RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 MDC1Q14676 2089 aaKnown RBP2.36□□□□□ -2.03
PRPF39-210ENST00000556718 TRPM6Q9BX84 2022 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 ANAPC1Q9H1A4 1944 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 IGKV1D-43A0A0B4J1Z2 117 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 RBAKDNA6NC62 111 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 D6R8Y8 96 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 F8VRH5 84 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 TCL1BO95988 128 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 SLC25A16P16260 332 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 S100A7L2Q5SY68 101 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 AAED1Q7RTV5 226 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 SERP2Q8N6R1 65 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 TMEM75Q8N9X5 138 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 ODF3Q96PU9 254 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 SCN3AQ9NY46 2000 aa2.35□□□□□ -2.03
PRPF39-210ENST00000556718 TNS1Q9HBL0 1735 aaKnown RBP2.34□□□□□ -2.03
PRPF39-210ENST00000556718 IGKV2D-26A0A0A0MRZ7 120 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 IGLV3-32A0A0A0MS00 114 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 TRBV30A0A0K0K1B3 111 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 KNCNA6PVL3 124 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 C17orf98A8MV24 154 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 PSCAO43653 123 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 BCE1O60756 84 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 LYZL6O75951 148 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 NDUFA3O95167 84 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 TCRAP04437 139 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 COL8A2P25067 703 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 ATP5EP56381 51 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-210ENST00000556718 VMA21Q3ZAQ7 101 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 MRPL51Q4U2R6 128 aaKnown RBP2.34□□□□□ -2.03
PRPF39-210ENST00000556718 FAM201AQ5SY85 155 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 Q6ZRU5 148 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 SCGB3A1Q96QR1 104 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 MRPL35Q9NZE8 188 aaKnown RBP2.34□□□□□ -2.03
PRPF39-210ENST00000556718 PKIGQ9Y2B9 76 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 R4GN34 69 aa2.34□□□□□ -2.03
PRPF39-210ENST00000556718 PAPPA2Q9BXP8 1791 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 OBSL1O75147 1896 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 NDUFC1O43677 76 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 IGLV6-57P01721 117 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 CLPSP04118 112 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 ARMS2P0C7Q2 107 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 RNASE2P10153 161 aaKnown RBP2.33□□□□□ -2.04
PRPF39-210ENST00000556718 DEFA4P12838 97 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 LGALS3P17931 250 aaKnown RBP2.33□□□□□ -2.04
PRPF39-210ENST00000556718 KRTAP10-10P60014 251 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 PRCDQ00LT1 54 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 SPINK9Q5DT21 86 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 LYZL1Q6UWQ5 148 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 LINC00305Q7Z4B0 112 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 ADM2Q7Z4H4 148 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 C5orf38Q86SI9 138 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 Q86TA4 180 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 C3orf56Q8N813 242 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 DAND5Q8N907 189 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 TMEM141Q96I45 108 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 FAM167A-AS1Q96KT0 104 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 HIGD2AQ9BW72 106 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 DPH3P1Q9H4G8 78 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 TMEM14BQ9NUH8 114 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 TMEM14CQ9P0S9 112 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 LINC00588Q9Y4M8 146 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 FANCMQ8IYD8 2048 aa2.33□□□□□ -2.04
PRPF39-210ENST00000556718 ATG2AQ2TAZ0 1938 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 TEX49A0A1B0GTD5 131 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 hADV29S1A0JD25 119 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 J3QQQ9 107 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 M0R3E3 92 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 CCL16O15467 120 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 IGHV3-33P01772 117 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 BSPH1Q075Z2 132 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 SFTA2Q6UW10 78 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 TMEM86BQ8N661 226 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 TM2D3Q9BRN9 247 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 CPAMD8Q8IZJ3 1885 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 DOCK11Q5JSL3 2073 aa2.32□□□□□ -2.04
PRPF39-210ENST00000556718 GPR179Q6PRD1 2367 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 NCKAP5O14513 1909 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 DOCK3Q8IZD9 2030 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 TRGV5A0A0B4J1U4 118 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 A0A0J9YY99 117 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 FAM236DA0A1B0GTK5 79 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 LECT2O14960 151 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 IGHV3-30P01768 117 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 IGHV3-30-5P0DP03 117 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 FAM236CP0DP71 79 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 HRES1P13985 223 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 CD24P25063 80 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 EFNA4P52798 201 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 PMAIP1Q13794 54 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 CIRBPQ14011 172 aaKnown RBP2.31□□□□□ -2.04
PRPF39-210ENST00000556718 NUMA1Q14980 2115 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 KRTAP25-1Q3LHN0 102 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 ATP5EP2Q5VTU8 51 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 TRIOBPQ9H2D6 2365 aa2.31□□□□□ -2.04
PRPF39-210ENST00000556718 IGKV1D-37A0A075B6S9 117 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 IGKV3D-11A0A0A0MRZ8 115 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 TRBV7-1A0A0A6YYK4 115 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 TRAV41A0A0B4J266 112 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms