RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
PTPRK-221ENST00000532331 MYO18BQ8IUG5 2567 aa8.47□□□□□ -1.05
PTPRK-221ENST00000532331 C20orf203Q8NBC4 194 aa8.47□□□□□ -1.05
PTPRK-221ENST00000532331 UBE2AP49459 152 aa8.47□□□□□ -1.05
PTPRK-221ENST00000532331 ABCA2Q9BZC7 2435 aa8.47□□□□□ -1.05
PTPRK-221ENST00000532331 E9PLD3 99 aa8.47□□□□□ -1.05
PTPRK-221ENST00000532331 CRIP3Q6Q6R5 217 aa8.47□□□□□ -1.05
PTPRK-221ENST00000532331 KIR2DL5BQ8NHK3 375 aa8.46□□□□□ -1.05
PTPRK-221ENST00000532331 NACAE9PAV3 2078 aa8.46□□□□□ -1.05
PTPRK-221ENST00000532331 IGHV4-28A0A0C4DH34 117 aa8.46□□□□□ -1.06
PTPRK-221ENST00000532331 IGLV1-40P01703 118 aa8.46□□□□□ -1.06
PTPRK-221ENST00000532331 PCNX3Q9H6A9 2034 aa8.46□□□□□ -1.06
PTPRK-221ENST00000532331 PRR14LQ5THK1 2151 aa8.46□□□□□ -1.06
PTPRK-221ENST00000532331 TNCP24821 2201 aa8.46□□□□□ -1.06
PTPRK-221ENST00000532331 TLN1Q9Y490 2541 aaKnown RBP8.46□□□□□ -1.06
PTPRK-221ENST00000532331 H3BQ85 93 aa8.46□□□□□ -1.06
PTPRK-221ENST00000532331 CCL25O15444 150 aa8.46□□□□□ -1.06
PTPRK-221ENST00000532331 NDUFS5O43920 106 aa8.45□□□□□ -1.06
PTPRK-221ENST00000532331 ZNF80P51504 273 aaPredicted RBP8.45□□□□□ -1.06
PTPRK-221ENST00000532331 EIF4EBP1Q13541 118 aaPredicted RBP8.45□□□□□ -1.06
PTPRK-221ENST00000532331 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
PTPRK-221ENST00000532331 HIGD1BQ9P298 99 aa8.45□□□□□ -1.06
PTPRK-221ENST00000532331 WNK1Q9H4A3 2382 aa8.45□□□□□ -1.06
PTPRK-221ENST00000532331 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
PTPRK-221ENST00000532331 CRYBA4P53673 196 aa8.45□□□□□ -1.06
PTPRK-221ENST00000532331 DAND5Q8N907 189 aa8.45□□□□□ -1.06
PTPRK-221ENST00000532331 NCR3O14931 201 aa8.44□□□□□ -1.06
PTPRK-221ENST00000532331 CDPF1Q6NVV7 123 aa8.44□□□□□ -1.06
PTPRK-221ENST00000532331 CITED1Q99966 193 aa8.44□□□□□ -1.06
PTPRK-221ENST00000532331 ZFAND3Q9H8U3 227 aa8.44□□□□□ -1.06
PTPRK-221ENST00000532331 IGHV1-58A0A0C4DH39 117 aa8.44□□□□□ -1.06
PTPRK-221ENST00000532331 C16orf95Q9H693 158 aa8.44□□□□□ -1.06
PTPRK-221ENST00000532331 ACYP1P07311 99 aa8.44□□□□□ -1.06
PTPRK-221ENST00000532331 TRACP01848 142 aa8.44□□□□□ -1.06
PTPRK-221ENST00000532331 IGHV4-30-4P0DP06 118 aa8.44□□□□□ -1.06
PTPRK-221ENST00000532331 TP53TG3Q9ULZ0 132 aa8.44□□□□□ -1.06
PTPRK-221ENST00000532331 ODF1Q14990 250 aa8.43□□□□□ -1.06
PTPRK-221ENST00000532331 IGLV2-18A0A075B6J9 118 aa8.43□□□□□ -1.06
PTPRK-221ENST00000532331 FRMD6-AS1P0C7T7 363 aa8.43□□□□□ -1.06
PTPRK-221ENST00000532331 C20orf173Q96LM9 149 aa8.43□□□□□ -1.06
PTPRK-221ENST00000532331 WFDC10AQ9H1F0 79 aa8.43□□□□□ -1.06
PTPRK-221ENST00000532331 CHD8Q9HCK8 2581 aa8.43□□□□□ -1.06
PTPRK-221ENST00000532331 NFE4Q86UQ8 179 aa8.42□□□□□ -1.06
PTPRK-221ENST00000532331 M0R2N4 97 aa8.42□□□□□ -1.06
PTPRK-221ENST00000532331 A0A1B0GXF2 115 aa8.42□□□□□ -1.06
PTPRK-221ENST00000532331 IGLV2-8P01709 118 aa8.42□□□□□ -1.06
PTPRK-221ENST00000532331 MIR7-3HGQ8N6C7 128 aa8.42□□□□□ -1.06
PTPRK-221ENST00000532331 Q6ZUT4 128 aa8.42□□□□□ -1.06
PTPRK-221ENST00000532331 TTTY13Q9BZ97 58 aa8.42□□□□□ -1.06
PTPRK-221ENST00000532331 IGKV2-24A0A0C4DH68 120 aa8.41□□□□□ -1.06
PTPRK-221ENST00000532331 TDRG1Q3Y452 100 aa8.41□□□□□ -1.06
PTPRK-221ENST00000532331 IGLC6P0CF74 106 aa8.41□□□□□ -1.06
PTPRK-221ENST00000532331 P0DMU3 169 aa8.41□□□□□ -1.06
PTPRK-221ENST00000532331 FAM231AP0DMU4 169 aa8.41□□□□□ -1.06
PTPRK-221ENST00000532331 FAM231CP0DMU5 169 aa8.41□□□□□ -1.06
PTPRK-221ENST00000532331 LINC00322Q6ZN03 302 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-221ENST00000532331 DIRC1Q969H9 104 aa8.41□□□□□ -1.06
PTPRK-221ENST00000532331 FXYD2P54710 66 aa8.41□□□□□ -1.06
PTPRK-221ENST00000532331 A0A0J9YWU9 116 aa8.41□□□□□ -1.06
PTPRK-221ENST00000532331 NUPR2A6NF83 97 aa8.4□□□□□ -1.06
PTPRK-221ENST00000532331 REG3AQ06141 175 aa8.4□□□□□ -1.06
PTPRK-221ENST00000532331 CEMP1Q6PRD7 247 aaPredicted RBP8.4□□□□□ -1.06
PTPRK-221ENST00000532331 NDUFB1O75438 58 aa8.4□□□□□ -1.06
PTPRK-221ENST00000532331 LINC01620Q4KN68 170 aa8.4□□□□□ -1.06
PTPRK-221ENST00000532331 MLST8Q9BVC4 326 aa8.4□□□□□ -1.06
PTPRK-221ENST00000532331 RS1O15537 224 aa8.4□□□□□ -1.06
PTPRK-221ENST00000532331 LINC00269Q8N2A0 174 aa8.4□□□□□ -1.06
PTPRK-221ENST00000532331 HIGD2BQ4VC39 106 aa8.39□□□□□ -1.07
PTPRK-221ENST00000532331 ZFAND2AQ8N6M9 145 aa8.39□□□□□ -1.07
PTPRK-221ENST00000532331 LECT2O14960 151 aa8.39□□□□□ -1.07
PTPRK-221ENST00000532331 GDF5OSQ5U4N7 250 aa8.39□□□□□ -1.07
PTPRK-221ENST00000532331 KIAA1549Q9HCM3 1950 aa8.38□□□□□ -1.07
PTPRK-221ENST00000532331 KPRPQ5T749 579 aaPredicted RBP8.38□□□□□ -1.07
PTPRK-221ENST00000532331 JMJD7-PLA2G4BH0Y9G9 81 aa8.38□□□□□ -1.07
PTPRK-221ENST00000532331 NANOS2P60321 138 aaKnown RBP8.38□□□□□ -1.07
PTPRK-221ENST00000532331 NREPQ16612 68 aa8.38□□□□□ -1.07
PTPRK-221ENST00000532331 H7C423 109 aa8.38□□□□□ -1.07
PTPRK-221ENST00000532331 CEP295Q9C0D2 2601 aa8.38□□□□□ -1.07
PTPRK-221ENST00000532331 ANKRD11Q6UB99 2663 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-221ENST00000532331 A0A0B4J2C4 111 aa8.37□□□□□ -1.07
PTPRK-221ENST00000532331 UFSP1Q6NVU6 142 aa8.37□□□□□ -1.07
PTPRK-221ENST00000532331 U3KQK5 164 aa8.37□□□□□ -1.07
PTPRK-221ENST00000532331 SPATA12Q7Z6I5 190 aa8.37□□□□□ -1.07
PTPRK-221ENST00000532331 SPTBN4Q9H254 2564 aa8.36□□□□□ -1.07
PTPRK-221ENST00000532331 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.36□□□□□ -1.07
PTPRK-221ENST00000532331 TRBV6-4A0A1B0GX49 114 aa8.36□□□□□ -1.07
PTPRK-221ENST00000532331 MIAQ16674 131 aa8.35□□□□□ -1.07
PTPRK-221ENST00000532331 TEN1Q86WV5 123 aa8.35□□□□□ -1.07
PTPRK-221ENST00000532331 LINC00467Q9BRT7 94 aa8.35□□□□□ -1.07
PTPRK-221ENST00000532331 NEXN-AS1Q8NBZ9 246 aa8.35□□□□□ -1.07
PTPRK-221ENST00000532331 C7orf33Q8WU49 177 aa8.35□□□□□ -1.07
PTPRK-221ENST00000532331 B9D2Q9BPU9 175 aa8.35□□□□□ -1.07
PTPRK-221ENST00000532331 COX7BP24311 80 aa8.35□□□□□ -1.07
PTPRK-221ENST00000532331 CHCHD10Q8WYQ3 142 aaPredicted RBP8.35□□□□□ -1.07
PTPRK-221ENST00000532331 IGLV1-51P01701 117 aa8.35□□□□□ -1.07
PTPRK-221ENST00000532331 CFAP126Q5VTH2 177 aa8.35□□□□□ -1.07
PTPRK-221ENST00000532331 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.07
PTPRK-221ENST00000532331 CLEC2BQ92478 149 aa8.34□□□□□ -1.07
PTPRK-221ENST00000532331 LRCOL1A6NCL2 159 aa8.34□□□□□ -1.07
PTPRK-221ENST00000532331 TMEM256-PLSCR3K7ERE1 68 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms