RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 WRBO00258 174 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 TNFAIP8O95379 198 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 APOA1P02647 267 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 PYYP10082 97 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 UBE2D3P61077 147 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 UBE2D2P62837 147 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 ASB16-AS1Q495Z4 193 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 C5orf47Q569G3 176 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 C10orf113Q5VZT2 155 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 NTM-AS1Q6ZSK4 140 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 SLC51BQ86UW2 128 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 OR2T35Q8NGX2 323 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 URGCP-MRPS24S4R325 110 aa2.39□□□□□ -2.03
VRK3-222ENST00000601324 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.38□□□□□ -2.03
VRK3-222ENST00000601324 COX7A2P2O60397 106 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 ANGP03950 147 aaKnown RBP2.38□□□□□ -2.03
VRK3-222ENST00000601324 IGLV7-43P04211 117 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 S100A6P06703 90 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 AQP4P55087 323 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 RBX1P62877 108 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 SCGB2B2Q4G0G5 96 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 MIC13Q5XKP0 118 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 LINC00269Q8N2A0 174 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 LINC00469Q8N7U9 141 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 FER1L6-AS1Q8NA97 138 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 ATP5SQ99766 215 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 SLC25A2Q9BXI2 301 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
VRK3-222ENST00000601324 C14orf166Q9Y224 244 aaKnown RBP2.38□□□□□ -2.03
VRK3-222ENST00000601324 FLGP20930 4061 aaPredicted RBP2.38□□□□□ -2.03
VRK3-222ENST00000601324 NEBP20929 6669 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 TRAV21A0A0B4J279 112 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 SMCO3A2RU48 225 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 XKRY2A2RUG3 117 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 CRPP02741 224 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 METTL15P1P0C7V9 234 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 ZNF80P51504 273 aaPredicted RBP2.37□□□□□ -2.03
VRK3-222ENST00000601324 BCAP31P51572 246 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 RRAS2P62070 204 aaPredicted RBP2.37□□□□□ -2.03
VRK3-222ENST00000601324 DIRC1Q969H9 104 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 FXYD5Q96DB9 178 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 SMIM8Q96KF7 97 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 GGACTQ9BVM4 153 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 SLC39A9Q9NUM3 307 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 CCDC59Q9P031 241 aaKnown RBP2.37□□□□□ -2.03
VRK3-222ENST00000601324 NAGKQ9UJ70 344 aa2.37□□□□□ -2.03
VRK3-222ENST00000601324 CARHSP1Q9Y2V2 147 aaKnown RBP2.37□□□□□ -2.03
VRK3-222ENST00000601324 GVQW2A0A096LPI5 108 aaPredicted RBP2.36□□□□□ -2.03
VRK3-222ENST00000601324 TRBV10-1A0A0K0K1A3 114 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 LOC100506127A0A0U1RQW1 187 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 A8MWV9 139 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 F6UZH7 168 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 HPGDSO60760 199 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 TSPAN13O95857 204 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 IFNA7P01567 189 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 NBEAP1P0C6P0 100 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 GZMBP10144 247 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 CRYGAP11844 174 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 GABARAPL2P60520 117 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 GCSAMLQ5JQS6 135 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 FAM162BQ5T6X4 162 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 Q5W150 140 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 CLPSL2Q6UWE3 100 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 CLVS1Q8IUQ0 354 aaPredicted RBP2.36□□□□□ -2.03
VRK3-222ENST00000601324 ASB13Q8WXK3 278 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 DIRAS2Q96HU8 199 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 KCNS1Q96KK3 526 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 C11orf1Q9H5F2 150 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 PSENENQ9NZ42 101 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 LINC00474Q9P2X8 69 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 TIMM9Q9Y5J7 89 aa2.36□□□□□ -2.03
VRK3-222ENST00000601324 TRBV7-3A0A075B6L6 115 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 TRAV8-4A0A0B4J246 113 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 TRAV1-1A0A0B4J248 108 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 TMEM262E9PQX1 116 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 PTTG1O95997 202 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 P01737 135 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 TAS2R30P59541 319 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 SSBP1Q04837 148 aaKnown RBP2.35□□□□□ -2.03
VRK3-222ENST00000601324 SYCNQ0VAF6 134 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 MOBPQ13875 183 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 RGS21Q2M5E4 152 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 C1orf137Q5JT78 98 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 RETNLBQ9BQ08 111 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 MRPS26Q9BYN8 205 aaKnown RBP2.35□□□□□ -2.03
VRK3-222ENST00000601324 COMMD3Q9UBI1 195 aa2.35□□□□□ -2.03
VRK3-222ENST00000601324 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
VRK3-222ENST00000601324 CCDC160A6NGH7 325 aa2.34□□□□□ -2.03
VRK3-222ENST00000601324 DISC1C4P0D8 188 aa2.34□□□□□ -2.03
VRK3-222ENST00000601324 SFT2D2O95562 160 aa2.34□□□□□ -2.03
VRK3-222ENST00000601324 S100A12P80511 92 aa2.34□□□□□ -2.03
VRK3-222ENST00000601324 IQCJQ1A5X6 159 aa2.34□□□□□ -2.03
VRK3-222ENST00000601324 DNLZQ5SXM8 178 aa2.34□□□□□ -2.03
VRK3-222ENST00000601324 MIR17HGQ75NE6 70 aa2.34□□□□□ -2.03
VRK3-222ENST00000601324 PHF5AQ7RTV0 110 aaKnown RBP2.34□□□□□ -2.03
VRK3-222ENST00000601324 C12orf45Q8N5I9 185 aaPredicted RBP2.34□□□□□ -2.03
VRK3-222ENST00000601324 MITD1Q8WV92 249 aa2.34□□□□□ -2.03
VRK3-222ENST00000601324 SMIM4Q8WVI0 70 aa2.34□□□□□ -2.03
VRK3-222ENST00000601324 PFDN5Q99471 154 aa2.34□□□□□ -2.03
VRK3-222ENST00000601324 PRRT1Q99946 306 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms