RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 KRTAP29-1A8MX34 341 aaPredicted RBP11.66□□□□□ -0.54
H3F3B-209ENST00000589949 M0QY20 66 aa11.66□□□□□ -0.54
H3F3B-209ENST00000589949 SCO1O75880 301 aa11.66□□□□□ -0.54
H3F3B-209ENST00000589949 PRSS1P07477 247 aa11.66□□□□□ -0.54
H3F3B-209ENST00000589949 RBX1P62877 108 aa11.66□□□□□ -0.54
H3F3B-209ENST00000589949 GAGE6Q13070 117 aa11.66□□□□□ -0.54
H3F3B-209ENST00000589949 CLPSL2Q6UWE3 100 aa11.66□□□□□ -0.54
H3F3B-209ENST00000589949 PRR34Q9NV39 138 aa11.66□□□□□ -0.54
H3F3B-209ENST00000589949 TMEM242Q9NWH2 141 aa11.66□□□□□ -0.54
H3F3B-209ENST00000589949 C19orf71A6NCJ1 209 aa11.65□□□□□ -0.54
H3F3B-209ENST00000589949 PPP1R2P9O14990 202 aa11.65□□□□□ -0.54
H3F3B-209ENST00000589949 HLA-DQA1P01909 254 aa11.65□□□□□ -0.54
H3F3B-209ENST00000589949 CRPP02741 224 aa11.65□□□□□ -0.54
H3F3B-209ENST00000589949 DEFB104AQ8WTQ1 72 aa11.65□□□□□ -0.54
H3F3B-209ENST00000589949 AP1S3Q96PC3 154 aa11.65□□□□□ -0.54
H3F3B-209ENST00000589949 FAM231DQ6ZW35 169 aa11.64□□□□□ -0.55
H3F3B-209ENST00000589949 LINC00269Q8N2A0 174 aa11.64□□□□□ -0.55
H3F3B-209ENST00000589949 OR2D3Q8NGH3 330 aa11.64□□□□□ -0.55
H3F3B-209ENST00000589949 TPPP3Q9BW30 176 aa11.64□□□□□ -0.55
H3F3B-209ENST00000589949 OSTCQ9NRP0 149 aa11.64□□□□□ -0.55
H3F3B-209ENST00000589949 MIAQ16674 131 aa11.63□□□□□ -0.55
H3F3B-209ENST00000589949 SUMO4Q6EEV6 95 aa11.63□□□□□ -0.55
H3F3B-209ENST00000589949 FER1L6-AS1Q8NA97 138 aa11.63□□□□□ -0.55
H3F3B-209ENST00000589949 SMCO4Q9NRQ5 59 aa11.63□□□□□ -0.55
H3F3B-209ENST00000589949 MGPP08493 103 aa11.62□□□□□ -0.55
H3F3B-209ENST00000589949 SMIM17P0DL12 118 aa11.62□□□□□ -0.55
H3F3B-209ENST00000589949 IQCJQ1A5X6 159 aa11.62□□□□□ -0.55
H3F3B-209ENST00000589949 C14orf177Q52M58 125 aa11.62□□□□□ -0.55
H3F3B-209ENST00000589949 PANO1I0J062 215 aa11.61□□□□□ -0.55
H3F3B-209ENST00000589949 TMEM97Q5BJF2 176 aa11.61□□□□□ -0.55
H3F3B-209ENST00000589949 GFRA4Q9GZZ7 299 aa11.61□□□□□ -0.55
H3F3B-209ENST00000589949 RNASE7Q9H1E1 156 aaKnown RBP11.61□□□□□ -0.55
H3F3B-209ENST00000589949 TRBV25-1A0A075B6N4 114 aa11.6□□□□□ -0.55
H3F3B-209ENST00000589949 C20orf203Q8NBC4 194 aa11.6□□□□□ -0.55
H3F3B-209ENST00000589949 NUDT10Q8NFP7 164 aa11.6□□□□□ -0.55
H3F3B-209ENST00000589949 DAZAP1Q96EP5 407 aaKnown RBP11.6□□□□□ -0.55
H3F3B-209ENST00000589949 NUDT11Q96G61 164 aa11.6□□□□□ -0.55
H3F3B-209ENST00000589949 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.6□□□□□ -0.55
H3F3B-209ENST00000589949 IGLV4-60A0A075B6I1 120 aa11.59□□□□□ -0.55
H3F3B-209ENST00000589949 IGLV10-54A0A075B6I4 117 aa11.59□□□□□ -0.55
H3F3B-209ENST00000589949 IGHV1-24A0A0C4DH33 117 aa11.59□□□□□ -0.55
H3F3B-209ENST00000589949 GATCO43716 136 aaKnown RBP11.59□□□□□ -0.55
H3F3B-209ENST00000589949 PKIAP61925 76 aa11.59□□□□□ -0.55
H3F3B-209ENST00000589949 LYZL1Q6UWQ5 148 aa11.59□□□□□ -0.55
H3F3B-209ENST00000589949 CBLN2Q8IUK8 224 aa11.59□□□□□ -0.55
H3F3B-209ENST00000589949 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.59□□□□□ -0.55
H3F3B-209ENST00000589949 IMMP2LQ96T52 175 aa11.59□□□□□ -0.55
H3F3B-209ENST00000589949 V9GYV3 84 aa11.59□□□□□ -0.55
H3F3B-209ENST00000589949 HNRNPA3P51991 378 aaKnown RBP11.58□□□□□ -0.56
H3F3B-209ENST00000589949 RPS20P60866 119 aaKnown RBP11.58□□□□□ -0.56
H3F3B-209ENST00000589949 CACNG7P62955 275 aa11.58□□□□□ -0.56
H3F3B-209ENST00000589949 C9orf163Q8N9P6 203 aa11.58□□□□□ -0.56
H3F3B-209ENST00000589949 FAT3Q8TDW7 4589 aa11.58□□□□□ -0.56
H3F3B-209ENST00000589949 P01737 135 aa11.57□□□□□ -0.56
H3F3B-209ENST00000589949 NTF3P20783 257 aa11.57□□□□□ -0.56
H3F3B-209ENST00000589949 REG3AQ06141 175 aa11.57□□□□□ -0.56
H3F3B-209ENST00000589949 DGAT2L7PQ6IED9 249 aa11.57□□□□□ -0.56
H3F3B-209ENST00000589949 S100PP25815 95 aa11.56□□□□□ -0.56
H3F3B-209ENST00000589949 CT83Q5H943 113 aa11.56□□□□□ -0.56
H3F3B-209ENST00000589949 RASL11AQ6T310 242 aa11.56□□□□□ -0.56
H3F3B-209ENST00000589949 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
H3F3B-209ENST00000589949 RPP21Q9H633 154 aaKnown RBP11.56□□□□□ -0.56
H3F3B-209ENST00000589949 F2Z2F3 143 aa11.55□□□□□ -0.56
H3F3B-209ENST00000589949 H7C1H1 209 aa11.55□□□□□ -0.56
H3F3B-209ENST00000589949 SLPIP03973 132 aa11.55□□□□□ -0.56
H3F3B-209ENST00000589949 YPEL4Q96NS1 127 aa11.55□□□□□ -0.56
H3F3B-209ENST00000589949 PKHD1L1Q86WI1 4243 aa11.54□□□□□ -0.56
H3F3B-209ENST00000589949 A8MWL6 223 aa11.54□□□□□ -0.56
H3F3B-209ENST00000589949 CTRLP40313 264 aa11.54□□□□□ -0.56
H3F3B-209ENST00000589949 TMEM243Q9BU79 118 aa11.54□□□□□ -0.56
H3F3B-209ENST00000589949 NIT2Q9NQR4 276 aa11.54□□□□□ -0.56
H3F3B-209ENST00000589949 A0A1B0GUV1 79 aa11.53□□□□□ -0.56
H3F3B-209ENST00000589949 COLCA2A8K830 154 aa11.53□□□□□ -0.56
H3F3B-209ENST00000589949 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
H3F3B-209ENST00000589949 TSKUQ8WUA8 353 aa11.53□□□□□ -0.56
H3F3B-209ENST00000589949 DPH3P1Q9H4G8 78 aa11.53□□□□□ -0.56
H3F3B-209ENST00000589949 TRAV9-1A0A075B6T8 112 aa11.52□□□□□ -0.57
H3F3B-209ENST00000589949 SMIM27A0A1W2PRY6 76 aa11.52□□□□□ -0.57
H3F3B-209ENST00000589949 TRGC1P0CF51 173 aa11.52□□□□□ -0.57
H3F3B-209ENST00000589949 PGLYRP4Q96LB8 373 aa11.52□□□□□ -0.57
H3F3B-209ENST00000589949 HMCN2Q8NDA2 5059 aa11.51□□□□□ -0.57
H3F3B-209ENST00000589949 TRBV24-1A0A075B6N3 115 aa11.51□□□□□ -0.57
H3F3B-209ENST00000589949 TRAV26-2A0A0B4J265 109 aa11.51□□□□□ -0.57
H3F3B-209ENST00000589949 XKRY2A2RUG3 117 aa11.51□□□□□ -0.57
H3F3B-209ENST00000589949 FAM231BA6NCW3 169 aa11.51□□□□□ -0.57
H3F3B-209ENST00000589949 FOXA3P55318 350 aaPredicted RBP11.51□□□□□ -0.57
H3F3B-209ENST00000589949 CNBPP62633 177 aaKnown RBP11.51□□□□□ -0.57
H3F3B-209ENST00000589949 GATD1Q8NB37 220 aa11.51□□□□□ -0.57
H3F3B-209ENST00000589949 BTF3L4Q96K17 158 aa11.51□□□□□ -0.57
H3F3B-209ENST00000589949 CNFNQ9BYD5 112 aa11.51□□□□□ -0.57
H3F3B-209ENST00000589949 TGIF2-C20orf24A0A0A6YYL0 155 aa11.5□□□□□ -0.57
H3F3B-209ENST00000589949 OXTP01178 125 aa11.5□□□□□ -0.57
H3F3B-209ENST00000589949 WDR73Q6P4I2 378 aa11.5□□□□□ -0.57
H3F3B-209ENST00000589949 GTSF1Q8WW33 167 aa11.5□□□□□ -0.57
H3F3B-209ENST00000589949 TRAV8-4A0A0B4J246 113 aa11.49□□□□□ -0.57
H3F3B-209ENST00000589949 hDV102S1A0JD36 115 aa11.49□□□□□ -0.57
H3F3B-209ENST00000589949 CIRBPQ14011 172 aaKnown RBP11.49□□□□□ -0.57
H3F3B-209ENST00000589949 TWIST1Q15672 202 aa11.49□□□□□ -0.57
H3F3B-209ENST00000589949 NAT8BQ9UHF3 227 aa11.49□□□□□ -0.57
H3F3B-209ENST00000589949 CHTF8P0CG12 524 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms