RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-208ENST00000563688 AEBP2Q6ZN18 517 aaPredicted RBP27.1■■□□□ 1.93
SCAPER-208ENST00000563688 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
SCAPER-208ENST00000563688 PHF23Q9BUL5 403 aaPredicted RBP23.01■■□□□ 1.27
SCAPER-208ENST00000563688 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
SCAPER-208ENST00000563688 FOXD1Q16676 465 aa21.4■■□□□ 1.02
SCAPER-208ENST00000563688 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
SCAPER-208ENST00000563688 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
SCAPER-208ENST00000563688 ADRA2BP18089 450 aa20.33■□□□□ 0.85
SCAPER-208ENST00000563688 PIAS4Q8N2W9 510 aaPredicted RBP20.05■□□□□ 0.8
SCAPER-208ENST00000563688 MSH5O43196 834 aa19.8■□□□□ 0.76
SCAPER-208ENST00000563688 POTEDQ86YR6 584 aa18.58■□□□□ 0.56
SCAPER-208ENST00000563688 SCAF1Q9H7N4 1312 aaKnown RBP18.55■□□□□ 0.56
SCAPER-208ENST00000563688 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
SCAPER-208ENST00000563688 PPP4R3CPQ6ZMV5 832 aa18.55■□□□□ 0.56
SCAPER-208ENST00000563688 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
SCAPER-208ENST00000563688 CNKSR2Q8WXI2 1034 aa18.09■□□□□ 0.49
SCAPER-208ENST00000563688 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
SCAPER-208ENST00000563688 HOXD11P31277 338 aaPredicted RBP17.85■□□□□ 0.45
SCAPER-208ENST00000563688 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
SCAPER-208ENST00000563688 KCNA4P22459 653 aa17.8■□□□□ 0.44
SCAPER-208ENST00000563688 NPM3O75607 178 aaKnown RBP17.72■□□□□ 0.43
SCAPER-208ENST00000563688 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
SCAPER-208ENST00000563688 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
SCAPER-208ENST00000563688 RNF39Q9H2S5 420 aa16.98■□□□□ 0.31
SCAPER-208ENST00000563688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.3
SCAPER-208ENST00000563688 SLC4A1APQ9BWU0 796 aaKnown RBP16.85■□□□□ 0.29
SCAPER-208ENST00000563688 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
SCAPER-208ENST00000563688 C1QBPQ07021 282 aaKnown RBP16.74■□□□□ 0.27
SCAPER-208ENST00000563688 CACNB1Q02641 598 aaPredicted RBP16.7■□□□□ 0.26
SCAPER-208ENST00000563688 U3KPZ7 1027 aaPredicted RBP16.68■□□□□ 0.26
SCAPER-208ENST00000563688 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
SCAPER-208ENST00000563688 ZBTB22O15209 634 aa16.39■□□□□ 0.21
SCAPER-208ENST00000563688 MYCNP04198 464 aaPredicted RBP16.34■□□□□ 0.21
SCAPER-208ENST00000563688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.32■□□□□ 0.2
SCAPER-208ENST00000563688 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
SCAPER-208ENST00000563688 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
SCAPER-208ENST00000563688 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
SCAPER-208ENST00000563688 CAPN15O75808 1086 aa16.2■□□□□ 0.18
SCAPER-208ENST00000563688 APLP2Q06481 763 aa16.18■□□□□ 0.18
SCAPER-208ENST00000563688 TRHP20396 242 aaPredicted RBP16.06■□□□□ 0.16
SCAPER-208ENST00000563688 DSG3P32926 999 aa16.06■□□□□ 0.16
SCAPER-208ENST00000563688 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
SCAPER-208ENST00000563688 ZNF219Q9P2Y4 722 aaPredicted RBP16.05■□□□□ 0.16
SCAPER-208ENST00000563688 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
SCAPER-208ENST00000563688 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
SCAPER-208ENST00000563688 ATXN8OSP0DMR3 200 aa15.91■□□□□ 0.14
SCAPER-208ENST00000563688 ABCB7O75027 752 aa15.87■□□□□ 0.13
SCAPER-208ENST00000563688 POLA2Q14181 598 aa15.77■□□□□ 0.12
SCAPER-208ENST00000563688 ZBTB12Q9Y330 459 aaPredicted RBP15.43■□□□□ 0.06
SCAPER-208ENST00000563688 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
SCAPER-208ENST00000563688 FBLN2P98095 1184 aa15.25■□□□□ 0.03
SCAPER-208ENST00000563688 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
SCAPER-208ENST00000563688 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
SCAPER-208ENST00000563688 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
SCAPER-208ENST00000563688 SPDYE6P0CI01 402 aa15.03■□□□□ -0
SCAPER-208ENST00000563688 SPDYE2Q495Y8 402 aa15.03■□□□□ -0
SCAPER-208ENST00000563688 AKT1S1Q96B36 256 aa15.03■□□□□ -0
SCAPER-208ENST00000563688 ZNF692Q9BU19 519 aaPredicted RBP14.92□□□□□ -0.02
SCAPER-208ENST00000563688 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
SCAPER-208ENST00000563688 REM2Q8IYK8 340 aaPredicted RBP14.9□□□□□ -0.02
SCAPER-208ENST00000563688 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
SCAPER-208ENST00000563688 SPDYE4A6NLX3 237 aa14.75□□□□□ -0.05
SCAPER-208ENST00000563688 PITPNM1O00562 1244 aa14.72□□□□□ -0.05
SCAPER-208ENST00000563688 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
SCAPER-208ENST00000563688 POTEHQ6S545 545 aa14.64□□□□□ -0.07
SCAPER-208ENST00000563688 SPDYE1Q8NFV5 336 aaPredicted RBP14.64□□□□□ -0.07
SCAPER-208ENST00000563688 CLEC11AQ9Y240 323 aa14.57□□□□□ -0.08
SCAPER-208ENST00000563688 FXR2P51116 673 aaKnown RBP eCLIP14.54□□□□□ -0.08
SCAPER-208ENST00000563688 PIP4P2Q8N4L2 257 aa14.53□□□□□ -0.08
SCAPER-208ENST00000563688 PROM2Q8N271 834 aa14.52□□□□□ -0.09
SCAPER-208ENST00000563688 FKBP8Q14318 412 aa14.47□□□□□ -0.09
SCAPER-208ENST00000563688 PRR29P0C7W0 189 aa14.42□□□□□ -0.1
SCAPER-208ENST00000563688 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
SCAPER-208ENST00000563688 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.12
SCAPER-208ENST00000563688 CHADLQ6NUI6 762 aa14.28□□□□□ -0.12
SCAPER-208ENST00000563688 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
SCAPER-208ENST00000563688 FARP1Q9Y4F1 1045 aaPredicted RBP14.13□□□□□ -0.15
SCAPER-208ENST00000563688 HAX1O00165 279 aa14.11□□□□□ -0.15
SCAPER-208ENST00000563688 MNX1P50219 401 aaPredicted RBP14.06□□□□□ -0.16
SCAPER-208ENST00000563688 EVX2Q03828 476 aa14.05□□□□□ -0.16
SCAPER-208ENST00000563688 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
SCAPER-208ENST00000563688 FBXO3Q9UK99 471 aa14.02□□□□□ -0.17
SCAPER-208ENST00000563688 MIER1Q8N108 512 aa14.01□□□□□ -0.17
SCAPER-208ENST00000563688 SP7Q8TDD2 431 aaPredicted RBP13.93□□□□□ -0.18
SCAPER-208ENST00000563688 PLCD3Q8N3E9 789 aa13.92□□□□□ -0.18
SCAPER-208ENST00000563688 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCAPER-208ENST00000563688 PLEKHG5O94827 1062 aa13.9□□□□□ -0.18
SCAPER-208ENST00000563688 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
SCAPER-208ENST00000563688 VASPP50552 380 aaPredicted RBP13.86□□□□□ -0.19
SCAPER-208ENST00000563688 ZBTB47Q9UFB7 747 aaPredicted RBP13.78□□□□□ -0.2
SCAPER-208ENST00000563688 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
SCAPER-208ENST00000563688 NUBP1P53384 320 aa13.73□□□□□ -0.21
SCAPER-208ENST00000563688 ZNF579Q8NAF0 562 aaKnown RBP13.73□□□□□ -0.21
SCAPER-208ENST00000563688 GABBR2O75899 941 aa13.72□□□□□ -0.21
SCAPER-208ENST00000563688 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
SCAPER-208ENST00000563688 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
SCAPER-208ENST00000563688 IFNLR1Q8IU57 520 aaPredicted RBP13.7□□□□□ -0.22
SCAPER-208ENST00000563688 TSPYL2Q9H2G4 693 aaPredicted RBP13.68□□□□□ -0.22
SCAPER-208ENST00000563688 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
SCAPER-208ENST00000563688 CLCN6P51797 869 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms