RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 SPANXDQ9BXN6 97 aa1.29□□□□□ -2.2
SRGAP1-204ENST00000542381 BPESC1Q9GZL8 116 aa1.29□□□□□ -2.2
SRGAP1-204ENST00000542381 A0A0D9SG42 100 aa1.28□□□□□ -2.2
SRGAP1-204ENST00000542381 SSSCA1O60232 199 aa1.28□□□□□ -2.2
SRGAP1-204ENST00000542381 IFITM1P13164 125 aa1.28□□□□□ -2.2
SRGAP1-204ENST00000542381 TSLPQ969D9 159 aa1.28□□□□□ -2.2
SRGAP1-204ENST00000542381 SCP2D1Q9UJQ7 156 aa1.28□□□□□ -2.2
SRGAP1-204ENST00000542381 MAPKBP1O60336 1514 aa1.28□□□□□ -2.2
SRGAP1-204ENST00000542381 BAZ1AQ9NRL2 1556 aaPredicted RBP1.28□□□□□ -2.2
SRGAP1-204ENST00000542381 SCRIBQ14160 1630 aa1.28□□□□□ -2.2
SRGAP1-204ENST00000542381 TET3O43151 1660 aa1.27□□□□□ -2.21
SRGAP1-204ENST00000542381 PXDNQ92626 1479 aa1.27□□□□□ -2.21
SRGAP1-204ENST00000542381 TRAV1-2A0A0B4J238 106 aa1.27□□□□□ -2.21
SRGAP1-204ENST00000542381 UBE2L5PA0A1B0GUS4 154 aa1.27□□□□□ -2.21
SRGAP1-204ENST00000542381 UBE2L3P68036 154 aaKnown RBP1.27□□□□□ -2.21
SRGAP1-204ENST00000542381 SMIM11BQ8TCY0 68 aa1.27□□□□□ -2.21
SRGAP1-204ENST00000542381 CDK13Q14004 1512 aaKnown RBP1.26□□□□□ -2.21
SRGAP1-204ENST00000542381 MRC2Q9UBG0 1479 aa1.26□□□□□ -2.21
SRGAP1-204ENST00000542381 ATP5EP56381 51 aaPredicted RBP1.26□□□□□ -2.21
SRGAP1-204ENST00000542381 MYOZ3Q8TDC0 251 aa1.26□□□□□ -2.21
SRGAP1-204ENST00000542381 C14orf144Q96I85 54 aa1.26□□□□□ -2.21
SRGAP1-204ENST00000542381 WFDC6Q9BQY6 131 aa1.26□□□□□ -2.21
SRGAP1-204ENST00000542381 PRR15LQ9BU68 103 aa1.26□□□□□ -2.21
SRGAP1-204ENST00000542381 CYP4F30PQ9H0H9 118 aa1.26□□□□□ -2.21
SRGAP1-204ENST00000542381 SPHKAPQ2M3C7 1700 aa1.26□□□□□ -2.21
SRGAP1-204ENST00000542381 AHNAK2Q8IVF2 5795 aa1.26□□□□□ -2.21
SRGAP1-204ENST00000542381 MRC1P22897 1456 aa1.25□□□□□ -2.21
SRGAP1-204ENST00000542381 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
SRGAP1-204ENST00000542381 GVQW2A0A096LPI5 108 aaPredicted RBP1.25□□□□□ -2.21
SRGAP1-204ENST00000542381 BAGE3Q86Y29 109 aa1.25□□□□□ -2.21
SRGAP1-204ENST00000542381 ANKRD26Q9UPS8 1709 aa1.25□□□□□ -2.21
SRGAP1-204ENST00000542381 NESP48681 1621 aa1.25□□□□□ -2.21
SRGAP1-204ENST00000542381 ABCA3Q99758 1704 aa1.24□□□□□ -2.21
SRGAP1-204ENST00000542381 TMEM14DPA8MWL7 114 aa1.24□□□□□ -2.21
SRGAP1-204ENST00000542381 SPINK8P0C7L1 97 aa1.24□□□□□ -2.21
SRGAP1-204ENST00000542381 CCL18P55774 89 aa1.24□□□□□ -2.21
SRGAP1-204ENST00000542381 HSD52Q0P140 79 aa1.24□□□□□ -2.21
SRGAP1-204ENST00000542381 VMO1Q7Z5L0 202 aa1.24□□□□□ -2.21
SRGAP1-204ENST00000542381 LINC00474Q9P2X8 69 aa1.24□□□□□ -2.21
SRGAP1-204ENST00000542381 LENEPQ9Y5L5 61 aa1.24□□□□□ -2.21
SRGAP1-204ENST00000542381 R4GMQ9 66 aa1.24□□□□□ -2.21
SRGAP1-204ENST00000542381 V9GYH0 126 aa1.24□□□□□ -2.21
SRGAP1-204ENST00000542381 SSC5DA1L4H1 1573 aa1.24□□□□□ -2.21
SRGAP1-204ENST00000542381 THOC2Q8NI27 1593 aaKnown RBP1.23□□□□□ -2.21
SRGAP1-204ENST00000542381 SPAG11BQ08648 103 aa1.23□□□□□ -2.21
SRGAP1-204ENST00000542381 SPAG11AQ6PDA7 123 aa1.23□□□□□ -2.21
SRGAP1-204ENST00000542381 DPH3P1Q9H4G8 78 aa1.23□□□□□ -2.21
SRGAP1-204ENST00000542381 ZFYVE16Q7Z3T8 1539 aa1.23□□□□□ -2.21
SRGAP1-204ENST00000542381 GOLGA3Q08378 1498 aa1.23□□□□□ -2.21
SRGAP1-204ENST00000542381 C10orf71Q711Q0 1435 aa1.23□□□□□ -2.21
SRGAP1-204ENST00000542381 CCNB3Q8WWL7 1395 aa1.22□□□□□ -2.21
SRGAP1-204ENST00000542381 ZNF236Q9UL36 1845 aa1.22□□□□□ -2.21
SRGAP1-204ENST00000542381 SETBP1Q9Y6X0 1596 aa1.22□□□□□ -2.21
SRGAP1-204ENST00000542381 TRBV7-3A0A075B6L6 115 aa1.22□□□□□ -2.21
SRGAP1-204ENST00000542381 RBP2P50120 134 aa1.22□□□□□ -2.21
SRGAP1-204ENST00000542381 SCAPERQ9BY12 1400 aa1.22□□□□□ -2.21
SRGAP1-204ENST00000542381 ASXL3Q9C0F0 2248 aa1.21□□□□□ -2.21
SRGAP1-204ENST00000542381 CACNA1HO95180 2353 aa1.21□□□□□ -2.22
SRGAP1-204ENST00000542381 ARHGAP5Q13017 1502 aa1.21□□□□□ -2.22
SRGAP1-204ENST00000542381 GCHFRP30047 84 aa1.21□□□□□ -2.22
SRGAP1-204ENST00000542381 GNG11P61952 73 aa1.21□□□□□ -2.22
SRGAP1-204ENST00000542381 DCDP81605 110 aaKnown RBP1.21□□□□□ -2.22
SRGAP1-204ENST00000542381 MGST2Q99735 147 aa1.21□□□□□ -2.22
SRGAP1-204ENST00000542381 FAM103A1Q9BTL3 118 aaKnown RBP1.21□□□□□ -2.22
SRGAP1-204ENST00000542381 NDUFA4L2Q9NRX3 87 aa1.21□□□□□ -2.22
SRGAP1-204ENST00000542381 RB1CC1Q8TDY2 1594 aa1.21□□□□□ -2.22
SRGAP1-204ENST00000542381 LAMC3Q9Y6N6 1575 aa1.21□□□□□ -2.22
SRGAP1-204ENST00000542381 KDM5AP29375 1690 aaKnown RBP1.2□□□□□ -2.22
SRGAP1-204ENST00000542381 CTXND1A0A1B0GTU2 59 aa1.2□□□□□ -2.22
SRGAP1-204ENST00000542381 TMEM218A2RU14 115 aa1.2□□□□□ -2.22
SRGAP1-204ENST00000542381 SNCAP37840 140 aa1.2□□□□□ -2.22
SRGAP1-204ENST00000542381 Q6ZRX8 168 aa1.2□□□□□ -2.22
SRGAP1-204ENST00000542381 DYNLRB1Q9NP97 96 aa1.2□□□□□ -2.22
SRGAP1-204ENST00000542381 CNTLNQ9NXG0 1405 aa1.2□□□□□ -2.22
SRGAP1-204ENST00000542381 CEP350Q5VT06 3117 aa1.2□□□□□ -2.22
SRGAP1-204ENST00000542381 TOPAZ1Q8N9V7 1692 aa1.2□□□□□ -2.22
SRGAP1-204ENST00000542381 VPS8Q8N3P4 1428 aa1.19□□□□□ -2.22
SRGAP1-204ENST00000542381 KIF21AQ7Z4S6 1674 aa1.19□□□□□ -2.22
SRGAP1-204ENST00000542381 ZMYM4Q5VZL5 1548 aa1.19□□□□□ -2.22
SRGAP1-204ENST00000542381 CHD1O14646 1710 aa1.18□□□□□ -2.22
SRGAP1-204ENST00000542381 KIAA1551Q9HCM1 1747 aa1.18□□□□□ -2.22
SRGAP1-204ENST00000542381 M0R135 149 aa1.18□□□□□ -2.22
SRGAP1-204ENST00000542381 CFAP126Q5VTH2 177 aa1.18□□□□□ -2.22
SRGAP1-204ENST00000542381 S100A10P60903 97 aa1.17□□□□□ -2.22
SRGAP1-204ENST00000542381 FAM213BQ8TBF2 198 aa1.17□□□□□ -2.22
SRGAP1-204ENST00000542381 C10orf95Q9H7T3 257 aa1.17□□□□□ -2.22
SRGAP1-204ENST00000542381 NPVFQ9HCQ7 196 aa1.17□□□□□ -2.22
SRGAP1-204ENST00000542381 CACNA1CQ13936 2221 aa1.17□□□□□ -2.22
SRGAP1-204ENST00000542381 SBF2Q86WG5 1849 aa1.17□□□□□ -2.22
SRGAP1-204ENST00000542381 TTC37Q6PGP7 1564 aa1.17□□□□□ -2.22
SRGAP1-204ENST00000542381 TOP2BQ02880 1626 aa1.16□□□□□ -2.22
SRGAP1-204ENST00000542381 AHCTF1Q8WYP5 2266 aa1.16□□□□□ -2.22
SRGAP1-204ENST00000542381 CHKB-CPT1BH3BT56 60 aa1.16□□□□□ -2.22
SRGAP1-204ENST00000542381 SPINK7P58062 85 aa1.16□□□□□ -2.22
SRGAP1-204ENST00000542381 UQCR10Q9UDW1 63 aa1.16□□□□□ -2.22
SRGAP1-204ENST00000542381 FBN2P35556 2912 aa1.16□□□□□ -2.22
SRGAP1-204ENST00000542381 BTAF1O14981 1849 aa1.15□□□□□ -2.22
SRGAP1-204ENST00000542381 WNK3Q9BYP7 1800 aa1.15□□□□□ -2.22
SRGAP1-204ENST00000542381 PDE4DIPQ5VU43 2346 aa1.15□□□□□ -2.23
SRGAP1-204ENST00000542381 TRAV30A0A087WSZ9 112 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms