RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PXDNQ92626 1479 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 ADAMTS12P58397 1594 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 THOC2Q8NI27 1593 aaKnown RBP1.66□□□□□ -2.14
VPS36-206ENST00000497149 UNC13CQ8NB66 2214 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 TNS1Q9HBL0 1735 aaKnown RBP1.66□□□□□ -2.14
VPS36-206ENST00000497149 ABCC1P33527 1531 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 ABCA10Q8WWZ4 1543 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 UGGT2Q9NYU1 1516 aa1.66□□□□□ -2.14
VPS36-206ENST00000497149 ARFGEF3Q5TH69 2177 aa1.65□□□□□ -2.14
VPS36-206ENST00000497149 CDK12Q9NYV4 1490 aaPredicted RBP1.65□□□□□ -2.15
VPS36-206ENST00000497149 TRAV12-3A0A0B4J271 114 aa1.65□□□□□ -2.15
VPS36-206ENST00000497149 TRBV10-1A0A0K0K1A3 114 aa1.65□□□□□ -2.15
VPS36-206ENST00000497149 EDDM3BP56851 147 aa1.65□□□□□ -2.15
VPS36-206ENST00000497149 PDE6HQ13956 83 aa1.65□□□□□ -2.15
VPS36-206ENST00000497149 CFAP126Q5VTH2 177 aa1.65□□□□□ -2.15
VPS36-206ENST00000497149 ZNF833PQ6ZTB9 187 aa1.65□□□□□ -2.15
VPS36-206ENST00000497149 SMIM5Q71RC9 77 aa1.65□□□□□ -2.15
VPS36-206ENST00000497149 Q8TAT8 98 aa1.65□□□□□ -2.15
VPS36-206ENST00000497149 IFI27L1Q96BM0 104 aa1.65□□□□□ -2.15
VPS36-206ENST00000497149 ORMDL1Q9P0S3 153 aa1.65□□□□□ -2.15
VPS36-206ENST00000497149 PATJQ8NI35 1801 aa1.65□□□□□ -2.15
VPS36-206ENST00000497149 CC2D2AQ9P2K1 1620 aa1.65□□□□□ -2.15
VPS36-206ENST00000497149 EPRSP07814 1512 aaKnown RBP1.65□□□□□ -2.15
VPS36-206ENST00000497149 MLH3Q9UHC1 1453 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 FREM1Q5H8C1 2179 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 ALPK2Q86TB3 2170 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 MED12Q93074 2177 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 LRRIQ1Q96JM4 1722 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 A0A0G2JND7 137 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 TMEM14DPA8MWL7 114 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 CHKB-CPT1BH3BT56 60 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 H7BZZ5 65 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 ELOBQ15370 118 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 ZNF56Q15929 161 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 KRTAP26-1Q6PEX3 210 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 Q8N6K4 173 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 C9orf163Q8N9P6 203 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 DMAC1Q96GE9 116 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 ZNF625Q96I27 306 aaPredicted RBP1.64□□□□□ -2.15
VPS36-206ENST00000497149 ODF3Q96PU9 254 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 MRPL36Q9P0J6 103 aaKnown RBP1.64□□□□□ -2.15
VPS36-206ENST00000497149 PTPN23Q9H3S7 1636 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 KCPQ6ZWJ8 1503 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 STRCQ7RTU9 1775 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 USP54Q70EL1 1684 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 LAMC3Q9Y6N6 1575 aa1.64□□□□□ -2.15
VPS36-206ENST00000497149 WDR90Q96KV7 1748 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.63□□□□□ -2.15
VPS36-206ENST00000497149 LTN1O94822 1766 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 ABCC2Q92887 1545 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 TRBV25-1A0A075B6N4 114 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 TRAV22A0A0B4J277 110 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 A0A0J9YY99 117 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 C2orf70A6NJV1 201 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 ZNF815PA8K554 130 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 PRB4P10163 310 aaPredicted RBP1.63□□□□□ -2.15
VPS36-206ENST00000497149 ELOF1P60002 83 aaKnown RBP1.63□□□□□ -2.15
VPS36-206ENST00000497149 UBE2D3P61077 147 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 UBE2D2P62837 147 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 C1orf137Q5JT78 98 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 VMO1Q7Z5L0 202 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 V9GYH0 126 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 COL4A1P02462 1669 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 DOCK2Q92608 1830 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 MYO7BQ6PIF6 2116 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 IQSEC2Q5JU85 1478 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 NRXN1Q9ULB1 1477 aa1.63□□□□□ -2.15
VPS36-206ENST00000497149 CR1P17927 2039 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 TMEM131LA2VDJ0 1609 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 KIF14Q15058 1648 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 LAMB2P55268 1798 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 MAGI3Q5TCQ9 1506 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.62□□□□□ -2.15
VPS36-206ENST00000497149 KIAA1549LQ6ZVL6 1849 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 PCDH15Q96QU1 1955 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 A0A1B0GWA3 101 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 HIGD1CA8MV81 97 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 IGHV3-30P01768 117 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 HMGN2P05204 90 aaKnown RBP1.62□□□□□ -2.15
VPS36-206ENST00000497149 IGHV3-30-5P0DP03 117 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 KRTAP21-3Q3LHN1 58 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 DEFB121Q5J5C9 76 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 XAF1Q6GPH4 301 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 C6orf201Q7Z4U5 140 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 PPP1R1CQ8WVI7 109 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 UNC13BO14795 1591 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 DOCK10Q96BY6 2186 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 CCDC180Q9P1Z9 1646 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 RGPD8O14715 1765 aaPredicted RBP1.62□□□□□ -2.15
VPS36-206ENST00000497149 LAMB1P07942 1786 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 RGPD5Q99666 1765 aa1.62□□□□□ -2.15
VPS36-206ENST00000497149 ABCA4P78363 2273 aa1.61□□□□□ -2.15
VPS36-206ENST00000497149 TOPAZ1Q8N9V7 1692 aa1.61□□□□□ -2.15
VPS36-206ENST00000497149 OTOGLQ3ZCN5 2332 aa1.61□□□□□ -2.15
VPS36-206ENST00000497149 COL24A1Q17RW2 1714 aa1.61□□□□□ -2.15
VPS36-206ENST00000497149 KNDC1Q76NI1 1749 aa1.61□□□□□ -2.15
VPS36-206ENST00000497149 MON2Q7Z3U7 1717 aa1.61□□□□□ -2.15
VPS36-206ENST00000497149 INO80Q9ULG1 1556 aaPredicted RBP1.61□□□□□ -2.15
VPS36-206ENST00000497149 SFTA3P0C7M3 94 aa1.61□□□□□ -2.15
VPS36-206ENST00000497149 SAA2P0DJI9 122 aaPredicted RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms