RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 RBMY1FQ15415 496 aaKnown RBP10.71□□□□□ -0.7
PCDHB16-201ENST00000609684 DEFB114Q30KQ6 69 aa10.71□□□□□ -0.7
PCDHB16-201ENST00000609684 RNASE8Q8TDE3 154 aaKnown RBP10.71□□□□□ -0.7
PCDHB16-201ENST00000609684 H0YGX0 51 aa10.7□□□□□ -0.7
PCDHB16-201ENST00000609684 TEN1Q86WV5 123 aa10.7□□□□□ -0.7
PCDHB16-201ENST00000609684 RPL18AQ02543 176 aaKnown RBP10.7□□□□□ -0.7
PCDHB16-201ENST00000609684 PRO0255Q9UI72 69 aa10.7□□□□□ -0.7
PCDHB16-201ENST00000609684 INSL3P51460 131 aa10.69□□□□□ -0.7
PCDHB16-201ENST00000609684 UBE2BP63146 152 aa10.69□□□□□ -0.7
PCDHB16-201ENST00000609684 ATG2AQ2TAZ0 1938 aa10.69□□□□□ -0.7
PCDHB16-201ENST00000609684 CCL18P55774 89 aa10.69□□□□□ -0.7
PCDHB16-201ENST00000609684 DEFB105AQ8NG35 78 aa10.69□□□□□ -0.7
PCDHB16-201ENST00000609684 MIR7-3HGQ8N6C7 128 aa10.69□□□□□ -0.7
PCDHB16-201ENST00000609684 KLK12Q9UKR0 248 aa10.69□□□□□ -0.7
PCDHB16-201ENST00000609684 RNF185Q96GF1 192 aa10.68□□□□□ -0.7
PCDHB16-201ENST00000609684 Q6ZSV7 163 aa10.67□□□□□ -0.7
PCDHB16-201ENST00000609684 NEXN-AS1Q8NBZ9 246 aa10.67□□□□□ -0.7
PCDHB16-201ENST00000609684 SPAG11BQ08648 103 aa10.67□□□□□ -0.7
PCDHB16-201ENST00000609684 CLEC2BQ92478 149 aa10.67□□□□□ -0.7
PCDHB16-201ENST00000609684 NDUFA1O15239 70 aa10.66□□□□□ -0.7
PCDHB16-201ENST00000609684 NFE4Q86UQ8 179 aa10.66□□□□□ -0.7
PCDHB16-201ENST00000609684 NDUFA11Q86Y39 141 aa10.66□□□□□ -0.7
PCDHB16-201ENST00000609684 SPANXDQ9BXN6 97 aa10.66□□□□□ -0.7
PCDHB16-201ENST00000609684 TNRC6BQ9UPQ9 1833 aaKnown RBP10.66□□□□□ -0.7
PCDHB16-201ENST00000609684 PSMB8P28062 276 aa10.66□□□□□ -0.7
PCDHB16-201ENST00000609684 ETDCA0A1B0GVM5 59 aa10.65□□□□□ -0.7
PCDHB16-201ENST00000609684 F8W735 103 aaPredicted RBP10.65□□□□□ -0.7
PCDHB16-201ENST00000609684 LINC00467Q9BRT7 94 aa10.65□□□□□ -0.7
PCDHB16-201ENST00000609684 U3KQK5 164 aa10.65□□□□□ -0.7
PCDHB16-201ENST00000609684 ACYP1P07311 99 aa10.65□□□□□ -0.7
PCDHB16-201ENST00000609684 NCR3O14931 201 aa10.65□□□□□ -0.71
PCDHB16-201ENST00000609684 HIST2H2BDQ6DRA6 164 aa10.65□□□□□ -0.71
PCDHB16-201ENST00000609684 Q6ZS46 218 aa10.64□□□□□ -0.71
PCDHB16-201ENST00000609684 ZNF843Q8N446 348 aa10.64□□□□□ -0.71
PCDHB16-201ENST00000609684 LECT2O14960 151 aa10.64□□□□□ -0.71
PCDHB16-201ENST00000609684 CXCL5P42830 114 aa10.64□□□□□ -0.71
PCDHB16-201ENST00000609684 A0A0J9YXY3 114 aa10.64□□□□□ -0.71
PCDHB16-201ENST00000609684 TLN2Q9Y4G6 2542 aa10.64□□□□□ -0.71
PCDHB16-201ENST00000609684 ANKRD11Q6UB99 2663 aaPredicted RBP10.64□□□□□ -0.71
PCDHB16-201ENST00000609684 M0QY20 66 aa10.64□□□□□ -0.71
PCDHB16-201ENST00000609684 C11orf21Q9P2W6 132 aa10.64□□□□□ -0.71
PCDHB16-201ENST00000609684 IGKV2D-26A0A0A0MRZ7 120 aa10.63□□□□□ -0.71
PCDHB16-201ENST00000609684 FOXI1Q12951 378 aa10.63□□□□□ -0.71
PCDHB16-201ENST00000609684 PRR9Q5T870 116 aa10.63□□□□□ -0.71
PCDHB16-201ENST00000609684 MIAQ16674 131 aa10.63□□□□□ -0.71
PCDHB16-201ENST00000609684 PTH2Q96A98 100 aa10.63□□□□□ -0.71
PCDHB16-201ENST00000609684 TRBV10-2A0A0K0K1G8 114 aa10.63□□□□□ -0.71
PCDHB16-201ENST00000609684 hADV29S1A0JD25 119 aa10.63□□□□□ -0.71
PCDHB16-201ENST00000609684 CDKN2A-AS1Q9UH64 79 aa10.63□□□□□ -0.71
PCDHB16-201ENST00000609684 IGLV4-3A0A075B6K6 122 aa10.62□□□□□ -0.71
PCDHB16-201ENST00000609684 ZNF702PQ9H963 129 aa10.62□□□□□ -0.71
PCDHB16-201ENST00000609684 PRRC2AP48634 2157 aaKnown RBP10.62□□□□□ -0.71
PCDHB16-201ENST00000609684 FAM222AQ5U5X8 452 aa10.62□□□□□ -0.71
PCDHB16-201ENST00000609684 ZNF22P17026 224 aaPredicted RBP10.61□□□□□ -0.71
PCDHB16-201ENST00000609684 PSMG3-AS1Q96PY0 264 aa10.61□□□□□ -0.71
PCDHB16-201ENST00000609684 TRAV26-1A0A087WT03 109 aa10.61□□□□□ -0.71
PCDHB16-201ENST00000609684 PROK1P58294 105 aa10.61□□□□□ -0.71
PCDHB16-201ENST00000609684 CFAP126Q5VTH2 177 aa10.61□□□□□ -0.71
PCDHB16-201ENST00000609684 USP9XQ93008 2570 aaPredicted RBP10.61□□□□□ -0.71
PCDHB16-201ENST00000609684 RNASE3P12724 160 aaKnown RBP10.61□□□□□ -0.71
PCDHB16-201ENST00000609684 H3BT86 120 aa10.6□□□□□ -0.71
PCDHB16-201ENST00000609684 MAPKAPK5-AS1Q8N8E1 139 aa10.6□□□□□ -0.71
PCDHB16-201ENST00000609684 INAFM1C9JVW0 142 aa10.6□□□□□ -0.71
PCDHB16-201ENST00000609684 TCL1BO95988 128 aa10.59□□□□□ -0.71
PCDHB16-201ENST00000609684 TRACP01848 142 aa10.59□□□□□ -0.71
PCDHB16-201ENST00000609684 TIRAPP58753 221 aa10.59□□□□□ -0.71
PCDHB16-201ENST00000609684 IGLV1-40P01703 118 aa10.59□□□□□ -0.71
PCDHB16-201ENST00000609684 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
PCDHB16-201ENST00000609684 NRACQ8N912 160 aa10.59□□□□□ -0.71
PCDHB16-201ENST00000609684 TM2D2Q9BX73 214 aa10.59□□□□□ -0.71
PCDHB16-201ENST00000609684 IGKV3D-7A0A0C4DH55 119 aa10.58□□□□□ -0.72
PCDHB16-201ENST00000609684 FUSP35637 526 aaKnown RBP eCLIP10.58□□□□□ -0.72
PCDHB16-201ENST00000609684 C18orf65Q6ZTR6 163 aa10.58□□□□□ -0.72
PCDHB16-201ENST00000609684 A0A0B4J2C4 111 aa10.58□□□□□ -0.72
PCDHB16-201ENST00000609684 TRBV27A0A0K0K1C4 114 aa10.58□□□□□ -0.72
PCDHB16-201ENST00000609684 TMEM223A0PJW6 202 aa10.58□□□□□ -0.72
PCDHB16-201ENST00000609684 GAS8-AS1O95177 125 aa10.58□□□□□ -0.72
PCDHB16-201ENST00000609684 KLLNB2CW77 178 aa10.57□□□□□ -0.72
PCDHB16-201ENST00000609684 AVPP01185 164 aa10.57□□□□□ -0.72
PCDHB16-201ENST00000609684 LINC00482Q8N8I6 264 aa10.57□□□□□ -0.72
PCDHB16-201ENST00000609684 SMIM9A6NGZ8 99 aa10.56□□□□□ -0.72
PCDHB16-201ENST00000609684 REG3AQ06141 175 aa10.56□□□□□ -0.72
PCDHB16-201ENST00000609684 JMJD1CQ15652 2540 aa10.56□□□□□ -0.72
PCDHB16-201ENST00000609684 G3V4G9 280 aa10.56□□□□□ -0.72
PCDHB16-201ENST00000609684 IGHV4-28A0A0C4DH34 117 aa10.56□□□□□ -0.72
PCDHB16-201ENST00000609684 TRBV6-5A0A0K0K1A5 114 aa10.56□□□□□ -0.72
PCDHB16-201ENST00000609684 LYRM9A8MSI8 78 aa10.56□□□□□ -0.72
PCDHB16-201ENST00000609684 B5MCH6 92 aa10.56□□□□□ -0.72
PCDHB16-201ENST00000609684 DIRC1Q969H9 104 aa10.56□□□□□ -0.72
PCDHB16-201ENST00000609684 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
PCDHB16-201ENST00000609684 ABCA12Q86UK0 2595 aa10.55□□□□□ -0.72
PCDHB16-201ENST00000609684 DCANP1Q8TF63 244 aa10.55□□□□□ -0.72
PCDHB16-201ENST00000609684 USP9YO00507 2555 aaPredicted RBP10.55□□□□□ -0.72
PCDHB16-201ENST00000609684 LINC01006Q8NI28 216 aa10.55□□□□□ -0.72
PCDHB16-201ENST00000609684 CITED1Q99966 193 aa10.55□□□□□ -0.72
PCDHB16-201ENST00000609684 MRPS12O15235 138 aaKnown RBP10.55□□□□□ -0.72
PCDHB16-201ENST00000609684 HIGD2BQ4VC39 106 aa10.55□□□□□ -0.72
PCDHB16-201ENST00000609684 SETD2Q9BYW2 2564 aaPredicted RBP10.54□□□□□ -0.72
PCDHB16-201ENST00000609684 JMJD7-PLA2G4BH0Y9G9 81 aa10.54□□□□□ -0.72
PCDHB16-201ENST00000609684 COL5A1P20908 1838 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms