RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-208ENST00000563688 PIGBOS1A0A0B4J2F0 54 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 G3V318 75 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 PIN1P1O15428 100 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 HIST1H1DP16402 221 aaKnown RBP0.06□□□□□ -2.4
SCAPER-208ENST00000563688 S100A3P33764 101 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 BAGE3Q86Y29 109 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 PDCD10Q9BUL8 212 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 SPRR2GQ9BYE4 73 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 STARD9Q9P2P6 4700 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 LRP1Q07954 4544 aaKnown RBP0.06□□□□□ -2.4
SCAPER-208ENST00000563688 C2CD3Q4AC94 2353 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 DMDP11532 3685 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 RYR2Q92736 4967 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 ZMYM4Q5VZL5 1548 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 VPS13DQ5THJ4 4388 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 CMYA5Q8N3K9 4069 aa0.06□□□□□ -2.4
SCAPER-208ENST00000563688 PRKDCP78527 4128 aaKnown RBP0.06□□□□□ -2.4
SCAPER-208ENST00000563688 DSTQ03001 7570 aaKnown RBP0.06□□□□□ -2.4
SCAPER-208ENST00000563688 BIRC6Q9NR09 4857 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 SSPOA2VEC9 5147 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 TNXBP22105 4242 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 MUC3AQ02505 3323 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 PLECQ15149 4684 aaKnown RBP0.05□□□□□ -2.4
SCAPER-208ENST00000563688 NWD2Q9ULI1 1742 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 RELNP78509 3460 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 DNAH14Q0VDD8 3507 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 USP34Q70CQ2 3546 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 WDFY3Q8IZQ1 3526 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 BPTFQ12830 3046 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 DOPEY2Q9Y3R5 2298 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 FLGP20930 4061 aaPredicted RBP0.05□□□□□ -2.4
SCAPER-208ENST00000563688 A0A0D9SFI3 127 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 Q5VV11 94 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 COPS9Q8WXC6 57 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 SPANXDQ9BXN6 97 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 AGPAT4-IT1Q9H0P7 198 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 DNAH5Q8TE73 4624 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 HSPG2P98160 4391 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 CHD8Q9HCK8 2581 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 UBR4Q5T4S7 5183 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 KMT2CQ8NEZ4 4911 aaKnown RBP0.05□□□□□ -2.4
SCAPER-208ENST00000563688 VPS13BQ7Z7G8 4022 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 NCOR1O75376 2440 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 LRRC37A3O60309 1634 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 MYH7P12883 1935 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 SVEP1Q4LDE5 3571 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 DOPEY1Q5JWR5 2465 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 DNAH3Q8TD57 4116 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 PKHD1L1Q86WI1 4243 aa0.05□□□□□ -2.4
SCAPER-208ENST00000563688 SYNE2Q8WXH0 6885 aaKnown RBP0.04□□□□□ -2.4
SCAPER-208ENST00000563688 PKD1P98161 4303 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 FSIP2Q5CZC0 6907 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 CSMD2Q7Z408 3487 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 SONP18583 2426 aaKnown RBP0.04□□□□□ -2.4
SCAPER-208ENST00000563688 APOBP04114 4563 aaKnown RBP0.04□□□□□ -2.4
SCAPER-208ENST00000563688 DYNC1H1Q14204 4646 aaKnown RBP0.04□□□□□ -2.4
SCAPER-208ENST00000563688 HMGA1P17096 107 aaKnown RBP0.04□□□□□ -2.4
SCAPER-208ENST00000563688 DNAH9Q9NYC9 4486 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 DNAH6Q9C0G6 4158 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 LPAP08519 4548 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 MUC2Q02817 5179 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 SACSQ9NZJ4 4579 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 VPS13CQ709C8 3753 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 DNAH17Q9UFH2 4485 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 IFT172Q9UG01 1749 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 HERC1Q15751 4861 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 MYCBP2O75592 4640 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 DNAH1Q9P2D7 4330 aa0.04□□□□□ -2.4
SCAPER-208ENST00000563688 EPPK1P58107 5090 aaKnown RBP0.04□□□□□ -2.4
SCAPER-208ENST00000563688 PLXNB2O15031 1838 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 STAB1Q9NY15 2570 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 GRIN2AQ12879 1464 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 HERC2O95714 4834 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 RNF213Q63HN8 5207 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 ANKRD17O75179 2603 aaKnown RBP0.03□□□□□ -2.4
SCAPER-208ENST00000563688 SZT2Q5T011 3432 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 RYR1P21817 5038 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 ANK3Q12955 4377 aaKnown RBP0.03□□□□□ -2.4
SCAPER-208ENST00000563688 DNAH2Q9P225 4427 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 DNAH11Q96DT5 4516 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 SPINK4O60575 86 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 SPINK8P0C7L1 97 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 CCDC58Q4VC31 144 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 CFAP126Q5VTH2 177 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 CNFNQ9BYD5 112 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 NPVFQ9HCQ7 196 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 DYNC2H1Q8NCM8 4307 aaKnown RBP0.03□□□□□ -2.4
SCAPER-208ENST00000563688 KIAA1109Q2LD37 5005 aa0.03□□□□□ -2.4
SCAPER-208ENST00000563688 DOCK1Q14185 1865 aa0.03□□□□□ -2.41
SCAPER-208ENST00000563688 LAMA3Q16787 3333 aa0.03□□□□□ -2.41
SCAPER-208ENST00000563688 MYOM3Q5VTT5 1437 aa0.03□□□□□ -2.41
SCAPER-208ENST00000563688 CASKIN1Q8WXD9 1431 aa0.03□□□□□ -2.41
SCAPER-208ENST00000563688 CCDC141Q6ZP82 1450 aa0.03□□□□□ -2.41
SCAPER-208ENST00000563688 IFT140Q96RY7 1462 aa0.03□□□□□ -2.41
SCAPER-208ENST00000563688 MUC17Q685J3 4493 aa0.03□□□□□ -2.41
SCAPER-208ENST00000563688 DNAH10Q8IVF4 4471 aa0.03□□□□□ -2.41
SCAPER-208ENST00000563688 ABCA13Q86UQ4 5058 aa0.03□□□□□ -2.41
SCAPER-208ENST00000563688 STAB2Q8WWQ8 2551 aa0.02□□□□□ -2.41
SCAPER-208ENST00000563688 SETD2Q9BYW2 2564 aaPredicted RBP0.02□□□□□ -2.41
SCAPER-208ENST00000563688 HMCN2Q8NDA2 5059 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms