ENST00000615230 RPL28P46779 137 aaKnown RBP7.11□□□□□ -1.27
TNFRSF9-204ENST00000615230 MALRD1Q5VYJ5 2156 aa7.11□□□□□ -1.27
TNFRSF9-204ENST00000615230 TIMM17BO60830 172 aa7.11□□□□□ -1.27
TNFRSF9-204ENST00000615230 PYY3Q5JQD4 70 aa7.11□□□□□ -1.27
TNFRSF9-204ENST00000615230 USF3Q68DE3 2245 aa7.1□□□□□ -1.27
TNFRSF9-204ENST00000615230 LINC01561Q8N1V8 128 aa7.1□□□□□ -1.27
TNFRSF9-204ENST00000615230 A0A1W2PPM0 123 aa7.1□□□□□ -1.27
TNFRSF9-204ENST00000615230 IGLV2-8P01709 118 aa7.1□□□□□ -1.27
TNFRSF9-204ENST00000615230 UBE2V1Q13404 147 aa7.1□□□□□ -1.27
TNFRSF9-204ENST00000615230 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.1□□□□□ -1.27
TNFRSF9-204ENST00000615230 MP68P56378 58 aa7.1□□□□□ -1.27
TNFRSF9-204ENST00000615230 BEAN1Q3B7T3 259 aa7.1□□□□□ -1.27
TNFRSF9-204ENST00000615230 EML5Q05BV3 1969 aa7.1□□□□□ -1.27
TNFRSF9-204ENST00000615230 FAM19A5Q7Z5A7 132 aaPredicted RBP7.1□□□□□ -1.27
TNFRSF9-204ENST00000615230 IGLV4-3A0A075B6K6 122 aa7.09□□□□□ -1.27
TNFRSF9-204ENST00000615230 LINC00959A0A1B0GUT2 108 aa7.09□□□□□ -1.27
TNFRSF9-204ENST00000615230 TMEM223A0PJW6 202 aa7.09□□□□□ -1.27
TNFRSF9-204ENST00000615230 WFDC10AQ9H1F0 79 aa7.09□□□□□ -1.27
TNFRSF9-204ENST00000615230 ABCA4P78363 2273 aa7.09□□□□□ -1.27
TNFRSF9-204ENST00000615230 H3BNG1 76 aa7.09□□□□□ -1.27
TNFRSF9-204ENST00000615230 SPATA12Q7Z6I5 190 aa7.09□□□□□ -1.27
TNFRSF9-204ENST00000615230 RBM3P98179 157 aaKnown RBP7.09□□□□□ -1.27
TNFRSF9-204ENST00000615230 MED12LQ86YW9 2145 aa7.09□□□□□ -1.27
TNFRSF9-204ENST00000615230 Q8IZM0 81 aa7.09□□□□□ -1.27
TNFRSF9-204ENST00000615230 IGKV2D-26A0A0A0MRZ7 120 aa7.08□□□□□ -1.28
TNFRSF9-204ENST00000615230 CEMP1Q6PRD7 247 aaPredicted RBP7.08□□□□□ -1.28
TNFRSF9-204ENST00000615230 SMIM20Q8N5G0 67 aa7.08□□□□□ -1.28
TNFRSF9-204ENST00000615230 HIGD2AQ9BW72 106 aa7.08□□□□□ -1.28
TNFRSF9-204ENST00000615230 PRB2P02812 416 aaPredicted RBP7.08□□□□□ -1.28
TNFRSF9-204ENST00000615230 RNASE3P12724 160 aaKnown RBP7.08□□□□□ -1.28
TNFRSF9-204ENST00000615230 A0A0B4J2C4 111 aa7.08□□□□□ -1.28
TNFRSF9-204ENST00000615230 KRTAP24-1Q3LI83 254 aa7.08□□□□□ -1.28
TNFRSF9-204ENST00000615230 RIF1Q5UIP0 2472 aaKnown RBP7.07□□□□□ -1.28
TNFRSF9-204ENST00000615230 WWC2-AS2Q96NR7 200 aa7.07□□□□□ -1.28
TNFRSF9-204ENST00000615230 ALPK2Q86TB3 2170 aa7.07□□□□□ -1.28
TNFRSF9-204ENST00000615230 RAI1Q7Z5J4 1906 aaPredicted RBP7.07□□□□□ -1.28
TNFRSF9-204ENST00000615230 HIST2H2BDQ6DRA6 164 aa7.07□□□□□ -1.28
TNFRSF9-204ENST00000615230 UBE2D4Q9Y2X8 147 aa7.07□□□□□ -1.28
TNFRSF9-204ENST00000615230 DOCK10Q96BY6 2186 aa7.07□□□□□ -1.28
TNFRSF9-204ENST00000615230 IGLV2-11P01706 119 aa7.07□□□□□ -1.28
TNFRSF9-204ENST00000615230 EGFEM1PQ0D2K5 195 aa7.07□□□□□ -1.28
TNFRSF9-204ENST00000615230 CACNA1DQ01668 2161 aa7.06□□□□□ -1.28
TNFRSF9-204ENST00000615230 TSHBP01222 138 aa7.06□□□□□ -1.28
TNFRSF9-204ENST00000615230 PLAC8L1A1L4L8 177 aa7.06□□□□□ -1.28
TNFRSF9-204ENST00000615230 TCL1BO95988 128 aa7.06□□□□□ -1.28
TNFRSF9-204ENST00000615230 G3V4G9 280 aa7.06□□□□□ -1.28
TNFRSF9-204ENST00000615230 RETNQ9HD89 108 aa7.06□□□□□ -1.28
TNFRSF9-204ENST00000615230 ATG2AQ2TAZ0 1938 aa7.06□□□□□ -1.28
TNFRSF9-204ENST00000615230 LRCOL1A6NCL2 159 aa7.06□□□□□ -1.28
TNFRSF9-204ENST00000615230 POM121L12Q8N7R1 296 aa7.06□□□□□ -1.28
TNFRSF9-204ENST00000615230 C2orf48Q96LS8 159 aa7.06□□□□□ -1.28
TNFRSF9-204ENST00000615230 TRAV23DV6A0A075B6W5 121 aa7.05□□□□□ -1.28
TNFRSF9-204ENST00000615230 CHKB-CPT1BH3BT56 60 aa7.05□□□□□ -1.28
TNFRSF9-204ENST00000615230 ARID1AO14497 2285 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms