RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PRR34Q9NV39 138 aa9.72□□□□□ -0.85
VAPA-209ENST00000585042 A8MWL6 223 aa9.71□□□□□ -0.86
VAPA-209ENST00000585042 USP17L23D6RBM5 183 aa9.71□□□□□ -0.86
VAPA-209ENST00000585042 TRGC1P0CF51 173 aa9.71□□□□□ -0.86
VAPA-209ENST00000585042 TMEM241Q24JQ0 296 aa9.71□□□□□ -0.86
VAPA-209ENST00000585042 LCE2AQ5TA79 106 aaPredicted RBP9.71□□□□□ -0.86
VAPA-209ENST00000585042 LYZL1Q6UWQ5 148 aa9.71□□□□□ -0.86
VAPA-209ENST00000585042 C9orf163Q8N9P6 203 aa9.71□□□□□ -0.86
VAPA-209ENST00000585042 LINC01551Q86U37 167 aa9.7□□□□□ -0.86
VAPA-209ENST00000585042 CLRN3Q8NCR9 226 aa9.7□□□□□ -0.86
VAPA-209ENST00000585042 H7C1H1 209 aa9.69□□□□□ -0.86
VAPA-209ENST00000585042 PRSS1P07477 247 aa9.69□□□□□ -0.86
VAPA-209ENST00000585042 CTRLP40313 264 aa9.69□□□□□ -0.86
VAPA-209ENST00000585042 RPL37AP61513 92 aaKnown RBP9.69□□□□□ -0.86
VAPA-209ENST00000585042 CT83Q5H943 113 aa9.69□□□□□ -0.86
VAPA-209ENST00000585042 NTM-AS1Q6ZSK4 140 aa9.69□□□□□ -0.86
VAPA-209ENST00000585042 SMIM15Q7Z3B0 74 aa9.69□□□□□ -0.86
VAPA-209ENST00000585042 BORCS7Q96B45 105 aa9.69□□□□□ -0.86
VAPA-209ENST00000585042 KIF25-AS1Q9Y6Z4 181 aa9.69□□□□□ -0.86
VAPA-209ENST00000585042 TRBV25-1A0A075B6N4 114 aa9.68□□□□□ -0.86
VAPA-209ENST00000585042 NTF3P20783 257 aa9.68□□□□□ -0.86
VAPA-209ENST00000585042 RBX1P62877 108 aa9.68□□□□□ -0.86
VAPA-209ENST00000585042 TWIST1Q15672 202 aa9.68□□□□□ -0.86
VAPA-209ENST00000585042 IQCJQ1A5X6 159 aa9.68□□□□□ -0.86
VAPA-209ENST00000585042 KRTAP26-1Q6PEX3 210 aa9.68□□□□□ -0.86
VAPA-209ENST00000585042 OSTCQ9NRP0 149 aa9.68□□□□□ -0.86
VAPA-209ENST00000585042 NAT8Q9UHE5 227 aa9.68□□□□□ -0.86
VAPA-209ENST00000585042 HLA-DQA1P01909 254 aa9.67□□□□□ -0.86
VAPA-209ENST00000585042 MGPP08493 103 aa9.67□□□□□ -0.86
VAPA-209ENST00000585042 LINC00269Q8N2A0 174 aa9.67□□□□□ -0.86
VAPA-209ENST00000585042 TRAV8-4A0A0B4J246 113 aa9.66□□□□□ -0.86
VAPA-209ENST00000585042 IGHV1-24A0A0C4DH33 117 aa9.66□□□□□ -0.86
VAPA-209ENST00000585042 TMEM238LA0A1B0GVL6 79 aa9.66□□□□□ -0.86
VAPA-209ENST00000585042 FAM231BA6NCW3 169 aa9.66□□□□□ -0.86
VAPA-209ENST00000585042 SDIM1Q6ZPB5 146 aa9.66□□□□□ -0.86
VAPA-209ENST00000585042 CNFNQ9BYD5 112 aa9.66□□□□□ -0.86
VAPA-209ENST00000585042 DPH3P1Q9H4G8 78 aa9.66□□□□□ -0.86
VAPA-209ENST00000585042 A0A1B0GUV1 79 aa9.65□□□□□ -0.86
VAPA-209ENST00000585042 ADIRFQ15847 76 aa9.65□□□□□ -0.86
VAPA-209ENST00000585042 TSKUQ8WUA8 353 aa9.65□□□□□ -0.86
VAPA-209ENST00000585042 GFRA4Q9GZZ7 299 aa9.65□□□□□ -0.86
VAPA-209ENST00000585042 LRP1Q07954 4544 aaKnown RBP9.64□□□□□ -0.87
VAPA-209ENST00000585042 C9JQL5 133 aa9.64□□□□□ -0.87
VAPA-209ENST00000585042 M0QY20 66 aa9.64□□□□□ -0.87
VAPA-209ENST00000585042 FOXA3P55318 350 aaPredicted RBP9.64□□□□□ -0.87
VAPA-209ENST00000585042 CNBPP62633 177 aaKnown RBP9.64□□□□□ -0.87
VAPA-209ENST00000585042 RPL23P62829 140 aaKnown RBP9.64□□□□□ -0.87
VAPA-209ENST00000585042 SRSF3P84103 164 aaKnown RBP9.64□□□□□ -0.87
VAPA-209ENST00000585042 IFITM2Q01629 132 aa9.64□□□□□ -0.87
VAPA-209ENST00000585042 REG3AQ06141 175 aa9.64□□□□□ -0.87
VAPA-209ENST00000585042 GAGE6Q13070 117 aa9.64□□□□□ -0.87
VAPA-209ENST00000585042 GTSF1Q8WW33 167 aa9.64□□□□□ -0.87
VAPA-209ENST00000585042 ISOC2Q96AB3 205 aa9.64□□□□□ -0.87
VAPA-209ENST00000585042 PGLYRP4Q96LB8 373 aa9.64□□□□□ -0.87
VAPA-209ENST00000585042 CIRBPQ14011 172 aaKnown RBP9.63□□□□□ -0.87
VAPA-209ENST00000585042 CLLU1Q5K131 121 aa9.63□□□□□ -0.87
VAPA-209ENST00000585042 PLA2G2DQ9UNK4 145 aa9.63□□□□□ -0.87
VAPA-209ENST00000585042 A0A1B0GUT8 65 aa9.62□□□□□ -0.87
VAPA-209ENST00000585042 HIGD1CA8MV81 97 aa9.62□□□□□ -0.87
VAPA-209ENST00000585042 SUMO4Q6EEV6 95 aa9.62□□□□□ -0.87
VAPA-209ENST00000585042 RASL11AQ6T310 242 aa9.62□□□□□ -0.87
VAPA-209ENST00000585042 Q6ZRU5 148 aa9.62□□□□□ -0.87
VAPA-209ENST00000585042 RNF185Q96GF1 192 aa9.62□□□□□ -0.87
VAPA-209ENST00000585042 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.62□□□□□ -0.87
VAPA-209ENST00000585042 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.6□□□□□ -0.87
VAPA-209ENST00000585042 RIGQ13278 110 aa9.6□□□□□ -0.87
VAPA-209ENST00000585042 CLPSL2Q6UWE3 100 aa9.6□□□□□ -0.87
VAPA-209ENST00000585042 C20orf203Q8NBC4 194 aa9.6□□□□□ -0.87
VAPA-209ENST00000585042 TMEM243Q9BU79 118 aa9.6□□□□□ -0.87
VAPA-209ENST00000585042 NIT2Q9NQR4 276 aa9.6□□□□□ -0.87
VAPA-209ENST00000585042 AP5S1Q9NUS5 200 aa9.6□□□□□ -0.87
VAPA-209ENST00000585042 NAT8BQ9UHF3 227 aa9.6□□□□□ -0.87
VAPA-209ENST00000585042 V9GYV3 84 aa9.6□□□□□ -0.87
VAPA-209ENST00000585042 IGHV3-64A0A075B6Q5 118 aa9.59□□□□□ -0.87
VAPA-209ENST00000585042 hDV102S1A0JD36 115 aa9.59□□□□□ -0.87
VAPA-209ENST00000585042 HNRNPA3P51991 378 aaKnown RBP9.59□□□□□ -0.87
VAPA-209ENST00000585042 PANO1I0J062 215 aa9.58□□□□□ -0.88
VAPA-209ENST00000585042 PNRC1Q12796 327 aaPredicted RBP9.58□□□□□ -0.88
VAPA-209ENST00000585042 IGLV4-60A0A075B6I1 120 aa9.57□□□□□ -0.88
VAPA-209ENST00000585042 IGLV10-54A0A075B6I4 117 aa9.57□□□□□ -0.88
VAPA-209ENST00000585042 PPP1R2P9O14990 202 aa9.57□□□□□ -0.88
VAPA-209ENST00000585042 NUP35Q8NFH5 326 aa9.57□□□□□ -0.88
VAPA-209ENST00000585042 DPH3Q96FX2 82 aa9.57□□□□□ -0.88
VAPA-209ENST00000585042 TMEM191AQ9H0A3 160 aa9.57□□□□□ -0.88
VAPA-209ENST00000585042 FAT3Q8TDW7 4589 aa9.56□□□□□ -0.88
VAPA-209ENST00000585042 A0A1B0GW15 77 aa9.56□□□□□ -0.88
VAPA-209ENST00000585042 UBE2L6O14933 153 aa9.56□□□□□ -0.88
VAPA-209ENST00000585042 CFAP161Q6P656 301 aa9.56□□□□□ -0.88
VAPA-209ENST00000585042 UQCC3Q6UW78 93 aa9.56□□□□□ -0.88
VAPA-209ENST00000585042 SMIM27A0A1W2PRY6 76 aa9.55□□□□□ -0.88
VAPA-209ENST00000585042 S100A8P05109 93 aa9.55□□□□□ -0.88
VAPA-209ENST00000585042 MT1HL1P0DM35 61 aa9.55□□□□□ -0.88
VAPA-209ENST00000585042 COTL1Q14019 142 aa9.55□□□□□ -0.88
VAPA-209ENST00000585042 NDUFA5Q16718 116 aa9.55□□□□□ -0.88
VAPA-209ENST00000585042 GATD1Q8NB37 220 aa9.55□□□□□ -0.88
VAPA-209ENST00000585042 HMCN2Q8NDA2 5059 aa9.55□□□□□ -0.88
VAPA-209ENST00000585042 A0A087WYN8 130 aa9.54□□□□□ -0.88
VAPA-209ENST00000585042 MT-ND4LP03901 98 aa9.54□□□□□ -0.88
VAPA-209ENST00000585042 SLPIP03973 132 aa9.54□□□□□ -0.88
VAPA-209ENST00000585042 PLAC8Q9NZF1 115 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms