RNA–Protein interactions for RNA: ENST00000499125.3

HMGN1P12-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 12, humanhuman

BASIC

Gene HMGN1P12, Length 195 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P12-201ENST00000499125 ZNF815PA8K554 130 aa-0.04□□□□□ -2.42
HMGN1P12-201ENST00000499125 SMIM6P0DI80 62 aa-0.04□□□□□ -2.42
HMGN1P12-201ENST00000499125 SSBP3-AS1Q7Z2R9 100 aa-0.04□□□□□ -2.42
HMGN1P12-201ENST00000499125 SEC11CQ9BY50 192 aa-0.04□□□□□ -2.42
HMGN1P12-201ENST00000499125 CNFNQ9BYD5 112 aa-0.04□□□□□ -2.42
HMGN1P12-201ENST00000499125 LINC00312Q9Y6C7 94 aa-0.04□□□□□ -2.42
HMGN1P12-201ENST00000499125 HERC1Q15751 4861 aa-0.04□□□□□ -2.42
HMGN1P12-201ENST00000499125 NSD1Q96L73 2696 aaPredicted RBP-0.04□□□□□ -2.42
HMGN1P12-201ENST00000499125 HECTD4Q9Y4D8 3996 aa-0.04□□□□□ -2.42
HMGN1P12-201ENST00000499125 FLNCQ14315 2725 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 BICRAQ9NZM4 1560 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 A0A0D9SFI3 127 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 SPAARA0A1B0GVQ0 90 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 SIX6O95475 246 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 SPINK8P0C7L1 97 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 CCL18P55774 89 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 ARPC4P59998 168 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 COPS9Q8WXC6 57 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 PDCD10Q9BUL8 212 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 CYP4F30PQ9H0H9 118 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 IFT172Q9UG01 1749 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 ZNF609O15014 1411 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 PI4KAP42356 2102 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 BIVM-ERCC5R4GMW8 1640 aa-0.05□□□□□ -2.42
HMGN1P12-201ENST00000499125 VPS13DQ5THJ4 4388 aa-0.06□□□□□ -2.42
HMGN1P12-201ENST00000499125 NWD2Q9ULI1 1742 aa-0.06□□□□□ -2.42
HMGN1P12-201ENST00000499125 DNAH9Q9NYC9 4486 aa-0.06□□□□□ -2.42
HMGN1P12-201ENST00000499125 PIGBOS1A0A0B4J2F0 54 aa-0.06□□□□□ -2.42
HMGN1P12-201ENST00000499125 IFITM1P13164 125 aa-0.06□□□□□ -2.42
HMGN1P12-201ENST00000499125 CFAP126Q5VTH2 177 aa-0.06□□□□□ -2.42
HMGN1P12-201ENST00000499125 C12orf73Q69YU5 71 aa-0.06□□□□□ -2.42
HMGN1P12-201ENST00000499125 SNRNP25Q9BV90 132 aaKnown RBP-0.06□□□□□ -2.42
HMGN1P12-201ENST00000499125 PRO0255Q9UI72 69 aa-0.06□□□□□ -2.42
HMGN1P12-201ENST00000499125 CFTRP13569 1480 aa-0.06□□□□□ -2.42
HMGN1P12-201ENST00000499125 DNAH6Q9C0G6 4158 aa-0.06□□□□□ -2.42
HMGN1P12-201ENST00000499125 FAT3Q8TDW7 4589 aa-0.06□□□□□ -2.42
HMGN1P12-201ENST00000499125 ZNF292O60281 2723 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 CHD9Q3L8U1 2897 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 GVINP1Q7Z2Y8 2422 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 MRC1P22897 1456 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 SPEF2Q9C093 1822 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 TRAV13-2A0A0B4J235 113 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 HCG22E2RYF7 251 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 HIST1H1DP16402 221 aaKnown RBP-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 SELENOWP63302 87 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 S100A12P80511 92 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 Q6AWC8 147 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 ARL11Q969Q4 196 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 AQP10Q96PS8 301 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 AGPAT4-IT1Q9H0P7 198 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 RERGLQ9H628 205 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 SERP1Q9Y6X1 66 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 R4GMQ9 66 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 FLGP20930 4061 aaPredicted RBP-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 APOBP04114 4563 aaKnown RBP-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 STARD9Q9P2P6 4700 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 MUC17Q685J3 4493 aa-0.07□□□□□ -2.42
HMGN1P12-201ENST00000499125 PCLOQ9Y6V0 5065 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 USH2AO75445 5202 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 UBR4Q5T4S7 5183 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 C10orf142B7Z368 130 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 NDUFA2O43678 99 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 PPP1R17O96001 155 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 SPRR2DP22532 72 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 CCDC58Q4VC31 144 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 C10orf128Q5T292 105 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 Q8N8P6 123 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 SMIM4Q8WVI0 70 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 LSM10Q969L4 123 aaKnown RBP-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 LINC00470Q9BZP3 86 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 SCN3BQ9NY72 215 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 LENEPQ9Y5L5 61 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 PRDM2Q13029 1718 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 DNAH11Q96DT5 4516 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 EPPK1P58107 5090 aaKnown RBP-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 MYH9P35579 1960 aaKnown RBP-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 CHD6Q8TD26 2715 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 COL6A3P12111 3177 aa-0.08□□□□□ -2.42
HMGN1P12-201ENST00000499125 GOLGA4Q13439 2230 aaKnown RBP-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 LAMC1P11047 1609 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 NHSL1Q5SYE7 1610 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 BCL9LQ86UU0 1499 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 RNF213Q63HN8 5207 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 RYR1P21817 5038 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 ZFHX3Q15911 3703 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 STAB1Q9NY15 2570 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 DNAH2Q9P225 4427 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 SPTA1P02549 2419 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 PPIP5K1Q6PFW1 1433 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 TRAV22A0A0B4J277 110 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 M0R135 149 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 M0R3E3 92 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 CFDP00746 253 aaPredicted RBP-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 BTG2P78543 158 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 RBM3P98179 157 aaKnown RBP-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 WFDC2Q14508 124 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 KRTAP6-1Q3LI64 71 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 NAA60Q9H7X0 242 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 NPVFQ9HCQ7 196 aa-0.09□□□□□ -2.42
HMGN1P12-201ENST00000499125 ANK3Q12955 4377 aaKnown RBP-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms