RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 SNX29P2Q8IUI4 249 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 OR8I2Q8N0Y5 310 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 IFI27L1Q96BM0 104 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 BATF3Q9NR55 127 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 PRO0255Q9UI72 69 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 NOP16Q9Y3C1 178 aaKnown RBP-0.49□□□□□ -2.49
NUP98-218ENST00000530516 CSPG4Q6UVK1 2322 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 NWD2Q9ULI1 1742 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 DMXL1Q9Y485 3027 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 ZNF815PA8K554 130 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 J3QLW9 94 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 SPINK8P0C7L1 97 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 G0S2P27469 103 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 GNG10P50151 68 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 TFAMQ00059 246 aaKnown RBP-0.5□□□□□ -2.49
NUP98-218ENST00000530516 TMEM128Q5BJH2 165 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 Q5VSD8 79 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 SSBP3-AS1Q7Z2R9 100 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 C20orf197Q8N268 126 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 TMEM35BQ8NCS4 154 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 CDC26Q8NHZ8 85 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 MAGOHBQ96A72 148 aaKnown RBP-0.5□□□□□ -2.49
NUP98-218ENST00000530516 CENPHQ9H3R5 247 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 CALML5Q9NZT1 146 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 SMPXQ9UHP9 88 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 BOD1L1Q8NFC6 3051 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.5□□□□□ -2.49
NUP98-218ENST00000530516 MYO9AB2RTY4 2548 aa-0.5□□□□□ -2.49
NUP98-218ENST00000530516 FRYQ5TBA9 3013 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 DMDP11532 3685 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 NBASA2RRP1 2371 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 J3KT08 172 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 ACACBO00763 2458 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 LRRC37A3O60309 1634 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 SMIM24O75264 130 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 PAEPP09466 180 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 HLA-DRB4P13762 266 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 NPC2P61916 151 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 SPCS2Q15005 226 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 KRTAP19-6Q3LI70 58 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 MYO7BQ6PIF6 2116 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 SPG11Q96JI7 2443 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 BANF2Q9H503 90 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 TLN1Q9Y490 2541 aaKnown RBP-0.51□□□□□ -2.49
NUP98-218ENST00000530516 DNAJC15Q9Y5T4 150 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 HLA-DRB4X5D2U9 266 aa-0.51□□□□□ -2.49
NUP98-218ENST00000530516 TSC2P49815 1807 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 ATMQ13315 3056 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 ADGRG4Q8IZF6 3080 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 BPTFQ12830 3046 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 TRGV1A0A0A0MS02 117 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 TRAV12-3A0A0B4J271 114 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 TRBV10-3A0A0K0K1G6 114 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 PIN1P1O15428 100 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 PRM1P04553 51 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 RPS28P62857 69 aaKnown RBP-0.52□□□□□ -2.49
NUP98-218ENST00000530516 ATP11AUNQ6ZP68 121 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 SKA2Q8WVK7 121 aaPredicted RBP-0.52□□□□□ -2.49
NUP98-218ENST00000530516 SPRR2FQ96RM1 72 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 V9GYQ6 96 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 ACACAQ13085 2346 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 USF3Q68DE3 2245 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 C5orf42Q9H799 3197 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 REV3LO60673 3130 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 COL14A1Q05707 1796 aaKnown RBP-0.52□□□□□ -2.49
NUP98-218ENST00000530516 PRDM2Q13029 1718 aa-0.52□□□□□ -2.49
NUP98-218ENST00000530516 LAMC1P11047 1609 aa-0.53□□□□□ -2.49
NUP98-218ENST00000530516 TRANK1O15050 2925 aa-0.53□□□□□ -2.49
NUP98-218ENST00000530516 G3V318 75 aa-0.53□□□□□ -2.49
NUP98-218ENST00000530516 S100GP29377 79 aa-0.53□□□□□ -2.49
NUP98-218ENST00000530516 PRUNE2Q8WUY3 3088 aa-0.53□□□□□ -2.49
NUP98-218ENST00000530516 SPTA1P02549 2419 aa-0.53□□□□□ -2.49
NUP98-218ENST00000530516 LRBAP50851 2863 aa-0.53□□□□□ -2.49
NUP98-218ENST00000530516 TLN2Q9Y4G6 2542 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 FAM186AA6NE01 2351 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 VPS13CQ709C8 3753 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 TRIOO75962 3097 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 CSMD2Q7Z408 3487 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 TRAV36DV7A0A075B6V5 113 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 TRAV22A0A0B4J277 110 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 A0A1B0GX51 115 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 M0R2P5 195 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 SCTP09683 121 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 MT1HL1P0DM35 61 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 MT1HP80294 61 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 KLK9Q2XQG4 91 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 BCL9LQ86UU0 1499 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 DOCK2Q92608 1830 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 SPEF2Q9C093 1822 aa-0.54□□□□□ -2.5
NUP98-218ENST00000530516 ZNF609O15014 1411 aa-0.55□□□□□ -2.5
NUP98-218ENST00000530516 TRAV1-2A0A0B4J238 106 aa-0.55□□□□□ -2.5
NUP98-218ENST00000530516 MT-ND4LP03901 98 aa-0.55□□□□□ -2.5
NUP98-218ENST00000530516 MT1BP07438 61 aa-0.55□□□□□ -2.5
NUP98-218ENST00000530516 EDDM3BP56851 147 aa-0.55□□□□□ -2.5
NUP98-218ENST00000530516 CLLU1Q5K131 121 aa-0.55□□□□□ -2.5
NUP98-218ENST00000530516 Q5VV11 94 aa-0.55□□□□□ -2.5
NUP98-218ENST00000530516 PPP1R2P3Q6NXS1 205 aa-0.55□□□□□ -2.5
NUP98-218ENST00000530516 TCTE3Q8IZS6 198 aa-0.55□□□□□ -2.5
NUP98-218ENST00000530516 DDA1Q9BW61 102 aa-0.55□□□□□ -2.5
NUP98-218ENST00000530516 ERCC6Q03468 1493 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms