RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ZNF14P17017 642 aaPredicted RBP2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 MDKP21741 143 aaPredicted RBP2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 FUSP35637 526 aaKnown RBP eCLIP2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 GNG4P50150 75 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 MYL5Q02045 173 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 RELAQ04206 551 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 KLRD1Q13241 179 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 NCMAPQ5T1S8 102 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 DPPA3Q6W0C5 159 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 Q6ZQT0 140 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 Q8IYB0 196 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 FAM216BQ8N7L0 139 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 OR4B1Q8NGF8 309 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 CIB3Q96Q77 187 aaPredicted RBP2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 OR8B2Q96RD0 313 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 CCL19Q99731 98 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 KRTAP2-4Q9BYR9 128 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 LSM2Q9Y333 95 aaKnown RBP2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 NACAE9PAV3 2078 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 CPAMD8Q8IZJ3 1885 aa2.16□□□□□ -2.06
EXOSC3-208ENST00000496910 SCN3AQ9NY46 2000 aa2.15□□□□□ -2.06
EXOSC3-208ENST00000496910 TRBV10-2A0A0K0K1G8 114 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 PVALEFA0A1B0GWK0 134 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 IFITM5A6NNB3 132 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 BBIP1A8MTZ0 92 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 SDCBPO00560 298 aaPredicted RBP2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 CDC42EP2O14613 210 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 OR1I1O60431 355 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 PITX3O75364 302 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 ZNF737O75373 536 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 CD3DP04234 171 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 CD14P08571 375 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 ZNF705BP0CI00 300 aaPredicted RBP2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 COX6A1P12074 109 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 NFYAP23511 347 aaPredicted RBP2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 ZNF93P35789 620 aaPredicted RBP2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 KRTAP12-2P59991 146 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 CLLU1Q5K131 121 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 TMEM136Q6ZRR5 245 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 AAED1Q7RTV5 226 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 ACBD7Q8N6N7 88 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 CCL4L1Q8NHW4 92 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 CHCHD1Q96BP2 118 aaKnown RBP2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 MCEEQ96PE7 176 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 ANAPC11Q9NYG5 84 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 CCDC167Q9P0B6 97 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 TIMM9Q9Y5J7 89 aa2.15□□□□□ -2.07
EXOSC3-208ENST00000496910 DNAH5Q8TE73 4624 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 TNCP24821 2201 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 CCDC88CQ9P219 2028 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 TRAV30A0A087WSZ9 112 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 TRAV3A0A0B4J244 114 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 TMEM218A2RU14 115 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 M0R143 59 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 SYNGR2O43760 224 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 IFNA17P01571 189 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 IGLV1-51P01701 117 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 PYYP10082 97 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 SLC25A4P12235 298 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 KRTAP5-9P26371 169 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 FXYD2P54710 66 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 PKIAP61925 76 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 BLCAPP62952 87 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 NNATQ16517 81 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 KRTAP11-1Q8IUC1 163 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 C8orf59Q8N0T1 100 aaPredicted RBP2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 Q8N2B8 174 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 RETNLBQ9BQ08 111 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 MRPL57Q9BQC6 102 aaKnown RBP2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 SNRNP25Q9BV90 132 aaKnown RBP2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 SLC35B3Q9H1N7 401 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 MPC1Q9Y5U8 109 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 USH2AO75445 5202 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 EXPH5Q8NEV8 1989 aa2.14□□□□□ -2.07
EXOSC3-208ENST00000496910 IGKV1D-42A0A075B6H8 117 aa2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 IGLV3-12A0A075B6K2 115 aa2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 IGHV1-18A0A0C4DH31 117 aa2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 FNDC10F2Z333 226 aa2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 CD2P06729 351 aa2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 CTSDP07339 412 aaPredicted RBP2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 TPT1P13693 172 aaKnown RBP2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 FABP4P15090 132 aa2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 BTG2P78543 158 aa2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 MRPS36P82909 103 aaKnown RBP2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 SS18Q15532 418 aa2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 POP5Q969H6 163 aaKnown RBP2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 HHLA3Q9XRX5 114 aa2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 R4GN34 69 aa2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 MUC12Q9UKN1 5478 aa2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
EXOSC3-208ENST00000496910 DNAH17Q9UFH2 4485 aa2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 TRBV20-1A0A075B6N2 111 aa2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 IGKV2D-26A0A0A0MRZ7 120 aa2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 RPL36A-HNRNPH2H7BZ11 118 aa2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 HIST1H1BP16401 226 aaKnown RBP2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 HIST1H1DP16402 221 aaKnown RBP2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 CDK6Q00534 326 aa2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 HSD52Q0P140 79 aa2.12□□□□□ -2.07
EXOSC3-208ENST00000496910 SLC35E3Q7Z769 313 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms