RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 PCDH15Q96QU1 1955 aa12.35□□□□□ -0.43
ERBB2-214ENST00000583038 IL17DQ8TAD2 202 aa12.35□□□□□ -0.43
ERBB2-214ENST00000583038 C1orf229Q6ZS94 237 aaPredicted RBP12.35□□□□□ -0.43
ERBB2-214ENST00000583038 PSMB8P28062 276 aa12.34□□□□□ -0.43
ERBB2-214ENST00000583038 C22orf34Q6ZV56 151 aa12.34□□□□□ -0.43
ERBB2-214ENST00000583038 IGHV4-31P0DP07 118 aa12.34□□□□□ -0.43
ERBB2-214ENST00000583038 A0A1B0GX51 115 aa12.34□□□□□ -0.43
ERBB2-214ENST00000583038 UBE2AP49459 152 aa12.34□□□□□ -0.43
ERBB2-214ENST00000583038 NCOR2Q9Y618 2525 aa12.33□□□□□ -0.44
ERBB2-214ENST00000583038 ARHGAP21Q5T5U3 1957 aa12.33□□□□□ -0.44
ERBB2-214ENST00000583038 B5MCH6 92 aa12.33□□□□□ -0.44
ERBB2-214ENST00000583038 HIGD2BQ4VC39 106 aa12.33□□□□□ -0.44
ERBB2-214ENST00000583038 ZFAND2AQ8N6M9 145 aa12.33□□□□□ -0.44
ERBB2-214ENST00000583038 C14orf177Q52M58 125 aa12.33□□□□□ -0.44
ERBB2-214ENST00000583038 GDF5OSQ5U4N7 250 aa12.33□□□□□ -0.44
ERBB2-214ENST00000583038 Q6ZTI0 123 aa12.33□□□□□ -0.44
ERBB2-214ENST00000583038 DSCAMO60469 2012 aa12.33□□□□□ -0.44
ERBB2-214ENST00000583038 C19orf84I3L1E1 186 aa12.33□□□□□ -0.44
ERBB2-214ENST00000583038 HIST2H2BDQ6DRA6 164 aa12.33□□□□□ -0.44
ERBB2-214ENST00000583038 A0A0J9YXY3 114 aa12.32□□□□□ -0.44
ERBB2-214ENST00000583038 NCR3O14931 201 aa12.32□□□□□ -0.44
ERBB2-214ENST00000583038 C11orf71Q6IPW1 123 aa12.32□□□□□ -0.44
ERBB2-214ENST00000583038 NEXN-AS1Q8NBZ9 246 aa12.32□□□□□ -0.44
ERBB2-214ENST00000583038 DEFB4AO15263 64 aa12.31□□□□□ -0.44
ERBB2-214ENST00000583038 IGKV3D-7A0A0C4DH55 119 aa12.31□□□□□ -0.44
ERBB2-214ENST00000583038 NFE4Q86UQ8 179 aa12.3□□□□□ -0.44
ERBB2-214ENST00000583038 CLEC2BQ92478 149 aa12.3□□□□□ -0.44
ERBB2-214ENST00000583038 FAM236AA0A1B0GUQ0 79 aa12.3□□□□□ -0.44
ERBB2-214ENST00000583038 FAM236BA0A1B0GV22 79 aa12.3□□□□□ -0.44
ERBB2-214ENST00000583038 COX7BP24311 80 aa12.3□□□□□ -0.44
ERBB2-214ENST00000583038 ALPK3Q96L96 1907 aa12.29□□□□□ -0.44
ERBB2-214ENST00000583038 LINC00643Q86TS7 51 aa12.29□□□□□ -0.44
ERBB2-214ENST00000583038 CEMP1Q6PRD7 247 aaPredicted RBP12.29□□□□□ -0.44
ERBB2-214ENST00000583038 RNASE8Q8TDE3 154 aaKnown RBP12.29□□□□□ -0.44
ERBB2-214ENST00000583038 TP53TG3Q9ULZ0 132 aa12.29□□□□□ -0.44
ERBB2-214ENST00000583038 ABCA2Q9BZC7 2435 aa12.28□□□□□ -0.44
ERBB2-214ENST00000583038 C11orf45Q8TAV5 145 aa12.28□□□□□ -0.44
ERBB2-214ENST00000583038 IGHV4-28A0A0C4DH34 117 aa12.28□□□□□ -0.44
ERBB2-214ENST00000583038 REG3AQ06141 175 aa12.28□□□□□ -0.44
ERBB2-214ENST00000583038 FAM222AQ5U5X8 452 aa12.28□□□□□ -0.44
ERBB2-214ENST00000583038 SPANXB1Q9NS25 103 aaPredicted RBP12.27□□□□□ -0.44
ERBB2-214ENST00000583038 TRBV6-5A0A0K0K1A5 114 aa12.27□□□□□ -0.45
ERBB2-214ENST00000583038 PCNX3Q9H6A9 2034 aa12.27□□□□□ -0.45
ERBB2-214ENST00000583038 KIAA1549LQ6ZVL6 1849 aa12.27□□□□□ -0.45
ERBB2-214ENST00000583038 TRAV26-1A0A087WT03 109 aa12.27□□□□□ -0.45
ERBB2-214ENST00000583038 TRBV6-4A0A1B0GX49 114 aa12.27□□□□□ -0.45
ERBB2-214ENST00000583038 Q8N6K4 173 aa12.27□□□□□ -0.45
ERBB2-214ENST00000583038 U3KQK5 164 aa12.27□□□□□ -0.45
ERBB2-214ENST00000583038 CDKN2A-AS1Q9UH64 79 aa12.27□□□□□ -0.45
ERBB2-214ENST00000583038 IGLV4-3A0A075B6K6 122 aa12.26□□□□□ -0.45
ERBB2-214ENST00000583038 IBA57-AS1B1ANH7 110 aa12.26□□□□□ -0.45
ERBB2-214ENST00000583038 ZNF22P17026 224 aaPredicted RBP12.26□□□□□ -0.45
ERBB2-214ENST00000583038 C20orf173Q96LM9 149 aa12.26□□□□□ -0.45
ERBB2-214ENST00000583038 DSCAML1Q8TD84 2053 aa12.26□□□□□ -0.45
ERBB2-214ENST00000583038 C10orf142B7Z368 130 aa12.26□□□□□ -0.45
ERBB2-214ENST00000583038 G3V4G9 280 aa12.26□□□□□ -0.45
ERBB2-214ENST00000583038 M0QY20 66 aa12.26□□□□□ -0.45
ERBB2-214ENST00000583038 IGF2RP11717 2491 aa12.26□□□□□ -0.45
ERBB2-214ENST00000583038 P0DMU3 169 aa12.26□□□□□ -0.45
ERBB2-214ENST00000583038 FAM231AP0DMU4 169 aa12.26□□□□□ -0.45
ERBB2-214ENST00000583038 FAM231CP0DMU5 169 aa12.26□□□□□ -0.45
ERBB2-214ENST00000583038 PYGO1Q9Y3Y4 419 aa12.26□□□□□ -0.45
ERBB2-214ENST00000583038 TRBV27A0A0K0K1C4 114 aa12.25□□□□□ -0.45
ERBB2-214ENST00000583038 Q6ZSV7 163 aa12.25□□□□□ -0.45
ERBB2-214ENST00000583038 LINC00467Q9BRT7 94 aa12.25□□□□□ -0.45
ERBB2-214ENST00000583038 CRIP1P50238 77 aa12.25□□□□□ -0.45
ERBB2-214ENST00000583038 DOPEY1Q5JWR5 2465 aa12.25□□□□□ -0.45
ERBB2-214ENST00000583038 MIFP14174 115 aa12.25□□□□□ -0.45
ERBB2-214ENST00000583038 LINC00269Q8N2A0 174 aa12.25□□□□□ -0.45
ERBB2-214ENST00000583038 PSMG3-AS1Q96PY0 264 aa12.25□□□□□ -0.45
ERBB2-214ENST00000583038 TLN1Q9Y490 2541 aaKnown RBP12.24□□□□□ -0.45
ERBB2-214ENST00000583038 TMEM223A0PJW6 202 aa12.24□□□□□ -0.45
ERBB2-214ENST00000583038 TCL1BO95988 128 aa12.24□□□□□ -0.45
ERBB2-214ENST00000583038 C4orf48Q5BLP8 95 aa12.24□□□□□ -0.45
ERBB2-214ENST00000583038 WFDC11Q8NEX6 87 aa12.23□□□□□ -0.45
ERBB2-214ENST00000583038 CHCHD10Q8WYQ3 142 aaPredicted RBP12.23□□□□□ -0.45
ERBB2-214ENST00000583038 CFAP126Q5VTH2 177 aa12.22□□□□□ -0.45
ERBB2-214ENST00000583038 YPEL4Q96NS1 127 aa12.22□□□□□ -0.45
ERBB2-214ENST00000583038 COL4A4P53420 1690 aaPredicted RBP12.22□□□□□ -0.45
ERBB2-214ENST00000583038 B9D2Q9BPU9 175 aa12.22□□□□□ -0.45
ERBB2-214ENST00000583038 TRBV6-8A0A0A6YYG3 113 aa12.21□□□□□ -0.45
ERBB2-214ENST00000583038 RNF185Q96GF1 192 aa12.21□□□□□ -0.45
ERBB2-214ENST00000583038 IGLV2-11P01706 119 aa12.21□□□□□ -0.45
ERBB2-214ENST00000583038 PIEZO2Q9H5I5 2752 aa12.2□□□□□ -0.46
ERBB2-214ENST00000583038 PLA2G5P39877 138 aa12.2□□□□□ -0.46
ERBB2-214ENST00000583038 PTH2Q96A98 100 aa12.2□□□□□ -0.46
ERBB2-214ENST00000583038 SHISA2Q6UWI4 295 aa12.19□□□□□ -0.46
ERBB2-214ENST00000583038 LINC00308Q8TCZ7 52 aa12.19□□□□□ -0.46
ERBB2-214ENST00000583038 HILS1P60008 231 aa12.19□□□□□ -0.46
ERBB2-214ENST00000583038 CHKB-CPT1BH3BT56 60 aa12.19□□□□□ -0.46
ERBB2-214ENST00000583038 TIMM17BO60830 172 aa12.19□□□□□ -0.46
ERBB2-214ENST00000583038 KLLNB2CW77 178 aa12.18□□□□□ -0.46
ERBB2-214ENST00000583038 WFDC9Q8NEX5 89 aa12.18□□□□□ -0.46
ERBB2-214ENST00000583038 SPATA25Q9BR10 227 aa12.18□□□□□ -0.46
ERBB2-214ENST00000583038 C14orf132Q9NPU4 83 aa12.18□□□□□ -0.46
ERBB2-214ENST00000583038 DEFB131BA0A096LNP1 70 aa12.18□□□□□ -0.46
ERBB2-214ENST00000583038 PIK3CD-AS1Q5SR53 167 aa12.18□□□□□ -0.46
ERBB2-214ENST00000583038 J3KT08 172 aa12.18□□□□□ -0.46
ERBB2-214ENST00000583038 ATP5EP2Q5VTU8 51 aa12.18□□□□□ -0.46
ERBB2-214ENST00000583038 TP73-AS1Q9UF72 201 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms