RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 C18orf65Q6ZTR6 163 aa11.15□□□□□ -0.62
PCDHA9-202ENST00000532602 Q6ZTI0 123 aa11.15□□□□□ -0.62
PCDHA9-202ENST00000532602 UFSP1Q6NVU6 142 aa11.15□□□□□ -0.63
PCDHA9-202ENST00000532602 C20orf173Q96LM9 149 aa11.14□□□□□ -0.63
PCDHA9-202ENST00000532602 MIR7-3HGQ8N6C7 128 aa11.14□□□□□ -0.63
PCDHA9-202ENST00000532602 FRMD6-AS1P0C7T7 363 aa11.14□□□□□ -0.63
PCDHA9-202ENST00000532602 ANKRD39Q53RE8 183 aa11.14□□□□□ -0.63
PCDHA9-202ENST00000532602 DAND5Q8N907 189 aa11.14□□□□□ -0.63
PCDHA9-202ENST00000532602 NUPR1O60356 82 aa11.13□□□□□ -0.63
PCDHA9-202ENST00000532602 HIGD1BQ9P298 99 aa11.13□□□□□ -0.63
PCDHA9-202ENST00000532602 C19orf71A6NCJ1 209 aa11.13□□□□□ -0.63
PCDHA9-202ENST00000532602 P0C879 139 aa11.13□□□□□ -0.63
PCDHA9-202ENST00000532602 A0A1B0GX51 115 aa11.13□□□□□ -0.63
PCDHA9-202ENST00000532602 REG3AQ06141 175 aa11.13□□□□□ -0.63
PCDHA9-202ENST00000532602 SPANXCQ9NY87 97 aa11.13□□□□□ -0.63
PCDHA9-202ENST00000532602 IGKV2-24A0A0C4DH68 120 aa11.12□□□□□ -0.63
PCDHA9-202ENST00000532602 ZNF80P51504 273 aaPredicted RBP11.12□□□□□ -0.63
PCDHA9-202ENST00000532602 Q6ZS46 218 aa11.12□□□□□ -0.63
PCDHA9-202ENST00000532602 KRTAP10-9P60411 292 aa11.12□□□□□ -0.63
PCDHA9-202ENST00000532602 LY6LH3BQJ8 138 aa11.12□□□□□ -0.63
PCDHA9-202ENST00000532602 CHKB-CPT1BH3BT56 60 aa11.12□□□□□ -0.63
PCDHA9-202ENST00000532602 LECT2O14960 151 aa11.12□□□□□ -0.63
PCDHA9-202ENST00000532602 CRYGDP07320 174 aa11.12□□□□□ -0.63
PCDHA9-202ENST00000532602 H7C423 109 aa11.11□□□□□ -0.63
PCDHA9-202ENST00000532602 CEMP1Q6PRD7 247 aaPredicted RBP11.11□□□□□ -0.63
PCDHA9-202ENST00000532602 KIR2DL5BQ8NHK3 375 aa11.11□□□□□ -0.63
PCDHA9-202ENST00000532602 PDE6GP18545 87 aa11.11□□□□□ -0.63
PCDHA9-202ENST00000532602 HIGD2BQ4VC39 106 aa11.11□□□□□ -0.63
PCDHA9-202ENST00000532602 CDPF1Q6NVV7 123 aa11.11□□□□□ -0.63
PCDHA9-202ENST00000532602 ZFAND2AQ8N6M9 145 aa11.11□□□□□ -0.63
PCDHA9-202ENST00000532602 TNRC6BQ9UPQ9 1833 aaKnown RBP11.11□□□□□ -0.63
PCDHA9-202ENST00000532602 COX7BP24311 80 aa11.11□□□□□ -0.63
PCDHA9-202ENST00000532602 LINC01620Q4KN68 170 aa11.11□□□□□ -0.63
PCDHA9-202ENST00000532602 DOPEY1Q5JWR5 2465 aa11.11□□□□□ -0.63
PCDHA9-202ENST00000532602 LINC00269Q8N2A0 174 aa11.1□□□□□ -0.63
PCDHA9-202ENST00000532602 C11orf1Q9H5F2 150 aa11.1□□□□□ -0.63
PCDHA9-202ENST00000532602 TMEM258P61165 79 aa11.1□□□□□ -0.63
PCDHA9-202ENST00000532602 ABCA2Q9BZC7 2435 aa11.1□□□□□ -0.63
PCDHA9-202ENST00000532602 KIR2DL5BA0A0G2JN68 375 aa11.09□□□□□ -0.63
PCDHA9-202ENST00000532602 KIR2DL5BA0A0G2JPC4 375 aa11.09□□□□□ -0.63
PCDHA9-202ENST00000532602 Q6ZUT4 128 aa11.09□□□□□ -0.63
PCDHA9-202ENST00000532602 KIR2DL5AQ8N109 375 aa11.09□□□□□ -0.63
PCDHA9-202ENST00000532602 PSMG3-AS1Q96PY0 264 aa11.09□□□□□ -0.63
PCDHA9-202ENST00000532602 CRYGBP07316 175 aa11.09□□□□□ -0.63
PCDHA9-202ENST00000532602 RS1O15537 224 aa11.09□□□□□ -0.63
PCDHA9-202ENST00000532602 GDF5OSQ5U4N7 250 aa11.09□□□□□ -0.63
PCDHA9-202ENST00000532602 TRAV10A0A0B4J240 114 aa11.09□□□□□ -0.63
PCDHA9-202ENST00000532602 RBM3P98179 157 aaKnown RBP11.08□□□□□ -0.64
PCDHA9-202ENST00000532602 ZNF702PQ9H963 129 aa11.08□□□□□ -0.64
PCDHA9-202ENST00000532602 A0A0B4J2C4 111 aa11.08□□□□□ -0.64
PCDHA9-202ENST00000532602 TMEM256-PLSCR3K7ERE1 68 aa11.08□□□□□ -0.64
PCDHA9-202ENST00000532602 EIF4EBP1Q13541 118 aaPredicted RBP11.08□□□□□ -0.64
PCDHA9-202ENST00000532602 PRR14LQ5THK1 2151 aa11.08□□□□□ -0.64
PCDHA9-202ENST00000532602 PRB2P02812 416 aaPredicted RBP11.07□□□□□ -0.64
PCDHA9-202ENST00000532602 ODF1Q14990 250 aa11.07□□□□□ -0.64
PCDHA9-202ENST00000532602 CHCHD10Q8WYQ3 142 aaPredicted RBP11.07□□□□□ -0.64
PCDHA9-202ENST00000532602 LINC00322Q6ZN03 302 aaPredicted RBP11.07□□□□□ -0.64
PCDHA9-202ENST00000532602 HIGD2AQ9BW72 106 aa11.07□□□□□ -0.64
PCDHA9-202ENST00000532602 WFDC10AQ9H1F0 79 aa11.06□□□□□ -0.64
PCDHA9-202ENST00000532602 NPSP0C0P6 89 aa11.06□□□□□ -0.64
PCDHA9-202ENST00000532602 LINC01006Q8NI28 216 aa11.06□□□□□ -0.64
PCDHA9-202ENST00000532602 TRBV6-4A0A1B0GX49 114 aa11.05□□□□□ -0.64
PCDHA9-202ENST00000532602 COL5A1P20908 1838 aaPredicted RBP11.05□□□□□ -0.64
PCDHA9-202ENST00000532602 ZNF295-AS1Q8N0V1 137 aa11.05□□□□□ -0.64
PCDHA9-202ENST00000532602 H3BT86 120 aa11.05□□□□□ -0.64
PCDHA9-202ENST00000532602 NFE4Q86UQ8 179 aa11.05□□□□□ -0.64
PCDHA9-202ENST00000532602 IGLC6P0CF74 106 aa11.05□□□□□ -0.64
PCDHA9-202ENST00000532602 TTTY13Q9BZ97 58 aa11.05□□□□□ -0.64
PCDHA9-202ENST00000532602 TEN1Q86WV5 123 aa11.04□□□□□ -0.64
PCDHA9-202ENST00000532602 ZFAND3Q9H8U3 227 aa11.04□□□□□ -0.64
PCDHA9-202ENST00000532602 IGF2RP11717 2491 aa11.04□□□□□ -0.64
PCDHA9-202ENST00000532602 C10orf142B7Z368 130 aa11.03□□□□□ -0.64
PCDHA9-202ENST00000532602 RAI1Q7Z5J4 1906 aaPredicted RBP11.03□□□□□ -0.64
PCDHA9-202ENST00000532602 PSMB8P28062 276 aa11.03□□□□□ -0.64
PCDHA9-202ENST00000532602 FXYD2P54710 66 aa11.03□□□□□ -0.64
PCDHA9-202ENST00000532602 H0Y9J4 135 aa11.03□□□□□ -0.64
PCDHA9-202ENST00000532602 AVPP01185 164 aa11.03□□□□□ -0.64
PCDHA9-202ENST00000532602 MIAQ16674 131 aa11.03□□□□□ -0.64
PCDHA9-202ENST00000532602 A0A087WZ39 114 aa11.02□□□□□ -0.64
PCDHA9-202ENST00000532602 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.02□□□□□ -0.65
PCDHA9-202ENST00000532602 C7orf33Q8WU49 177 aa11.02□□□□□ -0.65
PCDHA9-202ENST00000532602 TDRG1Q3Y452 100 aa11.02□□□□□ -0.65
PCDHA9-202ENST00000532602 TRBV10-2A0A0K0K1G8 114 aa11.02□□□□□ -0.65
PCDHA9-202ENST00000532602 UTRNP46939 3433 aa11.02□□□□□ -0.65
PCDHA9-202ENST00000532602 A0A1B0GXF2 115 aa11.01□□□□□ -0.65
PCDHA9-202ENST00000532602 PRM2P04554 102 aa11.01□□□□□ -0.65
PCDHA9-202ENST00000532602 TRBV6-8A0A0A6YYG3 113 aa11.01□□□□□ -0.65
PCDHA9-202ENST00000532602 SMIM20Q8N5G0 67 aa11.01□□□□□ -0.65
PCDHA9-202ENST00000532602 ATOX1O00244 68 aa11.01□□□□□ -0.65
PCDHA9-202ENST00000532602 PROK1P58294 105 aa11.01□□□□□ -0.65
PCDHA9-202ENST00000532602 FAM19A1Q7Z5A9 133 aa11□□□□□ -0.65
PCDHA9-202ENST00000532602 SPATA12Q7Z6I5 190 aa11□□□□□ -0.65
PCDHA9-202ENST00000532602 LINC00467Q9BRT7 94 aa11□□□□□ -0.65
PCDHA9-202ENST00000532602 NEXN-AS1Q8NBZ9 246 aa11□□□□□ -0.65
PCDHA9-202ENST00000532602 MLST8Q9BVC4 326 aa11□□□□□ -0.65
PCDHA9-202ENST00000532602 IGKV3D-7A0A0C4DH55 119 aa10.99□□□□□ -0.65
PCDHA9-202ENST00000532602 CFAP126Q5VTH2 177 aa10.99□□□□□ -0.65
PCDHA9-202ENST00000532602 WFDC9Q8NEX5 89 aa10.99□□□□□ -0.65
PCDHA9-202ENST00000532602 SYCNQ0VAF6 134 aa10.99□□□□□ -0.65
PCDHA9-202ENST00000532602 MYO9AB2RTY4 2548 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms