RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 IGKV3D-11A0A0A0MRZ8 115 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 PIGBOS1A0A0B4J2F0 54 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 UMAD1C9J7I0 102 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 IGKV1-17P01599 117 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 RBM3P98179 157 aaKnown RBP2.63□□□□□ -1.99
SKP1-211ENST00000523359 SSBP1Q04837 148 aaKnown RBP2.63□□□□□ -1.99
SKP1-211ENST00000523359 SLC48A1Q6P1K1 146 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 SERP2Q8N6R1 65 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 SMIM4Q8WVI0 70 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 PPDPFLQ8WWR9 84 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 TVP23CQ96ET8 276 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 CYSTM1Q9H1C7 97 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 ABRACLQ9P1F3 81 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 LINC00474Q9P2X8 69 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 LHFPL6Q9Y693 200 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 RGPD8O14715 1765 aaPredicted RBP2.63□□□□□ -1.99
SKP1-211ENST00000523359 KDM3BQ7LBC6 1761 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 RGPD5Q99666 1765 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 COL4A5P29400 1685 aa2.63□□□□□ -1.99
SKP1-211ENST00000523359 RGPD1P0DJD0 1748 aa2.62□□□□□ -1.99
SKP1-211ENST00000523359 TRBV6-7A0A0A0MS04 114 aa2.62□□□□□ -1.99
SKP1-211ENST00000523359 LOC107984156A0A0G2JMH3 177 aa2.62□□□□□ -1.99
SKP1-211ENST00000523359 CCL16O15467 120 aa2.62□□□□□ -1.99
SKP1-211ENST00000523359 KRTDAPP60985 99 aa2.62□□□□□ -1.99
SKP1-211ENST00000523359 C9orf116Q5BN46 136 aaPredicted RBP2.62□□□□□ -1.99
SKP1-211ENST00000523359 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.62□□□□□ -1.99
SKP1-211ENST00000523359 ARL17AQ8IVW1 177 aa2.62□□□□□ -1.99
SKP1-211ENST00000523359 TRGV9Q99603 122 aa2.62□□□□□ -1.99
SKP1-211ENST00000523359 MGST2Q99735 147 aa2.62□□□□□ -1.99
SKP1-211ENST00000523359 PSORS1C2Q9UIG4 136 aa2.62□□□□□ -1.99
SKP1-211ENST00000523359 C4AP0C0L4 1744 aa2.62□□□□□ -1.99
SKP1-211ENST00000523359 C4BP0C0L5 1744 aa2.62□□□□□ -1.99
SKP1-211ENST00000523359 RGPD2P0DJD1 1756 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 BTAF1O14981 1849 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 MROH2AA6NES4 1674 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 TRAV12-1A0A0B4J245 112 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 TRAV17A0A0B4J275 112 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 A0A0J9YX75 114 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 A0A1W2PPM0 123 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 FXYD1O00168 92 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 SNRPGP62308 76 aaKnown RBP2.61□□□□□ -1.99
SKP1-211ENST00000523359 DEFB113Q30KQ7 82 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 ZNF791Q3KP31 576 aaPredicted RBP2.61□□□□□ -1.99
SKP1-211ENST00000523359 BVES-AS1Q5T3Y7 98 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 ZNF833PQ6ZTB9 187 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 C9orf163Q8N9P6 203 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 OR8B3Q8NGG8 313 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 CYP4F30PQ9H0H9 118 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 SPCS1Q9Y6A9 102 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 NWD2Q9ULI1 1742 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 SDK2Q58EX2 2172 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 KCPQ6ZWJ8 1503 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 DOCK2Q92608 1830 aa2.61□□□□□ -1.99
SKP1-211ENST00000523359 DEPDC5O75140 1603 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 FREM3P0C091 2139 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 TNRC18O15417 2968 aaPredicted RBP2.6□□□□□ -1.99
SKP1-211ENST00000523359 TRAV10A0A0B4J240 114 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 CXorf51AA0A1B0GTR3 108 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 A0A1W2PNM2 257 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 SYS1-DBNDD2H3BUS1 97 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 PSCAO43653 123 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 NDUFC1O43677 76 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 ERC2-IT1O76042 136 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 HINT1P49773 126 aaPredicted RBP2.6□□□□□ -1.99
SKP1-211ENST00000523359 UBE2G1P62253 170 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 MIR22HGQ0VDD5 57 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 SPATA45Q537H7 98 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 PRR9Q5T870 116 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 LYPD5Q6UWN5 251 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 OR10AG1Q8NH19 301 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 Q8TAT8 98 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 TMEM254Q8TBM7 123 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 Q9BRP9 147 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 NMES1Q9C002 83 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 CDC42SE1Q9NRR8 79 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 COL11A1P12107 1806 aaPredicted RBP2.6□□□□□ -1.99
SKP1-211ENST00000523359 MAST4O15021 2626 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 PLXNA1Q9UIW2 1896 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 PRR14LQ5THK1 2151 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 RREB1Q92766 1687 aa2.6□□□□□ -1.99
SKP1-211ENST00000523359 DDX60Q8IY21 1712 aaKnown RBP2.59□□□□□ -1.99
SKP1-211ENST00000523359 TRBV10-3A0A0K0K1G6 114 aa2.59□□□□□ -1.99
SKP1-211ENST00000523359 TCRBV4S1A1TA0A5B7 111 aa2.59□□□□□ -1.99
SKP1-211ENST00000523359 ASAH2BP0C7U1 165 aa2.59□□□□□ -1.99
SKP1-211ENST00000523359 ETDBQ3ZM63 59 aa2.59□□□□□ -1.99
SKP1-211ENST00000523359 S100A7L2Q5SY68 101 aa2.59□□□□□ -1.99
SKP1-211ENST00000523359 SPINT4Q6UDR6 99 aa2.59□□□□□ -1.99
SKP1-211ENST00000523359 CMTM2Q8TAZ6 248 aa2.59□□□□□ -1.99
SKP1-211ENST00000523359 PRO2289Q9P1D8 64 aa2.59□□□□□ -1.99
SKP1-211ENST00000523359 CICQ96RK0 1608 aaPredicted RBP2.59□□□□□ -1.99
SKP1-211ENST00000523359 SETXQ7Z333 2677 aaKnown RBP2.59□□□□□ -2
SKP1-211ENST00000523359 NUMA1Q14980 2115 aa2.59□□□□□ -2
SKP1-211ENST00000523359 KIAA2026Q5HYC2 2103 aa2.59□□□□□ -2
SKP1-211ENST00000523359 SLIT2O94813 1529 aa2.58□□□□□ -2
SKP1-211ENST00000523359 PLCH1Q4KWH8 1693 aa2.58□□□□□ -2
SKP1-211ENST00000523359 ZNF462Q96JM2 2506 aa2.58□□□□□ -2
SKP1-211ENST00000523359 TRBV7-1A0A0A6YYK4 115 aa2.58□□□□□ -2
SKP1-211ENST00000523359 TRAV13-2A0A0B4J235 113 aa2.58□□□□□ -2
SKP1-211ENST00000523359 TRAV1-2A0A0B4J238 106 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms