RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 SNRPEP62304 92 aaKnown RBP7.25□□□□□ -1.25
TPM1-227ENST00000560970 GAGE1Q13065 139 aa7.25□□□□□ -1.25
TPM1-227ENST00000560970 GAGE4Q13068 117 aa7.25□□□□□ -1.25
TPM1-227ENST00000560970 GAGE5Q13069 117 aa7.25□□□□□ -1.25
TPM1-227ENST00000560970 GAGE13Q4V321 117 aa7.25□□□□□ -1.25
TPM1-227ENST00000560970 SPANXN1Q5VSR9 72 aa7.25□□□□□ -1.25
TPM1-227ENST00000560970 BORCS7Q96B45 105 aa7.25□□□□□ -1.25
TPM1-227ENST00000560970 TPPP3Q9BW30 176 aa7.25□□□□□ -1.25
TPM1-227ENST00000560970 MSRB1Q9NZV6 116 aa7.25□□□□□ -1.25
TPM1-227ENST00000560970 A0A1B0GUT8 65 aa7.24□□□□□ -1.25
TPM1-227ENST00000560970 CTRLP40313 264 aa7.24□□□□□ -1.25
TPM1-227ENST00000560970 KRTAP10-1P60331 282 aa7.24□□□□□ -1.25
TPM1-227ENST00000560970 RIGQ13278 110 aa7.24□□□□□ -1.25
TPM1-227ENST00000560970 GATD1Q8NB37 220 aa7.24□□□□□ -1.25
TPM1-227ENST00000560970 PGLYRP4Q96LB8 373 aa7.24□□□□□ -1.25
TPM1-227ENST00000560970 TNFRSF18Q9Y5U5 241 aa7.24□□□□□ -1.25
TPM1-227ENST00000560970 KIF25-AS1Q9Y6Z4 181 aa7.24□□□□□ -1.25
TPM1-227ENST00000560970 SRRM2Q9UQ35 2752 aaKnown RBP7.24□□□□□ -1.25
TPM1-227ENST00000560970 APCSP02743 223 aa7.23□□□□□ -1.25
TPM1-227ENST00000560970 EVI2AP22794 236 aa7.23□□□□□ -1.25
TPM1-227ENST00000560970 TIRAPP58753 221 aa7.23□□□□□ -1.25
TPM1-227ENST00000560970 RAB4BP61018 213 aa7.23□□□□□ -1.25
TPM1-227ENST00000560970 LYZL1Q6UWQ5 148 aa7.23□□□□□ -1.25
TPM1-227ENST00000560970 C10orf126Q8N4M7 172 aa7.23□□□□□ -1.25
TPM1-227ENST00000560970 F2Z2F3 143 aa7.22□□□□□ -1.25
TPM1-227ENST00000560970 ZNF56Q15929 161 aa7.22□□□□□ -1.25
TPM1-227ENST00000560970 SH2D6Q7Z4S9 175 aa7.22□□□□□ -1.25
TPM1-227ENST00000560970 ATP6V0E2Q8NHE4 81 aa7.22□□□□□ -1.25
TPM1-227ENST00000560970 AP1S3Q96PC3 154 aa7.22□□□□□ -1.25
TPM1-227ENST00000560970 GCSHP23434 173 aa7.21□□□□□ -1.26
TPM1-227ENST00000560970 CAMPP49913 170 aa7.21□□□□□ -1.26
TPM1-227ENST00000560970 CACNG7P62955 275 aa7.21□□□□□ -1.26
TPM1-227ENST00000560970 Q0VG73 95 aa7.21□□□□□ -1.26
TPM1-227ENST00000560970 HIST3H2BBQ8N257 126 aa7.21□□□□□ -1.26
TPM1-227ENST00000560970 NEXN-AS1Q8NBZ9 246 aa7.21□□□□□ -1.26
TPM1-227ENST00000560970 CNFNQ9BYD5 112 aa7.21□□□□□ -1.26
TPM1-227ENST00000560970 GTSF1LQ9H1H1 148 aa7.21□□□□□ -1.26
TPM1-227ENST00000560970 FLG2Q5D862 2391 aaPredicted RBP7.21□□□□□ -1.26
TPM1-227ENST00000560970 IGLV5-52A0A0A0MRZ9 124 aa7.2□□□□□ -1.26
TPM1-227ENST00000560970 TRBV10-1A0A0K0K1A3 114 aa7.2□□□□□ -1.26
TPM1-227ENST00000560970 MGPP08493 103 aa7.2□□□□□ -1.26
TPM1-227ENST00000560970 AKR1D1P51857 326 aa7.2□□□□□ -1.26
TPM1-227ENST00000560970 OR10J3Q5JRS4 329 aa7.2□□□□□ -1.26
TPM1-227ENST00000560970 LELP1Q5T871 98 aa7.2□□□□□ -1.26
TPM1-227ENST00000560970 Q8N3U1 123 aa7.2□□□□□ -1.26
TPM1-227ENST00000560970 NTN5Q8WTR8 489 aaPredicted RBP7.2□□□□□ -1.26
TPM1-227ENST00000560970 TMEM70Q9BUB7 260 aa7.2□□□□□ -1.26
TPM1-227ENST00000560970 FAM229AH3BQW9 127 aa7.19□□□□□ -1.26
TPM1-227ENST00000560970 PSCAO43653 123 aa7.19□□□□□ -1.26
TPM1-227ENST00000560970 NTF3P20783 257 aa7.19□□□□□ -1.26
TPM1-227ENST00000560970 S100A2P29034 98 aa7.19□□□□□ -1.26
TPM1-227ENST00000560970 UBE2D3P61077 147 aa7.19□□□□□ -1.26
TPM1-227ENST00000560970 UBE2D2P62837 147 aa7.19□□□□□ -1.26
TPM1-227ENST00000560970 HAMPP81172 84 aa7.19□□□□□ -1.26
TPM1-227ENST00000560970 C21orf62-AS1Q17RA5 79 aa7.19□□□□□ -1.26
TPM1-227ENST00000560970 SUMO4Q6EEV6 95 aa7.19□□□□□ -1.26
TPM1-227ENST00000560970 SMR3BP02814 79 aaPredicted RBP7.18□□□□□ -1.26
TPM1-227ENST00000560970 SMIM17P0DL12 118 aa7.18□□□□□ -1.26
TPM1-227ENST00000560970 ESDP10768 282 aa7.18□□□□□ -1.26
TPM1-227ENST00000560970 RPL36AP83881 106 aaKnown RBP7.18□□□□□ -1.26
TPM1-227ENST00000560970 LINC01556Q5JQF7 62 aa7.18□□□□□ -1.26
TPM1-227ENST00000560970 RPL36ALQ969Q0 106 aaKnown RBP7.18□□□□□ -1.26
TPM1-227ENST00000560970 DNAH8Q96JB1 4490 aa7.17□□□□□ -1.26
TPM1-227ENST00000560970 TRBV7-3A0A075B6L6 115 aa7.17□□□□□ -1.26
TPM1-227ENST00000560970 IGHV3-38A0A0C4DH36 116 aa7.17□□□□□ -1.26
TPM1-227ENST00000560970 IFITM10A6NMD0 228 aa7.17□□□□□ -1.26
TPM1-227ENST00000560970 F5H697 171 aa7.17□□□□□ -1.26
TPM1-227ENST00000560970 M0QY20 66 aa7.17□□□□□ -1.26
TPM1-227ENST00000560970 SMIM6P0DI80 62 aa7.17□□□□□ -1.26
TPM1-227ENST00000560970 TWIST1Q15672 202 aa7.17□□□□□ -1.26
TPM1-227ENST00000560970 BAGE3Q86Y29 109 aa7.17□□□□□ -1.26
TPM1-227ENST00000560970 ALKBH7Q9BT30 221 aaPredicted RBP7.17□□□□□ -1.26
TPM1-227ENST00000560970 DPH3P1Q9H4G8 78 aa7.17□□□□□ -1.26
TPM1-227ENST00000560970 TRAV8-6A0A0B4J262 113 aa7.16□□□□□ -1.26
TPM1-227ENST00000560970 LRCOL1A6NCL2 159 aa7.16□□□□□ -1.26
TPM1-227ENST00000560970 IGHV3-30P01768 117 aa7.16□□□□□ -1.26
TPM1-227ENST00000560970 IGHV3-33P01772 117 aa7.16□□□□□ -1.26
TPM1-227ENST00000560970 IGHV3-30-3P0DP02 117 aa7.16□□□□□ -1.26
TPM1-227ENST00000560970 IGHV3-30-5P0DP03 117 aa7.16□□□□□ -1.26
TPM1-227ENST00000560970 KIAA1644Q3SXP7 199 aa7.16□□□□□ -1.26
TPM1-227ENST00000560970 Q8N814 137 aa7.16□□□□□ -1.26
TPM1-227ENST00000560970 TMEM18Q96B42 140 aa7.16□□□□□ -1.26
TPM1-227ENST00000560970 PACRGQ96M98 296 aaPredicted RBP7.16□□□□□ -1.26
TPM1-227ENST00000560970 HIST1H2BLQ99880 126 aa7.16□□□□□ -1.26
TPM1-227ENST00000560970 TMEM191AQ9H0A3 160 aa7.16□□□□□ -1.26
TPM1-227ENST00000560970 TRAV26-2A0A0B4J265 109 aa7.15□□□□□ -1.26
TPM1-227ENST00000560970 SERF1AO75920 110 aa7.15□□□□□ -1.26
TPM1-227ENST00000560970 FABP4P15090 132 aa7.15□□□□□ -1.26
TPM1-227ENST00000560970 FAM104BQ5XKR9 115 aa7.15□□□□□ -1.26
TPM1-227ENST00000560970 SMIM15Q7Z3B0 74 aa7.15□□□□□ -1.26
TPM1-227ENST00000560970 C18orf32Q8TCD1 76 aa7.15□□□□□ -1.26
TPM1-227ENST00000560970 IBA57-AS1B1ANH7 110 aa7.14□□□□□ -1.27
TPM1-227ENST00000560970 LAGE3Q14657 143 aa7.14□□□□□ -1.27
TPM1-227ENST00000560970 PDZD11Q5EBL8 140 aa7.14□□□□□ -1.27
TPM1-227ENST00000560970 NTM-AS1Q6ZSK4 140 aa7.14□□□□□ -1.27
TPM1-227ENST00000560970 LINC00518Q8N0U6 118 aa7.14□□□□□ -1.27
TPM1-227ENST00000560970 Q9HAA7 133 aa7.14□□□□□ -1.27
TPM1-227ENST00000560970 TRBV6-8A0A0A6YYG3 113 aa7.13□□□□□ -1.27
TPM1-227ENST00000560970 GAS8-AS1O95177 125 aa7.13□□□□□ -1.27
TPM1-227ENST00000560970 PPBPP02775 128 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms