RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 NHLRC4P0CG21 123 aaPredicted RBP10.96□□□□□ -0.66
CACNB1-206ENST00000539338 SPANXDQ9BXN6 97 aa10.96□□□□□ -0.66
CACNB1-206ENST00000539338 LGALS9O00182 355 aa10.95□□□□□ -0.66
CACNB1-206ENST00000539338 IGKV3D-7A0A0C4DH55 119 aa10.95□□□□□ -0.66
CACNB1-206ENST00000539338 LY6LH3BQJ8 138 aa10.95□□□□□ -0.66
CACNB1-206ENST00000539338 ACYP1P07311 99 aa10.95□□□□□ -0.66
CACNB1-206ENST00000539338 TNRC6BQ9UPQ9 1833 aaKnown RBP10.95□□□□□ -0.66
CACNB1-206ENST00000539338 NCR3O14931 201 aa10.94□□□□□ -0.66
CACNB1-206ENST00000539338 SS18L2Q9UHA2 77 aa10.94□□□□□ -0.66
CACNB1-206ENST00000539338 MIR7-3HGQ8N6C7 128 aa10.94□□□□□ -0.66
CACNB1-206ENST00000539338 NAV2Q8IVL1 2488 aa10.94□□□□□ -0.66
CACNB1-206ENST00000539338 UBE2BP63146 152 aa10.94□□□□□ -0.66
CACNB1-206ENST00000539338 NFE4Q86UQ8 179 aa10.94□□□□□ -0.66
CACNB1-206ENST00000539338 LECT2O14960 151 aa10.93□□□□□ -0.66
CACNB1-206ENST00000539338 ZFAND3Q9H8U3 227 aa10.93□□□□□ -0.66
CACNB1-206ENST00000539338 PIEZO2Q9H5I5 2752 aa10.93□□□□□ -0.66
CACNB1-206ENST00000539338 TMEM263Q8WUH6 116 aaKnown RBP10.92□□□□□ -0.66
CACNB1-206ENST00000539338 TRBV10-2A0A0K0K1G8 114 aa10.92□□□□□ -0.66
CACNB1-206ENST00000539338 NUPR2A6NF83 97 aa10.92□□□□□ -0.66
CACNB1-206ENST00000539338 G3V4G9 280 aa10.92□□□□□ -0.66
CACNB1-206ENST00000539338 Q6ZSV7 163 aa10.91□□□□□ -0.66
CACNB1-206ENST00000539338 Q6ZTI0 123 aa10.91□□□□□ -0.66
CACNB1-206ENST00000539338 A0A0B4J2C4 111 aa10.91□□□□□ -0.66
CACNB1-206ENST00000539338 TCL1BO95988 128 aa10.91□□□□□ -0.66
CACNB1-206ENST00000539338 IGLV2-11P01706 119 aa10.91□□□□□ -0.66
CACNB1-206ENST00000539338 NEXN-AS1Q8NBZ9 246 aa10.9□□□□□ -0.66
CACNB1-206ENST00000539338 IGKV2D-26A0A0A0MRZ7 120 aa10.9□□□□□ -0.66
CACNB1-206ENST00000539338 IGHV4-28A0A0C4DH34 117 aa10.9□□□□□ -0.66
CACNB1-206ENST00000539338 ETDCA0A1B0GVM5 59 aa10.9□□□□□ -0.66
CACNB1-206ENST00000539338 PTPRSQ13332 1948 aa10.9□□□□□ -0.66
CACNB1-206ENST00000539338 K7EQG2 157 aa10.9□□□□□ -0.66
CACNB1-206ENST00000539338 KLK12Q9UKR0 248 aa10.9□□□□□ -0.66
CACNB1-206ENST00000539338 U3KQK5 164 aa10.9□□□□□ -0.66
CACNB1-206ENST00000539338 EBI3Q14213 229 aa10.9□□□□□ -0.67
CACNB1-206ENST00000539338 HCFC1P51610 2035 aa10.9□□□□□ -0.67
CACNB1-206ENST00000539338 A0A0J9YXY3 114 aa10.89□□□□□ -0.67
CACNB1-206ENST00000539338 FAM236AA0A1B0GUQ0 79 aa10.89□□□□□ -0.67
CACNB1-206ENST00000539338 FAM236BA0A1B0GV22 79 aa10.89□□□□□ -0.67
CACNB1-206ENST00000539338 FSTL3O95633 263 aa10.89□□□□□ -0.67
CACNB1-206ENST00000539338 C10orf99Q6UWK7 81 aa10.89□□□□□ -0.67
CACNB1-206ENST00000539338 SMR3AQ99954 134 aa10.89□□□□□ -0.67
CACNB1-206ENST00000539338 RNF185Q96GF1 192 aa10.89□□□□□ -0.67
CACNB1-206ENST00000539338 IGF2RP11717 2491 aa10.89□□□□□ -0.67
CACNB1-206ENST00000539338 CEP192Q8TEP8 1941 aa10.89□□□□□ -0.67
CACNB1-206ENST00000539338 SPAG11BQ08648 103 aa10.88□□□□□ -0.67
CACNB1-206ENST00000539338 ZFAND2AQ8N6M9 145 aa10.88□□□□□ -0.67
CACNB1-206ENST00000539338 DSCAMO60469 2012 aa10.88□□□□□ -0.67
CACNB1-206ENST00000539338 MAPKAPK5-AS1Q8N8E1 139 aa10.88□□□□□ -0.67
CACNB1-206ENST00000539338 MIAQ16674 131 aa10.88□□□□□ -0.67
CACNB1-206ENST00000539338 SORL1Q92673 2214 aa10.88□□□□□ -0.67
CACNB1-206ENST00000539338 KRTAP10-9P60411 292 aa10.88□□□□□ -0.67
CACNB1-206ENST00000539338 C2CD3Q4AC94 2353 aa10.87□□□□□ -0.67
CACNB1-206ENST00000539338 TRAV10A0A0B4J240 114 aa10.87□□□□□ -0.67
CACNB1-206ENST00000539338 TRBV10-1A0A0K0K1A3 114 aa10.87□□□□□ -0.67
CACNB1-206ENST00000539338 NDUFA1O15239 70 aa10.87□□□□□ -0.67
CACNB1-206ENST00000539338 LINC00467Q9BRT7 94 aa10.87□□□□□ -0.67
CACNB1-206ENST00000539338 H3BT86 120 aa10.87□□□□□ -0.67
CACNB1-206ENST00000539338 C11orf71Q6IPW1 123 aa10.86□□□□□ -0.67
CACNB1-206ENST00000539338 A0A1B0GX51 115 aa10.86□□□□□ -0.67
CACNB1-206ENST00000539338 HIST2H2BDQ6DRA6 164 aa10.86□□□□□ -0.67
CACNB1-206ENST00000539338 LINC01006Q8NI28 216 aa10.86□□□□□ -0.67
CACNB1-206ENST00000539338 ODF3Q96PU9 254 aa10.86□□□□□ -0.67
CACNB1-206ENST00000539338 PRO0255Q9UI72 69 aa10.86□□□□□ -0.67
CACNB1-206ENST00000539338 RBM3P98179 157 aaKnown RBP10.86□□□□□ -0.67
CACNB1-206ENST00000539338 C4orf48Q5BLP8 95 aa10.86□□□□□ -0.67
CACNB1-206ENST00000539338 CDKN2A-AS1Q9UH64 79 aa10.85□□□□□ -0.67
CACNB1-206ENST00000539338 FUSP35637 526 aaKnown RBP eCLIP10.85□□□□□ -0.67
CACNB1-206ENST00000539338 HIVEP3Q5T1R4 2406 aa10.85□□□□□ -0.67
CACNB1-206ENST00000539338 MYO18BQ8IUG5 2567 aa10.85□□□□□ -0.67
CACNB1-206ENST00000539338 CCDC168Q8NDH2 2452 aa10.85□□□□□ -0.67
CACNB1-206ENST00000539338 TRAV26-1A0A087WT03 109 aa10.84□□□□□ -0.67
CACNB1-206ENST00000539338 NAV3Q8IVL0 2385 aa10.84□□□□□ -0.67
CACNB1-206ENST00000539338 IGLV4-3A0A075B6K6 122 aa10.84□□□□□ -0.67
CACNB1-206ENST00000539338 ZNF22P17026 224 aaPredicted RBP10.84□□□□□ -0.67
CACNB1-206ENST00000539338 PROK1P58294 105 aa10.84□□□□□ -0.67
CACNB1-206ENST00000539338 DEFB114Q30KQ6 69 aa10.84□□□□□ -0.67
CACNB1-206ENST00000539338 FSHBP01225 129 aa10.83□□□□□ -0.68
CACNB1-206ENST00000539338 CXCL5P42830 114 aa10.83□□□□□ -0.68
CACNB1-206ENST00000539338 TIRAPP58753 221 aa10.83□□□□□ -0.68
CACNB1-206ENST00000539338 SMIM9A6NGZ8 99 aa10.83□□□□□ -0.68
CACNB1-206ENST00000539338 LRP4O75096 1905 aa10.83□□□□□ -0.68
CACNB1-206ENST00000539338 C11orf21Q9P2W6 132 aa10.83□□□□□ -0.68
CACNB1-206ENST00000539338 M0QY20 66 aa10.82□□□□□ -0.68
CACNB1-206ENST00000539338 PRR9Q5T870 116 aa10.82□□□□□ -0.68
CACNB1-206ENST00000539338 TMEM223A0PJW6 202 aa10.82□□□□□ -0.68
CACNB1-206ENST00000539338 NDUFS5O43920 106 aa10.82□□□□□ -0.68
CACNB1-206ENST00000539338 GAS8-AS1O95177 125 aa10.82□□□□□ -0.68
CACNB1-206ENST00000539338 C14orf132Q9NPU4 83 aa10.82□□□□□ -0.68
CACNB1-206ENST00000539338 ARHGAP32A7KAX9 2087 aa10.82□□□□□ -0.68
CACNB1-206ENST00000539338 DEFB131BA0A096LNP1 70 aa10.81□□□□□ -0.68
CACNB1-206ENST00000539338 Q8N6K4 173 aa10.81□□□□□ -0.68
CACNB1-206ENST00000539338 ATOX1O00244 68 aa10.81□□□□□ -0.68
CACNB1-206ENST00000539338 SMIM20Q8N5G0 67 aa10.81□□□□□ -0.68
CACNB1-206ENST00000539338 JMJD7-PLA2G4BH0Y9G9 81 aa10.81□□□□□ -0.68
CACNB1-206ENST00000539338 LINC00269Q8N2A0 174 aa10.81□□□□□ -0.68
CACNB1-206ENST00000539338 ATG2AQ2TAZ0 1938 aa10.8□□□□□ -0.68
CACNB1-206ENST00000539338 PSMB8P28062 276 aa10.8□□□□□ -0.68
CACNB1-206ENST00000539338 NREPQ16612 68 aa10.8□□□□□ -0.68
CACNB1-206ENST00000539338 DIRC1Q969H9 104 aa10.8□□□□□ -0.68
CACNB1-206ENST00000539338 CITED1Q99966 193 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms