RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 IGLC6P0CF74 106 aa11.85□□□□□ -0.51
TOP3A-220ENST00000585031 COA6Q5JTJ3 125 aaKnown RBP11.85□□□□□ -0.51
TOP3A-220ENST00000585031 MUC21Q5SSG8 566 aa11.85□□□□□ -0.51
TOP3A-220ENST00000585031 GATD1Q8NB37 220 aa11.84□□□□□ -0.51
TOP3A-220ENST00000585031 IGKV3D-20A0A0C4DH25 116 aa11.83□□□□□ -0.52
TOP3A-220ENST00000585031 IGHV3-16A0A0C4DH30 117 aa11.83□□□□□ -0.52
TOP3A-220ENST00000585031 GRIFINA4D1Z8 144 aa11.83□□□□□ -0.52
TOP3A-220ENST00000585031 KCNS1Q96KK3 526 aa11.83□□□□□ -0.52
TOP3A-220ENST00000585031 NAGKQ9UJ70 344 aa11.83□□□□□ -0.52
TOP3A-220ENST00000585031 RS1O15537 224 aa11.82□□□□□ -0.52
TOP3A-220ENST00000585031 S100A2P29034 98 aa11.82□□□□□ -0.52
TOP3A-220ENST00000585031 ASIPP42127 132 aa11.82□□□□□ -0.52
TOP3A-220ENST00000585031 CACNG7P62955 275 aa11.82□□□□□ -0.52
TOP3A-220ENST00000585031 BAALCQ8WXS3 180 aa11.82□□□□□ -0.52
TOP3A-220ENST00000585031 C11orf21Q9P2W6 132 aa11.82□□□□□ -0.52
TOP3A-220ENST00000585031 OR5AL1P0C617 328 aa11.81□□□□□ -0.52
TOP3A-220ENST00000585031 S100A4P26447 101 aaKnown RBP11.81□□□□□ -0.52
TOP3A-220ENST00000585031 AKR1D1P51857 326 aa11.81□□□□□ -0.52
TOP3A-220ENST00000585031 Q0VG73 95 aa11.81□□□□□ -0.52
TOP3A-220ENST00000585031 OR10J3Q5JRS4 329 aa11.81□□□□□ -0.52
TOP3A-220ENST00000585031 FAM159AQ6UWV7 190 aa11.81□□□□□ -0.52
TOP3A-220ENST00000585031 SSBP4Q9BWG4 385 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-220ENST00000585031 CNFNQ9BYD5 112 aa11.81□□□□□ -0.52
TOP3A-220ENST00000585031 TRAV4A0A0B4J268 109 aa11.8□□□□□ -0.52
TOP3A-220ENST00000585031 GATA1P15976 413 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-220ENST00000585031 TWIST1Q15672 202 aa11.8□□□□□ -0.52
TOP3A-220ENST00000585031 KIAA1644Q3SXP7 199 aa11.8□□□□□ -0.52
TOP3A-220ENST00000585031 TDRG1Q3Y452 100 aa11.8□□□□□ -0.52
TOP3A-220ENST00000585031 SMIM15Q7Z3B0 74 aa11.8□□□□□ -0.52
TOP3A-220ENST00000585031 BAGE3Q86Y29 109 aa11.8□□□□□ -0.52
TOP3A-220ENST00000585031 SNAI2O43623 268 aa11.79□□□□□ -0.52
TOP3A-220ENST00000585031 DNLZQ5SXM8 178 aa11.79□□□□□ -0.52
TOP3A-220ENST00000585031 HIST3H2BBQ8N257 126 aa11.79□□□□□ -0.52
TOP3A-220ENST00000585031 OR4C5Q8NGB2 326 aa11.79□□□□□ -0.52
TOP3A-220ENST00000585031 TM2D2Q9BX73 214 aa11.79□□□□□ -0.52
TOP3A-220ENST00000585031 TRAV8-6A0A0B4J262 113 aa11.78□□□□□ -0.52
TOP3A-220ENST00000585031 LAGE3Q14657 143 aa11.78□□□□□ -0.52
TOP3A-220ENST00000585031 SH2D6Q7Z4S9 175 aa11.78□□□□□ -0.52
TOP3A-220ENST00000585031 DNAJC30Q96LL9 226 aa11.78□□□□□ -0.52
TOP3A-220ENST00000585031 SPXQ9BT56 116 aa11.78□□□□□ -0.52
TOP3A-220ENST00000585031 H3BVH4 76 aa11.77□□□□□ -0.53
TOP3A-220ENST00000585031 NTF3P20783 257 aa11.77□□□□□ -0.53
TOP3A-220ENST00000585031 SPANXN1Q5VSR9 72 aa11.77□□□□□ -0.53
TOP3A-220ENST00000585031 ALKBH7Q9BT30 221 aaPredicted RBP11.77□□□□□ -0.53
TOP3A-220ENST00000585031 TMEM191AQ9H0A3 160 aa11.77□□□□□ -0.53
TOP3A-220ENST00000585031 GNRH2O43555 120 aa11.76□□□□□ -0.53
TOP3A-220ENST00000585031 RPL37AP61513 92 aaKnown RBP11.76□□□□□ -0.53
TOP3A-220ENST00000585031 LELP1Q5T871 98 aa11.76□□□□□ -0.53
TOP3A-220ENST00000585031 DAZ4Q86SG3 579 aaKnown RBP11.76□□□□□ -0.53
TOP3A-220ENST00000585031 SLC25A29Q8N8R3 303 aa11.76□□□□□ -0.53
TOP3A-220ENST00000585031 TMEM18Q96B42 140 aa11.76□□□□□ -0.53
TOP3A-220ENST00000585031 DAZ3Q9NR90 486 aaKnown RBP11.76□□□□□ -0.53
TOP3A-220ENST00000585031 MUC21A0A0G2JKD1 596 aa11.75□□□□□ -0.53
TOP3A-220ENST00000585031 MUC21A0A140T8X8 626 aa11.75□□□□□ -0.53
TOP3A-220ENST00000585031 SSTP61278 116 aa11.75□□□□□ -0.53
TOP3A-220ENST00000585031 PDZD11Q5EBL8 140 aa11.75□□□□□ -0.53
TOP3A-220ENST00000585031 FAM104BQ5XKR9 115 aa11.75□□□□□ -0.53
TOP3A-220ENST00000585031 PHLDA3Q9Y5J5 127 aa11.75□□□□□ -0.53
TOP3A-220ENST00000585031 TRGV11A0A075B6L2 103 aa11.74□□□□□ -0.53
TOP3A-220ENST00000585031 ESDP10768 282 aa11.74□□□□□ -0.53
TOP3A-220ENST00000585031 DMRTA1Q5VZB9 504 aa11.74□□□□□ -0.53
TOP3A-220ENST00000585031 C18orf32Q8TCD1 76 aa11.74□□□□□ -0.53
TOP3A-220ENST00000585031 OR10AG1Q8NH19 301 aa11.73□□□□□ -0.53
TOP3A-220ENST00000585031 M0R2P5 195 aa11.72□□□□□ -0.53
TOP3A-220ENST00000585031 SERF1AO75920 110 aa11.72□□□□□ -0.53
TOP3A-220ENST00000585031 PPBPP02775 128 aa11.72□□□□□ -0.53
TOP3A-220ENST00000585031 FABP4P15090 132 aa11.72□□□□□ -0.53
TOP3A-220ENST00000585031 AMN1Q8IY45 258 aa11.72□□□□□ -0.53
TOP3A-220ENST00000585031 ORMDL3Q8N138 153 aa11.72□□□□□ -0.53
TOP3A-220ENST00000585031 MRPL51Q4U2R6 128 aaKnown RBP11.71□□□□□ -0.53
TOP3A-220ENST00000585031 HIST1H2BLQ99880 126 aa11.71□□□□□ -0.53
TOP3A-220ENST00000585031 SAMD10Q9BYL1 202 aa11.71□□□□□ -0.53
TOP3A-220ENST00000585031 GTSF1LQ9H1H1 148 aa11.71□□□□□ -0.53
TOP3A-220ENST00000585031 TRAV8-3A0A0A6YYJ7 113 aa11.7□□□□□ -0.54
TOP3A-220ENST00000585031 IFITM10A6NMD0 228 aa11.7□□□□□ -0.54
TOP3A-220ENST00000585031 RNASE3P12724 160 aaKnown RBP11.7□□□□□ -0.54
TOP3A-220ENST00000585031 CKS2P33552 79 aa11.7□□□□□ -0.54
TOP3A-220ENST00000585031 ODF1Q14990 250 aa11.7□□□□□ -0.54
TOP3A-220ENST00000585031 OR10D4PQ8NGN7 298 aa11.7□□□□□ -0.54
TOP3A-220ENST00000585031 PACRGQ96M98 296 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-220ENST00000585031 PRELID3AQ96N28 172 aa11.7□□□□□ -0.54
TOP3A-220ENST00000585031 AP1S3Q96PC3 154 aa11.7□□□□□ -0.54
TOP3A-220ENST00000585031 LAMTOR2Q9Y2Q5 125 aa11.7□□□□□ -0.54
TOP3A-220ENST00000585031 IGHV3-73A0A0B4J1V6 119 aa11.69□□□□□ -0.54
TOP3A-220ENST00000585031 M0R381 172 aa11.69□□□□□ -0.54
TOP3A-220ENST00000585031 SMIM6P0DI80 62 aa11.69□□□□□ -0.54
TOP3A-220ENST00000585031 IQCJQ1A5X6 159 aa11.69□□□□□ -0.54
TOP3A-220ENST00000585031 Q8N976 141 aa11.69□□□□□ -0.54
TOP3A-220ENST00000585031 ATP6V0E2Q8NHE4 81 aa11.69□□□□□ -0.54
TOP3A-220ENST00000585031 D6R8Y8 96 aa11.68□□□□□ -0.54
TOP3A-220ENST00000585031 RAB4AP20338 218 aa11.68□□□□□ -0.54
TOP3A-220ENST00000585031 CFAP126Q5VTH2 177 aa11.68□□□□□ -0.54
TOP3A-220ENST00000585031 Q6ZRU5 148 aa11.68□□□□□ -0.54
TOP3A-220ENST00000585031 CHCHD1Q96BP2 118 aaKnown RBP11.68□□□□□ -0.54
TOP3A-220ENST00000585031 C9orf85Q96MD7 179 aa11.68□□□□□ -0.54
TOP3A-220ENST00000585031 DPH3P1Q9H4G8 78 aa11.68□□□□□ -0.54
TOP3A-220ENST00000585031 Q9UF83 564 aa11.68□□□□□ -0.54
TOP3A-220ENST00000585031 HSBP1O75506 76 aa11.67□□□□□ -0.54
TOP3A-220ENST00000585031 SMIM17P0DL12 118 aa11.67□□□□□ -0.54
TOP3A-220ENST00000585031 LINC00310P59036 64 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms