RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 IFITM10A6NMD0 228 aa6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 GATCO43716 136 aaKnown RBP6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 CDK2AP2O75956 126 aa6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 IGHV3-30P01768 117 aa6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 IGHV3-33P01772 117 aa6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 SMIM17P0DL12 118 aa6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 IGHV3-30-3P0DP02 117 aa6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 IGHV3-30-5P0DP03 117 aa6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 RPS10P46783 165 aaKnown RBP6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 ZNF56Q15929 161 aa6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 WDR73Q6P4I2 378 aa6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 AP1S3Q96PC3 154 aa6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 KIF25-AS1Q9Y6Z4 181 aa6.99□□□□□ -1.29
TRAPPC9-209ENST00000521167 TRAV9-1A0A075B6T8 112 aa6.98□□□□□ -1.29
TRAPPC9-209ENST00000521167 TGIF2-C20orf24A0A0A6YYL0 155 aa6.98□□□□□ -1.29
TRAPPC9-209ENST00000521167 F5H697 171 aa6.98□□□□□ -1.29
TRAPPC9-209ENST00000521167 PPP1R2P9O14990 202 aa6.98□□□□□ -1.29
TRAPPC9-209ENST00000521167 GZMBP10144 247 aa6.98□□□□□ -1.29
TRAPPC9-209ENST00000521167 NEXN-AS1Q8NBZ9 246 aa6.98□□□□□ -1.29
TRAPPC9-209ENST00000521167 CHCHD7Q9BUK0 85 aa6.98□□□□□ -1.29
TRAPPC9-209ENST00000521167 TM2D2Q9BX73 214 aa6.98□□□□□ -1.29
TRAPPC9-209ENST00000521167 KRTAP4-9Q9BYQ8 210 aa6.98□□□□□ -1.29
TRAPPC9-209ENST00000521167 RPP21Q9H633 154 aaKnown RBP6.98□□□□□ -1.29
TRAPPC9-209ENST00000521167 TRAV8-3A0A0A6YYJ7 113 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 PSCAO43653 123 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 TRGC2P03986 189 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 S100PP25815 95 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 SSTP61278 116 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 TMEM97Q5BJF2 176 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 FAM231DQ6ZW35 169 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 NIT1Q86X76 327 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 HIST3H2BBQ8N257 126 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 TPPP3Q9BW30 176 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 OSTCQ9NRP0 149 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 URGCP-MRPS24S4R325 110 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 V9GYV3 84 aa6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 APOBP04114 4563 aaKnown RBP6.97□□□□□ -1.29
TRAPPC9-209ENST00000521167 H7C1H1 209 aa6.96□□□□□ -1.3
TRAPPC9-209ENST00000521167 TRGC1P0CF51 173 aa6.96□□□□□ -1.3
TRAPPC9-209ENST00000521167 LYZL1Q6UWQ5 148 aa6.96□□□□□ -1.3
TRAPPC9-209ENST00000521167 FRZBQ92765 325 aa6.96□□□□□ -1.3
TRAPPC9-209ENST00000521167 DNAJC30Q96LL9 226 aa6.96□□□□□ -1.3
TRAPPC9-209ENST00000521167 Q9HAA7 133 aa6.96□□□□□ -1.3
TRAPPC9-209ENST00000521167 TRBV6-8A0A0A6YYG3 113 aa6.95□□□□□ -1.3
TRAPPC9-209ENST00000521167 LRCOL1A6NCL2 159 aa6.95□□□□□ -1.3
TRAPPC9-209ENST00000521167 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
TRAPPC9-209ENST00000521167 NTF3P20783 257 aa6.95□□□□□ -1.3
TRAPPC9-209ENST00000521167 CTRLP40313 264 aa6.95□□□□□ -1.3
TRAPPC9-209ENST00000521167 PKIAP61925 76 aa6.95□□□□□ -1.3
TRAPPC9-209ENST00000521167 KCNIP4Q6PIL6 250 aa6.95□□□□□ -1.3
TRAPPC9-209ENST00000521167 DAZ4Q86SG3 579 aaKnown RBP6.95□□□□□ -1.3
TRAPPC9-209ENST00000521167 CNFNQ9BYD5 112 aa6.95□□□□□ -1.3
TRAPPC9-209ENST00000521167 DAZ3Q9NR90 486 aaKnown RBP6.95□□□□□ -1.3
TRAPPC9-209ENST00000521167 COX11Q9Y6N1 276 aa6.95□□□□□ -1.3
TRAPPC9-209ENST00000521167 HSPG2P98160 4391 aa6.95□□□□□ -1.3
TRAPPC9-209ENST00000521167 A0A087WX48 190 aa6.94□□□□□ -1.3
TRAPPC9-209ENST00000521167 M0QY20 66 aa6.94□□□□□ -1.3
TRAPPC9-209ENST00000521167 NTN5Q8WTR8 489 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC9-209ENST00000521167 GTSF1Q8WW33 167 aa6.94□□□□□ -1.3
TRAPPC9-209ENST00000521167 RMI2Q96E14 147 aa6.94□□□□□ -1.3
TRAPPC9-209ENST00000521167 DPH3P1Q9H4G8 78 aa6.94□□□□□ -1.3
TRAPPC9-209ENST00000521167 A8MWL6 223 aa6.93□□□□□ -1.3
TRAPPC9-209ENST00000521167 TMEM262E9PQX1 116 aa6.93□□□□□ -1.3
TRAPPC9-209ENST00000521167 MGPP08493 103 aa6.93□□□□□ -1.3
TRAPPC9-209ENST00000521167 S100A2P29034 98 aa6.93□□□□□ -1.3
TRAPPC9-209ENST00000521167 LINC00310P59036 64 aa6.93□□□□□ -1.3
TRAPPC9-209ENST00000521167 TWIST1Q15672 202 aa6.93□□□□□ -1.3
TRAPPC9-209ENST00000521167 PYY3Q5JQD4 70 aa6.93□□□□□ -1.3
TRAPPC9-209ENST00000521167 SUMO4Q6EEV6 95 aa6.93□□□□□ -1.3
TRAPPC9-209ENST00000521167 RASL11AQ6T310 242 aa6.93□□□□□ -1.3
TRAPPC9-209ENST00000521167 TSKUQ8WUA8 353 aa6.93□□□□□ -1.3
TRAPPC9-209ENST00000521167 PGLYRP4Q96LB8 373 aa6.93□□□□□ -1.3
TRAPPC9-209ENST00000521167 NIT2Q9NQR4 276 aa6.93□□□□□ -1.3
TRAPPC9-209ENST00000521167 FOXA3P55318 350 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC9-209ENST00000521167 NDUFA6P56556 154 aa6.92□□□□□ -1.3
TRAPPC9-209ENST00000521167 Q0VG73 95 aa6.92□□□□□ -1.3
TRAPPC9-209ENST00000521167 CT83Q5H943 113 aa6.92□□□□□ -1.3
TRAPPC9-209ENST00000521167 KLK12Q9UKR0 248 aa6.92□□□□□ -1.3
TRAPPC9-209ENST00000521167 TRBV25-1A0A075B6N4 114 aa6.91□□□□□ -1.3
TRAPPC9-209ENST00000521167 SMIM27A0A1W2PRY6 76 aa6.91□□□□□ -1.3
TRAPPC9-209ENST00000521167 HIGD1CA8MV81 97 aa6.91□□□□□ -1.3
TRAPPC9-209ENST00000521167 GCSHP23434 173 aa6.91□□□□□ -1.3
TRAPPC9-209ENST00000521167 NTM-AS1Q6ZSK4 140 aa6.91□□□□□ -1.3
TRAPPC9-209ENST00000521167 SMIM15Q7Z3B0 74 aa6.91□□□□□ -1.3
TRAPPC9-209ENST00000521167 Q8N814 137 aa6.91□□□□□ -1.3
TRAPPC9-209ENST00000521167 NUP35Q8NFH5 326 aa6.91□□□□□ -1.3
TRAPPC9-209ENST00000521167 PACRGQ96M98 296 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC9-209ENST00000521167 HIST1H2BLQ99880 126 aa6.91□□□□□ -1.3
TRAPPC9-209ENST00000521167 CHCHD5Q9BSY4 110 aa6.91□□□□□ -1.3
TRAPPC9-209ENST00000521167 NAT8BQ9UHF3 227 aa6.91□□□□□ -1.3
TRAPPC9-209ENST00000521167 DNAH8Q96JB1 4490 aa6.9□□□□□ -1.3
TRAPPC9-209ENST00000521167 ABCA13Q86UQ4 5058 aa6.9□□□□□ -1.3
TRAPPC9-209ENST00000521167 FAM231BA6NCW3 169 aa6.9□□□□□ -1.3
TRAPPC9-209ENST00000521167 PCP4L1A6NKN8 68 aa6.9□□□□□ -1.3
TRAPPC9-209ENST00000521167 ESDP10768 282 aa6.9□□□□□ -1.3
TRAPPC9-209ENST00000521167 IQCJQ1A5X6 159 aa6.9□□□□□ -1.3
TRAPPC9-209ENST00000521167 UBE2WQ96B02 151 aa6.9□□□□□ -1.3
TRAPPC9-209ENST00000521167 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
TRAPPC9-209ENST00000521167 IGKV2D-24A0A075B6R9 120 aa6.89□□□□□ -1.31
TRAPPC9-209ENST00000521167 IGLV5-52A0A0A0MRZ9 124 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms