RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 CTRLP40313 264 aa6.34□□□□□ -1.39
TRUB1-202ENST00000485065 RPS20P60866 119 aaKnown RBP6.34□□□□□ -1.39
TRUB1-202ENST00000485065 LINC01620Q4KN68 170 aa6.34□□□□□ -1.39
TRUB1-202ENST00000485065 Q8N976 141 aa6.34□□□□□ -1.39
TRUB1-202ENST00000485065 GTSF1Q8WW33 167 aa6.34□□□□□ -1.39
TRUB1-202ENST00000485065 UBE2WQ96B02 151 aa6.34□□□□□ -1.39
TRUB1-202ENST00000485065 TPPP3Q9BW30 176 aa6.34□□□□□ -1.39
TRUB1-202ENST00000485065 CNFNQ9BYD5 112 aa6.34□□□□□ -1.39
TRUB1-202ENST00000485065 RNASE7Q9H1E1 156 aaKnown RBP6.34□□□□□ -1.39
TRUB1-202ENST00000485065 A0A087WX48 190 aa6.33□□□□□ -1.4
TRUB1-202ENST00000485065 F2Z2F3 143 aa6.33□□□□□ -1.4
TRUB1-202ENST00000485065 IFNA1P01562 189 aa6.33□□□□□ -1.4
TRUB1-202ENST00000485065 P01737 135 aa6.33□□□□□ -1.4
TRUB1-202ENST00000485065 NKX2-5P52952 324 aaPredicted RBP6.33□□□□□ -1.4
TRUB1-202ENST00000485065 FOXA3P55318 350 aaPredicted RBP6.33□□□□□ -1.4
TRUB1-202ENST00000485065 CACNG7P62955 275 aa6.33□□□□□ -1.4
TRUB1-202ENST00000485065 TOR2AQ5JU69 321 aa6.33□□□□□ -1.4
TRUB1-202ENST00000485065 WDR73Q6P4I2 378 aa6.33□□□□□ -1.4
TRUB1-202ENST00000485065 AP1S3Q96PC3 154 aa6.33□□□□□ -1.4
TRUB1-202ENST00000485065 PRR34Q9NV39 138 aa6.33□□□□□ -1.4
TRUB1-202ENST00000485065 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.32□□□□□ -1.4
TRUB1-202ENST00000485065 IGKV2D-24A0A075B6R9 120 aa6.32□□□□□ -1.4
TRUB1-202ENST00000485065 TMEM262E9PQX1 116 aa6.32□□□□□ -1.4
TRUB1-202ENST00000485065 RBX1P62877 108 aa6.32□□□□□ -1.4
TRUB1-202ENST00000485065 IQCJQ1A5X6 159 aa6.32□□□□□ -1.4
TRUB1-202ENST00000485065 C15orf54Q8N8G6 183 aa6.32□□□□□ -1.4
TRUB1-202ENST00000485065 COX11Q9Y6N1 276 aa6.32□□□□□ -1.4
TRUB1-202ENST00000485065 URGCP-MRPS24S4R325 110 aa6.32□□□□□ -1.4
TRUB1-202ENST00000485065 TMEM250H0YL14 139 aa6.31□□□□□ -1.4
TRUB1-202ENST00000485065 SMIM17P0DL12 118 aa6.31□□□□□ -1.4
TRUB1-202ENST00000485065 TAGLN2P37802 199 aaKnown RBP6.31□□□□□ -1.4
TRUB1-202ENST00000485065 GAGE6Q13070 117 aa6.31□□□□□ -1.4
TRUB1-202ENST00000485065 ELOBQ15370 118 aa6.31□□□□□ -1.4
TRUB1-202ENST00000485065 CHCHD5Q9BSY4 110 aa6.31□□□□□ -1.4
TRUB1-202ENST00000485065 GFRA4Q9GZZ7 299 aa6.31□□□□□ -1.4
TRUB1-202ENST00000485065 RPP21Q9H633 154 aaKnown RBP6.31□□□□□ -1.4
TRUB1-202ENST00000485065 MGPP08493 103 aa6.3□□□□□ -1.4
TRUB1-202ENST00000485065 BLOC1S1P78537 153 aa6.3□□□□□ -1.4
TRUB1-202ENST00000485065 Q0VG73 95 aa6.3□□□□□ -1.4
TRUB1-202ENST00000485065 RASL11AQ6T310 242 aa6.3□□□□□ -1.4
TRUB1-202ENST00000485065 LINC00269Q8N2A0 174 aa6.3□□□□□ -1.4
TRUB1-202ENST00000485065 GATD1Q8NB37 220 aa6.3□□□□□ -1.4
TRUB1-202ENST00000485065 C20orf203Q8NBC4 194 aa6.3□□□□□ -1.4
TRUB1-202ENST00000485065 DPH3P1Q9H4G8 78 aa6.3□□□□□ -1.4
TRUB1-202ENST00000485065 NIT2Q9NQR4 276 aa6.3□□□□□ -1.4
TRUB1-202ENST00000485065 BIN3Q9NQY0 253 aa6.3□□□□□ -1.4
TRUB1-202ENST00000485065 IGLV4-60A0A075B6I1 120 aa6.29□□□□□ -1.4
TRUB1-202ENST00000485065 TRAV26-2A0A0B4J265 109 aa6.29□□□□□ -1.4
TRUB1-202ENST00000485065 XKRY2A2RUG3 117 aa6.29□□□□□ -1.4
TRUB1-202ENST00000485065 C9JQL5 133 aa6.29□□□□□ -1.4
TRUB1-202ENST00000485065 ANGP03950 147 aaKnown RBP6.29□□□□□ -1.4
TRUB1-202ENST00000485065 FAM231DQ6ZW35 169 aa6.29□□□□□ -1.4
TRUB1-202ENST00000485065 RMI2Q96E14 147 aa6.29□□□□□ -1.4
TRUB1-202ENST00000485065 TRBV25-1A0A075B6N4 114 aa6.28□□□□□ -1.4
TRUB1-202ENST00000485065 IGHV1-24A0A0C4DH33 117 aa6.28□□□□□ -1.4
TRUB1-202ENST00000485065 PRSS1P07477 247 aa6.28□□□□□ -1.4
TRUB1-202ENST00000485065 SRP19P09132 144 aaKnown RBP6.28□□□□□ -1.4
TRUB1-202ENST00000485065 TRGC1P0CF51 173 aa6.28□□□□□ -1.4
TRUB1-202ENST00000485065 TWIST1Q15672 202 aa6.28□□□□□ -1.4
TRUB1-202ENST00000485065 TMEM97Q5BJF2 176 aa6.28□□□□□ -1.4
TRUB1-202ENST00000485065 PGLYRP4Q96LB8 373 aa6.28□□□□□ -1.4
TRUB1-202ENST00000485065 A0A1B0GUV1 79 aa6.27□□□□□ -1.41
TRUB1-202ENST00000485065 USP17L23D6RBM5 183 aa6.27□□□□□ -1.41
TRUB1-202ENST00000485065 H7C1H1 209 aa6.27□□□□□ -1.41
TRUB1-202ENST00000485065 NDUFS6O75380 124 aaKnown RBP6.27□□□□□ -1.41
TRUB1-202ENST00000485065 MIAQ16674 131 aa6.27□□□□□ -1.41
TRUB1-202ENST00000485065 CLPSL2Q6UWE3 100 aa6.27□□□□□ -1.41
TRUB1-202ENST00000485065 LINC01551Q86U37 167 aa6.27□□□□□ -1.41
TRUB1-202ENST00000485065 RPL39LQ96EH5 51 aaKnown RBP6.27□□□□□ -1.41
TRUB1-202ENST00000485065 FAM210AQ96ND0 272 aa6.27□□□□□ -1.41
TRUB1-202ENST00000485065 C1orf43Q9BWL3 253 aa6.27□□□□□ -1.41
TRUB1-202ENST00000485065 FAM231BA6NCW3 169 aa6.26□□□□□ -1.41
TRUB1-202ENST00000485065 GATCO43716 136 aaKnown RBP6.26□□□□□ -1.41
TRUB1-202ENST00000485065 SLPIP03973 132 aa6.26□□□□□ -1.41
TRUB1-202ENST00000485065 REG3AQ06141 175 aa6.26□□□□□ -1.41
TRUB1-202ENST00000485065 KCNIP4Q6PIL6 250 aa6.26□□□□□ -1.41
TRUB1-202ENST00000485065 LINC01600Q96MT4 127 aa6.26□□□□□ -1.41
TRUB1-202ENST00000485065 IGLV10-54A0A075B6I4 117 aa6.25□□□□□ -1.41
TRUB1-202ENST00000485065 A0A0U1RQV1 116 aa6.25□□□□□ -1.41
TRUB1-202ENST00000485065 A8MWL6 223 aa6.25□□□□□ -1.41
TRUB1-202ENST00000485065 PANO1I0J062 215 aa6.25□□□□□ -1.41
TRUB1-202ENST00000485065 CEBPGP53567 150 aa6.25□□□□□ -1.41
TRUB1-202ENST00000485065 PKIAP61925 76 aa6.25□□□□□ -1.41
TRUB1-202ENST00000485065 CT83Q5H943 113 aa6.25□□□□□ -1.41
TRUB1-202ENST00000485065 RNF185Q96GF1 192 aa6.25□□□□□ -1.41
TRUB1-202ENST00000485065 TMEM243Q9BU79 118 aa6.25□□□□□ -1.41
TRUB1-202ENST00000485065 EIF5A2Q9GZV4 153 aaKnown RBP6.25□□□□□ -1.41
TRUB1-202ENST00000485065 FAT4Q6V0I7 4981 aa6.24□□□□□ -1.41
TRUB1-202ENST00000485065 HLA-DQA1P01909 254 aa6.24□□□□□ -1.41
TRUB1-202ENST00000485065 CRPP02741 224 aa6.24□□□□□ -1.41
TRUB1-202ENST00000485065 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.24□□□□□ -1.41
TRUB1-202ENST00000485065 TSKUQ8WUA8 353 aa6.24□□□□□ -1.41
TRUB1-202ENST00000485065 SMIM7Q9BQ49 75 aa6.24□□□□□ -1.41
TRUB1-202ENST00000485065 OSTCQ9NRP0 149 aa6.24□□□□□ -1.41
TRUB1-202ENST00000485065 V9GYV3 84 aa6.24□□□□□ -1.41
TRUB1-202ENST00000485065 TRBV6-5A0A0K0K1A5 114 aa6.23□□□□□ -1.41
TRUB1-202ENST00000485065 ZNF727A8MUV8 499 aa6.23□□□□□ -1.41
TRUB1-202ENST00000485065 RPS10P46783 165 aaKnown RBP6.23□□□□□ -1.41
TRUB1-202ENST00000485065 SDIM1Q6ZPB5 146 aa6.23□□□□□ -1.41
TRUB1-202ENST00000485065 C9orf163Q8N9P6 203 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms