RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 MAFIPQ8WZ33 124 aa-0.4□□□□□ -2.47
CCDC38-204ENST00000546816 TMEM191AQ9H0A3 160 aa-0.4□□□□□ -2.47
CCDC38-204ENST00000546816 AKAP6Q13023 2319 aa-0.4□□□□□ -2.47
CCDC38-204ENST00000546816 PTPN13Q12923 2485 aa-0.4□□□□□ -2.47
CCDC38-204ENST00000546816 PTPRQQ9UMZ3 2332 aa-0.41□□□□□ -2.47
CCDC38-204ENST00000546816 SPAARA0A1B0GVQ0 90 aa-0.41□□□□□ -2.48
CCDC38-204ENST00000546816 TCEAL4Q96EI5 215 aa-0.41□□□□□ -2.48
CCDC38-204ENST00000546816 DPH3Q96FX2 82 aa-0.41□□□□□ -2.48
CCDC38-204ENST00000546816 SEC11CQ9BY50 192 aa-0.41□□□□□ -2.48
CCDC38-204ENST00000546816 SCN3BQ9NY72 215 aa-0.41□□□□□ -2.48
CCDC38-204ENST00000546816 LAMC1P11047 1609 aa-0.42□□□□□ -2.48
CCDC38-204ENST00000546816 TRAV22A0A0B4J277 110 aa-0.42□□□□□ -2.48
CCDC38-204ENST00000546816 MYOM3Q5VTT5 1437 aa-0.42□□□□□ -2.48
CCDC38-204ENST00000546816 MUC2Q02817 5179 aa-0.42□□□□□ -2.48
CCDC38-204ENST00000546816 C2CD3Q4AC94 2353 aa-0.42□□□□□ -2.48
CCDC38-204ENST00000546816 PKD1L1Q8TDX9 2849 aa-0.43□□□□□ -2.48
CCDC38-204ENST00000546816 HCG22E2RYF7 251 aa-0.43□□□□□ -2.48
CCDC38-204ENST00000546816 BCE1O60756 84 aa-0.43□□□□□ -2.48
CCDC38-204ENST00000546816 SMCO1Q147U7 214 aa-0.43□□□□□ -2.48
CCDC38-204ENST00000546816 Q8IZM0 81 aa-0.43□□□□□ -2.48
CCDC38-204ENST00000546816 NPVFQ9HCQ7 196 aa-0.43□□□□□ -2.48
CCDC38-204ENST00000546816 CCDC167Q9P0B6 97 aa-0.43□□□□□ -2.48
CCDC38-204ENST00000546816 R4GMQ9 66 aa-0.43□□□□□ -2.48
CCDC38-204ENST00000546816 MRC1P22897 1456 aa-0.43□□□□□ -2.48
CCDC38-204ENST00000546816 PPRC1Q5VV67 1664 aaKnown RBP-0.43□□□□□ -2.48
CCDC38-204ENST00000546816 ALMS1Q8TCU4 4167 aa-0.44□□□□□ -2.48
CCDC38-204ENST00000546816 M0R135 149 aa-0.44□□□□□ -2.48
CCDC38-204ENST00000546816 PPP1R17O96001 155 aa-0.44□□□□□ -2.48
CCDC38-204ENST00000546816 PRM1P04553 51 aa-0.44□□□□□ -2.48
CCDC38-204ENST00000546816 SPRR1AP35321 89 aa-0.44□□□□□ -2.48
CCDC38-204ENST00000546816 AGPAT4-IT1Q9H0P7 198 aa-0.44□□□□□ -2.48
CCDC38-204ENST00000546816 SPCS1Q9Y6A9 102 aa-0.44□□□□□ -2.48
CCDC38-204ENST00000546816 GRIN2AQ12879 1464 aa-0.44□□□□□ -2.48
CCDC38-204ENST00000546816 FAT2Q9NYQ8 4349 aa-0.45□□□□□ -2.48
CCDC38-204ENST00000546816 LRP6O75581 1613 aa-0.45□□□□□ -2.48
CCDC38-204ENST00000546816 TRAV13-2A0A0B4J235 113 aa-0.45□□□□□ -2.48
CCDC38-204ENST00000546816 NWD2Q9ULI1 1742 aa-0.45□□□□□ -2.48
CCDC38-204ENST00000546816 VWFP04275 2813 aa-0.45□□□□□ -2.48
CCDC38-204ENST00000546816 KDM3BQ7LBC6 1761 aa-0.45□□□□□ -2.48
CCDC38-204ENST00000546816 CHD6Q8TD26 2715 aa-0.45□□□□□ -2.48
CCDC38-204ENST00000546816 PKDREJQ9NTG1 2253 aa-0.45□□□□□ -2.48
CCDC38-204ENST00000546816 DOPEY2Q9Y3R5 2298 aa-0.45□□□□□ -2.48
CCDC38-204ENST00000546816 PRDM2Q13029 1718 aa-0.46□□□□□ -2.48
CCDC38-204ENST00000546816 MYH9P35579 1960 aaKnown RBP-0.46□□□□□ -2.48
CCDC38-204ENST00000546816 HIST1H1DP16402 221 aaKnown RBP-0.46□□□□□ -2.48
CCDC38-204ENST00000546816 C10orf128Q5T292 105 aa-0.46□□□□□ -2.48
CCDC38-204ENST00000546816 SMIM4Q8WVI0 70 aa-0.46□□□□□ -2.48
CCDC38-204ENST00000546816 AMELXQ99217 191 aa-0.46□□□□□ -2.48
CCDC38-204ENST00000546816 PFDN5Q99471 154 aa-0.46□□□□□ -2.48
CCDC38-204ENST00000546816 LENEPQ9Y5L5 61 aa-0.46□□□□□ -2.48
CCDC38-204ENST00000546816 STAB1Q9NY15 2570 aa-0.46□□□□□ -2.48
CCDC38-204ENST00000546816 TNXBP22105 4242 aa-0.46□□□□□ -2.48
CCDC38-204ENST00000546816 UNC13AQ9UPW8 1703 aa-0.47□□□□□ -2.48
CCDC38-204ENST00000546816 FLNAP21333 2647 aaKnown RBP-0.47□□□□□ -2.48
CCDC38-204ENST00000546816 PLXNB2O15031 1838 aa-0.47□□□□□ -2.48
CCDC38-204ENST00000546816 I3L2K1 104 aa-0.47□□□□□ -2.48
CCDC38-204ENST00000546816 RBM3P98179 157 aaKnown RBP-0.47□□□□□ -2.48
CCDC38-204ENST00000546816 Q8N8P6 123 aa-0.47□□□□□ -2.48
CCDC38-204ENST00000546816 AQP10Q96PS8 301 aa-0.47□□□□□ -2.48
CCDC38-204ENST00000546816 TP53AIP1Q9HCN2 124 aa-0.47□□□□□ -2.48
CCDC38-204ENST00000546816 PAIP2BQ9ULR5 123 aaKnown RBP-0.47□□□□□ -2.48
CCDC38-204ENST00000546816 HECTD4Q9Y4D8 3996 aa-0.47□□□□□ -2.48
CCDC38-204ENST00000546816 WNK3Q9BYP7 1800 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 CFTRP13569 1480 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 BSNQ9UPA5 3926 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 ARPC4P59998 168 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 HAMPP81172 84 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 SPAG11BQ08648 103 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 C12orf73Q69YU5 71 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 SPAG11AQ6PDA7 123 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 LSM10Q969L4 123 aaKnown RBP-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 PDCD10Q9BUL8 212 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 LINC00472Q9H8W2 130 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 LRRC37A2A6NM11 1700 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 C10orf71Q711Q0 1435 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 NEBP20929 6669 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 BCL9LQ86UU0 1499 aa-0.48□□□□□ -2.49
CCDC38-204ENST00000546816 PIGBOS1A0A0B4J2F0 54 aa-0.49□□□□□ -2.49
CCDC38-204ENST00000546816 CTXND1A0A1B0GTU2 59 aa-0.49□□□□□ -2.49
CCDC38-204ENST00000546816 Q6AWC8 147 aa-0.49□□□□□ -2.49
CCDC38-204ENST00000546816 TTC9CQ8N5M4 171 aa-0.49□□□□□ -2.49
CCDC38-204ENST00000546816 RERGLQ9H628 205 aa-0.49□□□□□ -2.49
CCDC38-204ENST00000546816 PPIP5K1Q6PFW1 1433 aa-0.49□□□□□ -2.49
CCDC38-204ENST00000546816 ERCC6L2Q5T890 1561 aa-0.49□□□□□ -2.49
CCDC38-204ENST00000546816 BICRAQ9NZM4 1560 aa-0.49□□□□□ -2.49
CCDC38-204ENST00000546816 S100A3P33764 101 aa-0.5□□□□□ -2.49
CCDC38-204ENST00000546816 COPS9Q8WXC6 57 aa-0.5□□□□□ -2.49
CCDC38-204ENST00000546816 SNRNP25Q9BV90 132 aaKnown RBP-0.5□□□□□ -2.49
CCDC38-204ENST00000546816 SERP1Q9Y6X1 66 aa-0.5□□□□□ -2.49
CCDC38-204ENST00000546816 V9GYH0 126 aa-0.5□□□□□ -2.49
CCDC38-204ENST00000546816 ARAP2Q8WZ64 1704 aa-0.5□□□□□ -2.49
CCDC38-204ENST00000546816 SPEF2Q9C093 1822 aa-0.5□□□□□ -2.49
CCDC38-204ENST00000546816 COX17Q14061 63 aa-0.51□□□□□ -2.49
CCDC38-204ENST00000546816 ZANQ9Y493 2812 aa-0.51□□□□□ -2.49
CCDC38-204ENST00000546816 ZNF236Q9UL36 1845 aa-0.52□□□□□ -2.49
CCDC38-204ENST00000546816 DCHS2Q6V1P9 2916 aa-0.52□□□□□ -2.49
CCDC38-204ENST00000546816 SELENOWP63302 87 aa-0.52□□□□□ -2.49
CCDC38-204ENST00000546816 DCDP81605 110 aaKnown RBP-0.52□□□□□ -2.49
CCDC38-204ENST00000546816 TMEM170BQ5T4T1 132 aa-0.52□□□□□ -2.49
CCDC38-204ENST00000546816 Q6JHZ5 121 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms