RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 FER1L6-AS1Q8NA97 138 aa8.17□□□□□ -1.1
SHMT2-223ENST00000556689 IL36BQ9NZH7 164 aa8.17□□□□□ -1.1
SHMT2-223ENST00000556689 H3BVH4 76 aa8.16□□□□□ -1.1
SHMT2-223ENST00000556689 S100A8P05109 93 aa8.16□□□□□ -1.1
SHMT2-223ENST00000556689 CRIP1P50238 77 aa8.16□□□□□ -1.1
SHMT2-223ENST00000556689 ENHOQ6UWT2 76 aa8.16□□□□□ -1.1
SHMT2-223ENST00000556689 Q6ZRU5 148 aa8.16□□□□□ -1.1
SHMT2-223ENST00000556689 IMMP2LQ96T52 175 aa8.16□□□□□ -1.1
SHMT2-223ENST00000556689 PHLDA3Q9Y5J5 127 aa8.16□□□□□ -1.1
SHMT2-223ENST00000556689 TRAV9-1A0A075B6T8 112 aa8.15□□□□□ -1.1
SHMT2-223ENST00000556689 CACNG7P62955 275 aa8.15□□□□□ -1.1
SHMT2-223ENST00000556689 RPL36AP83881 106 aaKnown RBP8.15□□□□□ -1.1
SHMT2-223ENST00000556689 FAM74A4Q5TZK3 123 aa8.15□□□□□ -1.1
SHMT2-223ENST00000556689 SPANXN1Q5VSR9 72 aa8.15□□□□□ -1.1
SHMT2-223ENST00000556689 SMIM15Q7Z3B0 74 aa8.15□□□□□ -1.1
SHMT2-223ENST00000556689 ZFP82Q8N141 532 aa8.15□□□□□ -1.1
SHMT2-223ENST00000556689 C9orf163Q8N9P6 203 aa8.15□□□□□ -1.1
SHMT2-223ENST00000556689 RPL36ALQ969Q0 106 aaKnown RBP8.15□□□□□ -1.1
SHMT2-223ENST00000556689 SMCO4Q9NRQ5 59 aa8.15□□□□□ -1.1
SHMT2-223ENST00000556689 V9GYV3 84 aa8.15□□□□□ -1.1
SHMT2-223ENST00000556689 RNF213Q63HN8 5207 aa8.15□□□□□ -1.11
SHMT2-223ENST00000556689 TRBV10-1A0A0K0K1A3 114 aa8.14□□□□□ -1.11
SHMT2-223ENST00000556689 GRIFINA4D1Z8 144 aa8.14□□□□□ -1.11
SHMT2-223ENST00000556689 HIGD1CA8MV81 97 aa8.14□□□□□ -1.11
SHMT2-223ENST00000556689 USP17L23D6RBM5 183 aa8.14□□□□□ -1.11
SHMT2-223ENST00000556689 CRPP02741 224 aa8.14□□□□□ -1.11
SHMT2-223ENST00000556689 ARMS2P0C7Q2 107 aa8.14□□□□□ -1.11
SHMT2-223ENST00000556689 TRBV7-3A0A075B6L6 115 aa8.13□□□□□ -1.11
SHMT2-223ENST00000556689 A0A087WWL8 130 aa8.13□□□□□ -1.11
SHMT2-223ENST00000556689 A0A1B0GW15 77 aa8.13□□□□□ -1.11
SHMT2-223ENST00000556689 SMIM27A0A1W2PRY6 76 aa8.13□□□□□ -1.11
SHMT2-223ENST00000556689 PRSS1P07477 247 aa8.13□□□□□ -1.11
SHMT2-223ENST00000556689 OR5AL1P0C617 328 aa8.13□□□□□ -1.11
SHMT2-223ENST00000556689 CTRLP40313 264 aa8.13□□□□□ -1.11
SHMT2-223ENST00000556689 UBE2D3P61077 147 aa8.13□□□□□ -1.11
SHMT2-223ENST00000556689 UBE2D2P62837 147 aa8.13□□□□□ -1.11
SHMT2-223ENST00000556689 RIGQ13278 110 aa8.13□□□□□ -1.11
SHMT2-223ENST00000556689 DNLZQ5SXM8 178 aa8.13□□□□□ -1.11
SHMT2-223ENST00000556689 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.13□□□□□ -1.11
SHMT2-223ENST00000556689 TRBV6-8A0A0A6YYG3 113 aa8.12□□□□□ -1.11
SHMT2-223ENST00000556689 A0A1B0GUT8 65 aa8.12□□□□□ -1.11
SHMT2-223ENST00000556689 HLA-DQA1P01909 254 aa8.12□□□□□ -1.11
SHMT2-223ENST00000556689 ANGP03950 147 aaKnown RBP8.12□□□□□ -1.11
SHMT2-223ENST00000556689 TRGC1P0CF51 173 aa8.12□□□□□ -1.11
SHMT2-223ENST00000556689 SMIM17P0DL12 118 aa8.12□□□□□ -1.11
SHMT2-223ENST00000556689 GZMBP10144 247 aa8.12□□□□□ -1.11
SHMT2-223ENST00000556689 SDIM1Q6ZPB5 146 aa8.12□□□□□ -1.11
SHMT2-223ENST00000556689 ATP5L2Q7Z4Y8 100 aa8.12□□□□□ -1.11
SHMT2-223ENST00000556689 PGLYRP4Q96LB8 373 aa8.12□□□□□ -1.11
SHMT2-223ENST00000556689 AP1S3Q96PC3 154 aa8.12□□□□□ -1.11
SHMT2-223ENST00000556689 LRP2P98164 4655 aa8.12□□□□□ -1.11
SHMT2-223ENST00000556689 PANO1I0J062 215 aa8.11□□□□□ -1.11
SHMT2-223ENST00000556689 M0R381 172 aa8.11□□□□□ -1.11
SHMT2-223ENST00000556689 MIAQ16674 131 aa8.11□□□□□ -1.11
SHMT2-223ENST00000556689 COX19Q49B96 90 aa8.11□□□□□ -1.11
SHMT2-223ENST00000556689 SNAI2O43623 268 aa8.1□□□□□ -1.11
SHMT2-223ENST00000556689 IGLC6P0CF74 106 aa8.1□□□□□ -1.11
SHMT2-223ENST00000556689 HBBP68871 147 aa8.1□□□□□ -1.11
SHMT2-223ENST00000556689 TWIST1Q15672 202 aa8.1□□□□□ -1.11
SHMT2-223ENST00000556689 MPV17L2Q567V2 206 aa8.1□□□□□ -1.11
SHMT2-223ENST00000556689 WDR73Q6P4I2 378 aa8.1□□□□□ -1.11
SHMT2-223ENST00000556689 LYZL1Q6UWQ5 148 aa8.1□□□□□ -1.11
SHMT2-223ENST00000556689 DPH3Q96FX2 82 aa8.1□□□□□ -1.11
SHMT2-223ENST00000556689 FOXA3P55318 350 aaPredicted RBP8.09□□□□□ -1.11
SHMT2-223ENST00000556689 RAB4BP61018 213 aa8.09□□□□□ -1.11
SHMT2-223ENST00000556689 PKIAP61925 76 aa8.09□□□□□ -1.11
SHMT2-223ENST00000556689 RASL11AQ6T310 242 aa8.09□□□□□ -1.11
SHMT2-223ENST00000556689 NUP35Q8NFH5 326 aa8.09□□□□□ -1.11
SHMT2-223ENST00000556689 GTSF1Q8WW33 167 aa8.09□□□□□ -1.11
SHMT2-223ENST00000556689 TNXBP22105 4242 aa8.08□□□□□ -1.12
SHMT2-223ENST00000556689 MT-ND6P03923 174 aa8.08□□□□□ -1.12
SHMT2-223ENST00000556689 MRPL54Q6P161 138 aaKnown RBP8.08□□□□□ -1.12
SHMT2-223ENST00000556689 CBLN2Q8IUK8 224 aa8.08□□□□□ -1.12
SHMT2-223ENST00000556689 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.08□□□□□ -1.12
SHMT2-223ENST00000556689 OR10AG1Q8NH19 301 aa8.08□□□□□ -1.12
SHMT2-223ENST00000556689 CHCHD5Q9BSY4 110 aa8.08□□□□□ -1.12
SHMT2-223ENST00000556689 DPH3P1Q9H4G8 78 aa8.08□□□□□ -1.12
SHMT2-223ENST00000556689 SSTP61278 116 aa8.07□□□□□ -1.12
SHMT2-223ENST00000556689 CIRBPQ14011 172 aaKnown RBP8.07□□□□□ -1.12
SHMT2-223ENST00000556689 SSBP4Q9BWG4 385 aaPredicted RBP8.07□□□□□ -1.12
SHMT2-223ENST00000556689 CNFNQ9BYD5 112 aa8.07□□□□□ -1.12
SHMT2-223ENST00000556689 PRR34Q9NV39 138 aa8.07□□□□□ -1.12
SHMT2-223ENST00000556689 NTF3P20783 257 aa8.06□□□□□ -1.12
SHMT2-223ENST00000556689 CAMPP49913 170 aa8.06□□□□□ -1.12
SHMT2-223ENST00000556689 TMEM97Q5BJF2 176 aa8.06□□□□□ -1.12
SHMT2-223ENST00000556689 KRTAP26-1Q6PEX3 210 aa8.06□□□□□ -1.12
SHMT2-223ENST00000556689 LINC00269Q8N2A0 174 aa8.06□□□□□ -1.12
SHMT2-223ENST00000556689 NEXN-AS1Q8NBZ9 246 aa8.06□□□□□ -1.12
SHMT2-223ENST00000556689 RNF185Q96GF1 192 aa8.06□□□□□ -1.12
SHMT2-223ENST00000556689 TRBV24-1A0A075B6N3 115 aa8.05□□□□□ -1.12
SHMT2-223ENST00000556689 MUC21A0A0G2JKD1 596 aa8.05□□□□□ -1.12
SHMT2-223ENST00000556689 MUC21A0A140T8X8 626 aa8.05□□□□□ -1.12
SHMT2-223ENST00000556689 MGPP08493 103 aa8.05□□□□□ -1.12
SHMT2-223ENST00000556689 CNBPP62633 177 aaKnown RBP8.05□□□□□ -1.12
SHMT2-223ENST00000556689 RBX1P62877 108 aa8.05□□□□□ -1.12
SHMT2-223ENST00000556689 ZNF56Q15929 161 aa8.05□□□□□ -1.12
SHMT2-223ENST00000556689 CLPSL2Q6UWE3 100 aa8.05□□□□□ -1.12
SHMT2-223ENST00000556689 IGHV3-64A0A075B6Q5 118 aa8.04□□□□□ -1.12
SHMT2-223ENST00000556689 A0A087WYN8 130 aa8.04□□□□□ -1.12
SHMT2-223ENST00000556689 hDV102S1A0JD36 115 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms