RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 Q8N8P6 123 aa1.35□□□□□ -2.19
ATXN3-208ENST00000504047 CCL4L1Q8NHW4 92 aa1.35□□□□□ -2.19
ATXN3-208ENST00000504047 ZCCHC13Q8WW36 166 aaKnown RBP1.35□□□□□ -2.19
ATXN3-208ENST00000504047 PATE1Q8WXA2 126 aa1.35□□□□□ -2.19
ATXN3-208ENST00000504047 DPH3Q96FX2 82 aa1.35□□□□□ -2.19
ATXN3-208ENST00000504047 CNFNQ9BYD5 112 aa1.35□□□□□ -2.19
ATXN3-208ENST00000504047 AGPAT4-IT1Q9H0P7 198 aa1.35□□□□□ -2.19
ATXN3-208ENST00000504047 MRPL35Q9NZE8 188 aaKnown RBP1.35□□□□□ -2.19
ATXN3-208ENST00000504047 TMEM14CQ9P0S9 112 aa1.35□□□□□ -2.19
ATXN3-208ENST00000504047 PRO1854Q9UHT4 67 aa1.35□□□□□ -2.19
ATXN3-208ENST00000504047 LINC00527Q9UJ94 153 aa1.35□□□□□ -2.19
ATXN3-208ENST00000504047 KLK5Q9Y337 293 aaPredicted RBP1.35□□□□□ -2.19
ATXN3-208ENST00000504047 EML6Q6ZMW3 1958 aa1.35□□□□□ -2.19
ATXN3-208ENST00000504047 C2orf16Q68DN1 1984 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 IGKV1D-37A0A075B6S9 117 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 SMIM26A0A096LP01 95 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 IGHV1-45A0A0A0MS14 117 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.34□□□□□ -2.19
ATXN3-208ENST00000504047 IGHV3-15A0A0B4J1V0 119 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 TRAV13-1A0A0B4J241 112 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 A0A0J9YW62 118 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 A0A0J9YY99 117 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 TRBV30A0A0K0K1B3 111 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 TEX49A0A1B0GTD5 131 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 A0A1W2PNN7 141 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 hADV29S1A0JD25 119 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 J3QQQ9 107 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 UPK2O00526 184 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 NDUFA3O95167 84 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 IGHV3-30P01768 117 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 IGHV3-30-5P0DP03 117 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 COX6A1P12074 109 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 LGALS3P17931 250 aaKnown RBP1.34□□□□□ -2.19
ATXN3-208ENST00000504047 PSMB8P28062 276 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 PFN2P35080 140 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 PLGLAQ15195 96 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.34□□□□□ -2.19
ATXN3-208ENST00000504047 SFTA2Q6UW10 78 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 C2orf82Q6UX34 121 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 GOLT1AQ6ZVE7 132 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 AAED1Q7RTV5 226 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 LINC00305Q7Z4B0 112 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 PRNTQ86SH4 94 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 RPS19BP1Q86WX3 136 aaKnown RBP1.34□□□□□ -2.19
ATXN3-208ENST00000504047 VKORC1L1Q8N0U8 176 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 ZCCHC24Q8N2G6 241 aaKnown RBP1.34□□□□□ -2.19
ATXN3-208ENST00000504047 SLC25A29Q8N8R3 303 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 C8orf31Q8N9H6 132 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 TMEM263Q8WUH6 116 aaKnown RBP1.34□□□□□ -2.19
ATXN3-208ENST00000504047 TOMM6Q96B49 74 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 PLEKHB2Q96CS7 222 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 FAM19A4Q96LR4 140 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 METTL26Q96S19 204 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 UPK3BQ9BT76 320 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 TMEM243Q9BU79 118 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 PROK2Q9HC23 129 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 V9GYY9 64 aa1.34□□□□□ -2.19
ATXN3-208ENST00000504047 GOLGB1Q14789 3259 aaKnown RBP1.34□□□□□ -2.2
ATXN3-208ENST00000504047 PTPRBP23467 1997 aa1.34□□□□□ -2.2
ATXN3-208ENST00000504047 CENPFP49454 3210 aa1.34□□□□□ -2.2
ATXN3-208ENST00000504047 LTBP2Q14767 1821 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 TRBV19A0A075B6N1 114 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 IGHV3-43A0A0B4J1X8 118 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 IGHV3OR16-9A0A0B4J2B5 98 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 A0A0J9YX75 114 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 C11orf86A6NJI1 115 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 LST1O00453 97 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 SH2D1AO60880 128 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 NDUFC2O95298 119 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 IGLV7-43P04211 117 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 CRIP1P50238 77 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 NPC2P61916 151 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 CCL8P80075 99 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 ERHP84090 104 aaKnown RBP1.33□□□□□ -2.2
ATXN3-208ENST00000504047 RPL18AQ02543 176 aaKnown RBP1.33□□□□□ -2.2
ATXN3-208ENST00000504047 PDE6HQ13956 83 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 RPL39P5Q59GN2 51 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 FAM201AQ5SY85 155 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 HES3Q5TGS1 186 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 LINC00336Q6ZUF6 198 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 SERP2Q8N6R1 65 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 FAM216BQ8N7L0 139 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 DAND5Q8N907 189 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 SMCR5Q8TEV8 140 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 DSCR8Q96T75 97 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 AMELXQ99217 191 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 SMIM2Q9BVW6 85 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 CYSTM1Q9H1C7 97 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 DYNLRB1Q9NP97 96 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 NDUFA4L2Q9NRX3 87 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 ICOSQ9Y6W8 199 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 SERP1Q9Y6X1 66 aa1.33□□□□□ -2.2
ATXN3-208ENST00000504047 GOLGA4Q13439 2230 aaKnown RBP1.33□□□□□ -2.2
ATXN3-208ENST00000504047 SPAG17Q6Q759 2223 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 TRAV12-2A0A075B6T6 113 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 TRBV7-1A0A0A6YYK4 115 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 TRAV41A0A0B4J266 112 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 SPTY2D1-AS1A0A0U1RR47 76 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 FAM236DA0A1B0GTK5 79 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 SDHAF1A6NFY7 115 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms