RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 LINC00587B1AMM8 73 aa6.1□□□□□ -1.43
U2AF1-212ENST00000496462 ATP5LO75964 103 aa6.1□□□□□ -1.43
U2AF1-212ENST00000496462 TIRAPP58753 221 aa6.1□□□□□ -1.43
U2AF1-212ENST00000496462 JPT2Q9H910 190 aa6.1□□□□□ -1.43
U2AF1-212ENST00000496462 MSRB1Q9NZV6 116 aa6.1□□□□□ -1.43
U2AF1-212ENST00000496462 IGHV3-38A0A0C4DH36 116 aa6.1□□□□□ -1.43
U2AF1-212ENST00000496462 ANGP03950 147 aaKnown RBP6.1□□□□□ -1.43
U2AF1-212ENST00000496462 LAGE3Q14657 143 aa6.1□□□□□ -1.43
U2AF1-212ENST00000496462 VSIG2Q96IQ7 327 aa6.1□□□□□ -1.43
U2AF1-212ENST00000496462 SMIM2Q9BVW6 85 aa6.1□□□□□ -1.43
U2AF1-212ENST00000496462 C1orf43Q9BWL3 253 aa6.1□□□□□ -1.43
U2AF1-212ENST00000496462 GAGE6Q13070 117 aa6.1□□□□□ -1.43
U2AF1-212ENST00000496462 TGIF2-C20orf24A0A0A6YYL0 155 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 VCX2Q9H322 139 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 GEMIN7Q9H840 131 aaKnown RBP6.09□□□□□ -1.43
U2AF1-212ENST00000496462 HSPB8Q9UJY1 196 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 IGKV3OR2-268A0A0C4DH90 116 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 PRSS1P07477 247 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 ZNF25P17030 456 aaPredicted RBP6.09□□□□□ -1.43
U2AF1-212ENST00000496462 KIAA1644Q3SXP7 199 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 CBLN2Q8IUK8 224 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 Q8N8P6 123 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 MRPS16Q9Y3D3 137 aaKnown RBP6.09□□□□□ -1.43
U2AF1-212ENST00000496462 APOMO95445 188 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 ADCYAP1P18509 176 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 ODF1Q14990 250 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 Q6ZQT7 251 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 PACRGQ96M98 296 aaPredicted RBP6.09□□□□□ -1.43
U2AF1-212ENST00000496462 SCGB3A1Q96QR1 104 aa6.09□□□□□ -1.43
U2AF1-212ENST00000496462 C14orf177Q52M58 125 aa6.08□□□□□ -1.44
U2AF1-212ENST00000496462 LGALS9CQ6DKI2 356 aa6.08□□□□□ -1.44
U2AF1-212ENST00000496462 NEXN-AS1Q8NBZ9 246 aa6.08□□□□□ -1.44
U2AF1-212ENST00000496462 TRBV6-5A0A0K0K1A5 114 aa6.08□□□□□ -1.44
U2AF1-212ENST00000496462 M0QY20 66 aa6.08□□□□□ -1.44
U2AF1-212ENST00000496462 MALP21145 153 aa6.08□□□□□ -1.44
U2AF1-212ENST00000496462 ALKBH7Q9BT30 221 aaPredicted RBP6.08□□□□□ -1.44
U2AF1-212ENST00000496462 TRBV6-8A0A0A6YYG3 113 aa6.08□□□□□ -1.44
U2AF1-212ENST00000496462 TRAV26-2A0A0B4J265 109 aa6.08□□□□□ -1.44
U2AF1-212ENST00000496462 UBE2WQ96B02 151 aa6.08□□□□□ -1.44
U2AF1-212ENST00000496462 TMEM70Q9BUB7 260 aa6.08□□□□□ -1.44
U2AF1-212ENST00000496462 SPANXA1Q9NS26 97 aa6.08□□□□□ -1.44
U2AF1-212ENST00000496462 IGHV3-30P01768 117 aa6.07□□□□□ -1.44
U2AF1-212ENST00000496462 IGHV3-33P01772 117 aa6.07□□□□□ -1.44
U2AF1-212ENST00000496462 IGHV3-30-3P0DP02 117 aa6.07□□□□□ -1.44
U2AF1-212ENST00000496462 IGHV3-30-5P0DP03 117 aa6.07□□□□□ -1.44
U2AF1-212ENST00000496462 UBE2D3P61077 147 aa6.07□□□□□ -1.44
U2AF1-212ENST00000496462 UBE2D2P62837 147 aa6.07□□□□□ -1.44
U2AF1-212ENST00000496462 SMKR1H3BMG3 65 aa6.07□□□□□ -1.44
U2AF1-212ENST00000496462 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.07□□□□□ -1.44
U2AF1-212ENST00000496462 H3BRM9 83 aa6.07□□□□□ -1.44
U2AF1-212ENST00000496462 GATD1Q8NB37 220 aa6.07□□□□□ -1.44
U2AF1-212ENST00000496462 CHCHD1Q96BP2 118 aaKnown RBP6.07□□□□□ -1.44
U2AF1-212ENST00000496462 IGKV2D-24A0A075B6R9 120 aa6.07□□□□□ -1.44
U2AF1-212ENST00000496462 CCL25O15444 150 aa6.07□□□□□ -1.44
U2AF1-212ENST00000496462 RPL32P62910 135 aaKnown RBP6.07□□□□□ -1.44
U2AF1-212ENST00000496462 TEX43Q6ZNM6 134 aa6.07□□□□□ -1.44
U2AF1-212ENST00000496462 PLAC8L1A1L4L8 177 aa6.06□□□□□ -1.44
U2AF1-212ENST00000496462 HSBP1L1C9JCN9 74 aa6.06□□□□□ -1.44
U2AF1-212ENST00000496462 GCSHP23434 173 aa6.06□□□□□ -1.44
U2AF1-212ENST00000496462 HERVK_113P61574 105 aa6.06□□□□□ -1.44
U2AF1-212ENST00000496462 Q9H8V8 135 aa6.06□□□□□ -1.44
U2AF1-212ENST00000496462 CASC10Q5T4H9 136 aa6.06□□□□□ -1.44
U2AF1-212ENST00000496462 A0A1B0GXF2 115 aa6.06□□□□□ -1.44
U2AF1-212ENST00000496462 IFITM10A6NMD0 228 aa6.06□□□□□ -1.44
U2AF1-212ENST00000496462 HBDP02042 147 aa6.06□□□□□ -1.44
U2AF1-212ENST00000496462 LINC00614P0C842 121 aa6.06□□□□□ -1.44
U2AF1-212ENST00000496462 LYPD5Q6UWN5 251 aa6.06□□□□□ -1.44
U2AF1-212ENST00000496462 TMEM141Q96I45 108 aa6.06□□□□□ -1.44
U2AF1-212ENST00000496462 PRSS2P07478 247 aa6.05□□□□□ -1.44
U2AF1-212ENST00000496462 HOXA5P20719 270 aa6.05□□□□□ -1.44
U2AF1-212ENST00000496462 C12orf57Q99622 126 aa6.05□□□□□ -1.44
U2AF1-212ENST00000496462 Q9HAA7 133 aa6.05□□□□□ -1.44
U2AF1-212ENST00000496462 RPL39LQ96EH5 51 aaKnown RBP6.05□□□□□ -1.44
U2AF1-212ENST00000496462 NPYP01303 97 aa6.05□□□□□ -1.44
U2AF1-212ENST00000496462 C1orf134Q5TEV5 83 aa6.05□□□□□ -1.44
U2AF1-212ENST00000496462 MAP1LC3CQ9BXW4 147 aa6.05□□□□□ -1.44
U2AF1-212ENST00000496462 COL7A1Q02388 2944 aa6.05□□□□□ -1.44
U2AF1-212ENST00000496462 TRGC2P03986 189 aa6.04□□□□□ -1.44
U2AF1-212ENST00000496462 KLK12Q9UKR0 248 aa6.04□□□□□ -1.44
U2AF1-212ENST00000496462 IGLV2-18A0A075B6J9 118 aa6.04□□□□□ -1.44
U2AF1-212ENST00000496462 TRAV8-4A0A0B4J246 113 aa6.04□□□□□ -1.44
U2AF1-212ENST00000496462 IQCJQ1A5X6 159 aa6.04□□□□□ -1.44
U2AF1-212ENST00000496462 MIAQ16674 131 aa6.04□□□□□ -1.44
U2AF1-212ENST00000496462 APLNQ9ULZ1 77 aa6.04□□□□□ -1.44
U2AF1-212ENST00000496462 LOC100131303A0A0U1RQF7 123 aa6.03□□□□□ -1.44
U2AF1-212ENST00000496462 LEPROTL1O95214 131 aa6.03□□□□□ -1.44
U2AF1-212ENST00000496462 FGF6P10767 208 aa6.03□□□□□ -1.44
U2AF1-212ENST00000496462 C2orf66Q6UXQ4 117 aa6.03□□□□□ -1.44
U2AF1-212ENST00000496462 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.02□□□□□ -1.45
U2AF1-212ENST00000496462 TRBV27A0A0K0K1C4 114 aa6.02□□□□□ -1.45
U2AF1-212ENST00000496462 DPH3Q96FX2 82 aa6.02□□□□□ -1.45
U2AF1-212ENST00000496462 TENM2Q9NT68 2774 aa6.02□□□□□ -1.45
U2AF1-212ENST00000496462 H0Y8G0 127 aa6.02□□□□□ -1.45
U2AF1-212ENST00000496462 M0R2N4 97 aa6.02□□□□□ -1.45
U2AF1-212ENST00000496462 ESRGQ1W209 222 aa6.02□□□□□ -1.45
U2AF1-212ENST00000496462 ZNF561-AS1K7EIQ3 104 aa6.01□□□□□ -1.45
U2AF1-212ENST00000496462 FABP4P15090 132 aa6.01□□□□□ -1.45
U2AF1-212ENST00000496462 LINC01556Q5JQF7 62 aa6.01□□□□□ -1.45
U2AF1-212ENST00000496462 NIT1Q86X76 327 aa6.01□□□□□ -1.45
U2AF1-212ENST00000496462 KIF25-AS1Q9Y6Z4 181 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms