RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 XKRY2A2RUG3 117 aa7.35□□□□□ -1.23
RNF4-216ENST00000511859 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
RNF4-216ENST00000511859 ODF1Q14990 250 aa7.35□□□□□ -1.23
RNF4-216ENST00000511859 LYZL1Q6UWQ5 148 aa7.35□□□□□ -1.23
RNF4-216ENST00000511859 RNF185Q96GF1 192 aa7.35□□□□□ -1.23
RNF4-216ENST00000511859 MUC2Q02817 5179 aa7.35□□□□□ -1.23
RNF4-216ENST00000511859 A8MWL6 223 aa7.34□□□□□ -1.23
RNF4-216ENST00000511859 A8MWV9 139 aa7.34□□□□□ -1.23
RNF4-216ENST00000511859 CXCL1P09341 107 aa7.34□□□□□ -1.23
RNF4-216ENST00000511859 IGLC6P0CF74 106 aa7.34□□□□□ -1.23
RNF4-216ENST00000511859 PNRC1Q12796 327 aaPredicted RBP7.34□□□□□ -1.23
RNF4-216ENST00000511859 SPANXN1Q5VSR9 72 aa7.34□□□□□ -1.23
RNF4-216ENST00000511859 GTSF1Q8WW33 167 aa7.34□□□□□ -1.23
RNF4-216ENST00000511859 PGLYRP4Q96LB8 373 aa7.34□□□□□ -1.23
RNF4-216ENST00000511859 LOC100996750A0A140TA64 210 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 SNAI2O43623 268 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 APOC3P02656 99 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 PIK3CD-AS1Q5SR53 167 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 C10orf91Q5T1B1 145 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 ENHOQ6UWT2 76 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 SAMD10Q9BYL1 202 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 KRTAP4-6Q9BYQ5 205 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 CARHSP1Q9Y2V2 147 aaKnown RBP7.33□□□□□ -1.24
RNF4-216ENST00000511859 A0A087WWL8 130 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 A0A087WYN8 130 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 HIGD1CA8MV81 97 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 CRPP02741 224 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 MT-ND4LP03901 98 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 OR5AL1P0C617 328 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 NDUFA5Q16718 116 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 CT83Q5H943 113 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 FAM74A4Q5TZK3 123 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 WDR73Q6P4I2 378 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 ZFP82Q8N141 532 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 CLRN3Q8NCR9 226 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 TSKUQ8WUA8 353 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 SSBP4Q9BWG4 385 aaPredicted RBP7.33□□□□□ -1.24
RNF4-216ENST00000511859 Q9UF83 564 aa7.33□□□□□ -1.24
RNF4-216ENST00000511859 CTRLP40313 264 aa7.32□□□□□ -1.24
RNF4-216ENST00000511859 SMCPP49901 116 aaPredicted RBP7.32□□□□□ -1.24
RNF4-216ENST00000511859 C7orf33Q8WU49 177 aa7.32□□□□□ -1.24
RNF4-216ENST00000511859 TMEM262E9PQX1 116 aa7.31□□□□□ -1.24
RNF4-216ENST00000511859 F2Z2F3 143 aa7.31□□□□□ -1.24
RNF4-216ENST00000511859 PHOX2AO14813 284 aa7.31□□□□□ -1.24
RNF4-216ENST00000511859 PPP1R2P9O14990 202 aa7.31□□□□□ -1.24
RNF4-216ENST00000511859 HLA-DQA1P01909 254 aa7.31□□□□□ -1.24
RNF4-216ENST00000511859 NTF3P20783 257 aa7.31□□□□□ -1.24
RNF4-216ENST00000511859 TWIST1Q15672 202 aa7.31□□□□□ -1.24
RNF4-216ENST00000511859 MIAQ16674 131 aa7.31□□□□□ -1.24
RNF4-216ENST00000511859 C14orf178Q8N769 122 aaPredicted RBP7.31□□□□□ -1.24
RNF4-216ENST00000511859 NUP35Q8NFH5 326 aa7.31□□□□□ -1.24
RNF4-216ENST00000511859 ANAPC16Q96DE5 110 aa7.31□□□□□ -1.24
RNF4-216ENST00000511859 RPS10P5Q9NQ39 176 aa7.31□□□□□ -1.24
RNF4-216ENST00000511859 A0A0U1RQV1 116 aa7.3□□□□□ -1.24
RNF4-216ENST00000511859 SMIM27A0A1W2PRY6 76 aa7.3□□□□□ -1.24
RNF4-216ENST00000511859 C7orf77A4D0Y5 90 aa7.3□□□□□ -1.24
RNF4-216ENST00000511859 CNBPP62633 177 aaKnown RBP7.3□□□□□ -1.24
RNF4-216ENST00000511859 CACNG7P62955 275 aa7.3□□□□□ -1.24
RNF4-216ENST00000511859 UFSP1Q6NVU6 142 aa7.3□□□□□ -1.24
RNF4-216ENST00000511859 REG3GQ6UW15 175 aa7.3□□□□□ -1.24
RNF4-216ENST00000511859 BORCS7Q96B45 105 aa7.3□□□□□ -1.24
RNF4-216ENST00000511859 GFRA4Q9GZZ7 299 aa7.3□□□□□ -1.24
RNF4-216ENST00000511859 NAT8BQ9UHF3 227 aa7.3□□□□□ -1.24
RNF4-216ENST00000511859 IGHV3-64A0A075B6Q5 118 aa7.29□□□□□ -1.24
RNF4-216ENST00000511859 MGPP08493 103 aa7.29□□□□□ -1.24
RNF4-216ENST00000511859 FOXA3P55318 350 aaPredicted RBP7.29□□□□□ -1.24
RNF4-216ENST00000511859 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
RNF4-216ENST00000511859 MRPL54Q6P161 138 aaKnown RBP7.29□□□□□ -1.24
RNF4-216ENST00000511859 SPINK6Q6UWN8 80 aa7.29□□□□□ -1.24
RNF4-216ENST00000511859 PLAC8Q9NZF1 115 aa7.29□□□□□ -1.24
RNF4-216ENST00000511859 KIF25-AS1Q9Y6Z4 181 aa7.29□□□□□ -1.24
RNF4-216ENST00000511859 A0A1B0GUT8 65 aa7.28□□□□□ -1.24
RNF4-216ENST00000511859 FAM231BA6NCW3 169 aa7.28□□□□□ -1.24
RNF4-216ENST00000511859 ANGP03950 147 aaKnown RBP7.28□□□□□ -1.24
RNF4-216ENST00000511859 ZNF56Q15929 161 aa7.28□□□□□ -1.24
RNF4-216ENST00000511859 SVBPQ8N300 66 aa7.28□□□□□ -1.24
RNF4-216ENST00000511859 SPACA4Q8TDM5 124 aa7.28□□□□□ -1.24
RNF4-216ENST00000511859 AP1S3Q96PC3 154 aa7.28□□□□□ -1.24
RNF4-216ENST00000511859 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.27□□□□□ -1.25
RNF4-216ENST00000511859 F5H697 171 aa7.27□□□□□ -1.25
RNF4-216ENST00000511859 RHODO00212 210 aa7.27□□□□□ -1.25
RNF4-216ENST00000511859 SNAPINO95295 136 aa7.27□□□□□ -1.25
RNF4-216ENST00000511859 SMIM17P0DL12 118 aa7.27□□□□□ -1.25
RNF4-216ENST00000511859 CAMPP49913 170 aa7.27□□□□□ -1.25
RNF4-216ENST00000511859 PKIAP61925 76 aa7.27□□□□□ -1.25
RNF4-216ENST00000511859 RHEBQ15382 184 aa7.27□□□□□ -1.25
RNF4-216ENST00000511859 CNFNQ9BYD5 112 aa7.27□□□□□ -1.25
RNF4-216ENST00000511859 FAT4Q6V0I7 4981 aa7.26□□□□□ -1.25
RNF4-216ENST00000511859 TRBV10-1A0A0K0K1A3 114 aa7.26□□□□□ -1.25
RNF4-216ENST00000511859 TRGC1P0CF51 173 aa7.26□□□□□ -1.25
RNF4-216ENST00000511859 PRR3P79522 188 aaKnown RBP7.26□□□□□ -1.25
RNF4-216ENST00000511859 RIGQ13278 110 aa7.26□□□□□ -1.25
RNF4-216ENST00000511859 CTDSP1Q9GZU7 261 aa7.26□□□□□ -1.25
RNF4-216ENST00000511859 TRBV7-3A0A075B6L6 115 aa7.25□□□□□ -1.25
RNF4-216ENST00000511859 TRBV6-8A0A0A6YYG3 113 aa7.25□□□□□ -1.25
RNF4-216ENST00000511859 CHTF8P0CG12 524 aa7.25□□□□□ -1.25
RNF4-216ENST00000511859 RPL36AP83881 106 aaKnown RBP7.25□□□□□ -1.25
RNF4-216ENST00000511859 MPV17L2Q567V2 206 aa7.25□□□□□ -1.25
RNF4-216ENST00000511859 KRTAP26-1Q6PEX3 210 aa7.25□□□□□ -1.25
RNF4-216ENST00000511859 SMIM15Q7Z3B0 74 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms