RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 LDLRAD2Q5SZI1 272 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 Q8N6K4 173 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 OR10P1Q8NGE3 313 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 C4orf3Q8WVX3 66 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 SLC39A9Q9NUM3 307 aa3.44□□□□□ -1.86
VPS35P1-201ENST00000563400 CR1P17927 2039 aa3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 AGRNO00468 2067 aa3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 IGHV1-58A0A0C4DH39 117 aa3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 A0A0J9YWU9 116 aa3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 CD24P25063 80 aa3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 BLCAPP62952 87 aa3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 DIAPH2-AS1Q14236 149 aa3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 ZNF79Q15937 498 aa3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 C10orf91Q5T1B1 145 aa3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 EIF5AL1Q6IS14 154 aaKnown RBP3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 TMEM14BQ9NUH8 114 aa3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 ZFP30Q9Y2G7 519 aa3.43□□□□□ -1.86
VPS35P1-201ENST00000563400 LRBAP50851 2863 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 C2CD3Q4AC94 2353 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 ABCA2Q9BZC7 2435 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 SPENQ96T58 3664 aaKnown RBP3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 MDFIC2A0A1B0GVS7 189 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 A0A1B0GW54 56 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 C19orf71A6NCJ1 209 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 FNDC10F2Z333 226 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 C17orf112F2Z3M2 114 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 H3BMM0 161 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 SYNGR2O43760 224 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 SLC25A20O43772 301 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 MDKP21741 143 aaPredicted RBP3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 RNASE4P34096 147 aaKnown RBP3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 NDUFA6P56556 154 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 HIGD2BQ4VC39 106 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 Q56UQ5 140 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 ZFP2Q6ZN57 461 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 MIR7-3HGQ8N6C7 128 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 UBE2WQ96B02 151 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 PSMG3Q9BT73 122 aaPredicted RBP3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 UPK3BQ9BT76 320 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 NMES1Q9C002 83 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 NPVFQ9HCQ7 196 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 NDUFA4L2Q9NRX3 87 aa3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 FLNAP21333 2647 aaKnown RBP3.42□□□□□ -1.86
VPS35P1-201ENST00000563400 DCHS2Q6V1P9 2916 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 TRAV13-1A0A0B4J241 112 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 H3BMG7 143 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 PDZD2O15018 2839 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 CCL25O15444 150 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 TCRAP04437 139 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 IGHV3-30-3P0DP02 117 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 HBBP68871 147 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 C15orf32Q32M92 178 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 C2orf83Q53S99 150 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 TEX261Q6UWH6 196 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 GTSCR1Q86UQ5 136 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 DYNLRB2Q8TF09 96 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 FXYD6Q9H0Q3 95 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 SOX21Q9Y651 276 aaPredicted RBP3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 U3KQK5 164 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 TACC2O95359 2948 aa3.41□□□□□ -1.86
VPS35P1-201ENST00000563400 A0A087WYN8 130 aa3.4□□□□□ -1.86
VPS35P1-201ENST00000563400 IGKV3D-20A0A0C4DH25 116 aa3.4□□□□□ -1.86
VPS35P1-201ENST00000563400 NDUFA4O00483 81 aa3.4□□□□□ -1.86
VPS35P1-201ENST00000563400 SH2D1AO60880 128 aa3.4□□□□□ -1.86
VPS35P1-201ENST00000563400 FOXA3P55318 350 aaPredicted RBP3.4□□□□□ -1.86
VPS35P1-201ENST00000563400 PRB3Q04118 309 aaPredicted RBP3.4□□□□□ -1.86
VPS35P1-201ENST00000563400 EIF4EBP1Q13541 118 aaPredicted RBP3.4□□□□□ -1.86
VPS35P1-201ENST00000563400 NMSQ5H8A3 153 aa3.4□□□□□ -1.86
VPS35P1-201ENST00000563400 DYNAPQ8N1N2 210 aa3.4□□□□□ -1.86
VPS35P1-201ENST00000563400 PSENENQ9NZ42 101 aa3.4□□□□□ -1.86
VPS35P1-201ENST00000563400 EPDR1Q9UM22 224 aa3.4□□□□□ -1.86
VPS35P1-201ENST00000563400 ICOSQ9Y6W8 199 aa3.4□□□□□ -1.86
VPS35P1-201ENST00000563400 ARHGAP32A7KAX9 2087 aa3.4□□□□□ -1.87
VPS35P1-201ENST00000563400 ACANP16112 2415 aa3.4□□□□□ -1.87
VPS35P1-201ENST00000563400 IGKV1OR2-108A0A075B7D4 117 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 TRAV14DV4A0A0A6YYC5 116 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 A0A0B4J2C4 111 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 ZNF727A8MUV8 499 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 YPEL3P61236 119 aaPredicted RBP3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 PKIAP61925 76 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 AKR1C1Q04828 323 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 SPANXN5Q5MJ07 72 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 FAAP20Q6NZ36 180 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 Q6ZTC4 211 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 LYZL2Q7Z4W2 148 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 OSTCQ9NRP0 149 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 TRBV24-1A0A075B6N3 115 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 A8MUU9 505 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 CCDC179H3BU77 68 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 S100A10P60903 97 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 KLK9Q2XQG4 91 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 FAM74A1Q5RGS3 127 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 ZNF705AQ6ZN79 300 aaPredicted RBP3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 PHF5AQ7RTV0 110 aaKnown RBP3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 HIST3H2BBQ8N257 126 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 C10orf126Q8N4M7 172 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 WFDC9Q8NEX5 89 aa3.39□□□□□ -1.87
VPS35P1-201ENST00000563400 FAM103A1Q9BTL3 118 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms