RNA–Protein interactions for RNA: ENST00000477590.1

SYCP1-206, Transcript of synaptonemal complex protein 1, humanhuman

TSL 2

Gene SYCP1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-206ENST00000477590 FAM208BQ5VWN6 2430 aa-0.5□□□□□ -2.49
SYCP1-206ENST00000477590 SMIM21Q3B7S5 101 aa-0.5□□□□□ -2.49
SYCP1-206ENST00000477590 SPCS1Q9Y6A9 102 aa-0.5□□□□□ -2.49
SYCP1-206ENST00000477590 FLNAP21333 2647 aaKnown RBP-0.5□□□□□ -2.49
SYCP1-206ENST00000477590 PKD1L1Q8TDX9 2849 aa-0.5□□□□□ -2.49
SYCP1-206ENST00000477590 RPS25P62851 125 aaKnown RBP-0.51□□□□□ -2.49
SYCP1-206ENST00000477590 CASKIN1Q8WXD9 1431 aa-0.52□□□□□ -2.49
SYCP1-206ENST00000477590 S100A3P33764 101 aa-0.52□□□□□ -2.49
SYCP1-206ENST00000477590 SMCO1Q147U7 214 aa-0.52□□□□□ -2.49
SYCP1-206ENST00000477590 TMEM191AQ9H0A3 160 aa-0.52□□□□□ -2.49
SYCP1-206ENST00000477590 R4GMQ9 66 aa-0.52□□□□□ -2.49
SYCP1-206ENST00000477590 DCHS2Q6V1P9 2916 aa-0.53□□□□□ -2.49
SYCP1-206ENST00000477590 PIGBOS1A0A0B4J2F0 54 aa-0.53□□□□□ -2.49
SYCP1-206ENST00000477590 PPP1R17O96001 155 aa-0.53□□□□□ -2.49
SYCP1-206ENST00000477590 PRM1P04553 51 aa-0.53□□□□□ -2.49
SYCP1-206ENST00000477590 CEP152O94986 1710 aa-0.53□□□□□ -2.49
SYCP1-206ENST00000477590 NWD2Q9ULI1 1742 aa-0.53□□□□□ -2.49
SYCP1-206ENST00000477590 PKDREJQ9NTG1 2253 aa-0.53□□□□□ -2.49
SYCP1-206ENST00000477590 ALMS1Q8TCU4 4167 aa-0.53□□□□□ -2.49
SYCP1-206ENST00000477590 ZNF518AQ6AHZ1 1483 aa-0.54□□□□□ -2.5
SYCP1-206ENST00000477590 CCL18P55774 89 aa-0.54□□□□□ -2.5
SYCP1-206ENST00000477590 ALX1Q15699 326 aa-0.54□□□□□ -2.5
SYCP1-206ENST00000477590 Q8IZM0 81 aa-0.54□□□□□ -2.5
SYCP1-206ENST00000477590 AQP10Q96PS8 301 aa-0.54□□□□□ -2.5
SYCP1-206ENST00000477590 CHD6Q8TD26 2715 aa-0.55□□□□□ -2.5
SYCP1-206ENST00000477590 HECTD4Q9Y4D8 3996 aa-0.55□□□□□ -2.5
SYCP1-206ENST00000477590 Q5VSD8 79 aa-0.55□□□□□ -2.5
SYCP1-206ENST00000477590 SMIM4Q8WVI0 70 aa-0.55□□□□□ -2.5
SYCP1-206ENST00000477590 CCDC167Q9P0B6 97 aa-0.55□□□□□ -2.5
SYCP1-206ENST00000477590 SPEF2Q9C093 1822 aa-0.55□□□□□ -2.5
SYCP1-206ENST00000477590 IFT140Q96RY7 1462 aa-0.55□□□□□ -2.5
SYCP1-206ENST00000477590 SIX6O95475 246 aa-0.56□□□□□ -2.5
SYCP1-206ENST00000477590 HAMPP81172 84 aa-0.56□□□□□ -2.5
SYCP1-206ENST00000477590 FAT2Q9NYQ8 4349 aa-0.56□□□□□ -2.5
SYCP1-206ENST00000477590 C2CD3Q4AC94 2353 aa-0.56□□□□□ -2.5
SYCP1-206ENST00000477590 MYH8P13535 1937 aa-0.57□□□□□ -2.5
SYCP1-206ENST00000477590 CTXND1A0A1B0GTU2 59 aa-0.57□□□□□ -2.5
SYCP1-206ENST00000477590 SDF2Q99470 211 aa-0.57□□□□□ -2.5
SYCP1-206ENST00000477590 PFDN5Q99471 154 aa-0.57□□□□□ -2.5
SYCP1-206ENST00000477590 PXDNQ92626 1479 aa-0.58□□□□□ -2.5
SYCP1-206ENST00000477590 WNK3Q9BYP7 1800 aa-0.58□□□□□ -2.5
SYCP1-206ENST00000477590 TRAV13-2A0A0B4J235 113 aa-0.58□□□□□ -2.5
SYCP1-206ENST00000477590 SPRR2DP22532 72 aa-0.58□□□□□ -2.5
SYCP1-206ENST00000477590 LAMC1P11047 1609 aa-0.59□□□□□ -2.5
SYCP1-206ENST00000477590 HCG22E2RYF7 251 aa-0.59□□□□□ -2.5
SYCP1-206ENST00000477590 M0R135 149 aa-0.59□□□□□ -2.5
SYCP1-206ENST00000477590 C10orf128Q5T292 105 aa-0.59□□□□□ -2.5
SYCP1-206ENST00000477590 COPS9Q8WXC6 57 aa-0.59□□□□□ -2.5
SYCP1-206ENST00000477590 PDCD10Q9BUL8 212 aa-0.59□□□□□ -2.5
SYCP1-206ENST00000477590 BSNQ9UPA5 3926 aa-0.59□□□□□ -2.5
SYCP1-206ENST00000477590 PPRC1Q5VV67 1664 aaKnown RBP-0.59□□□□□ -2.5
SYCP1-206ENST00000477590 SPAG11BQ08648 103 aa-0.6□□□□□ -2.51
SYCP1-206ENST00000477590 DPH3Q96FX2 82 aa-0.6□□□□□ -2.51
SYCP1-206ENST00000477590 SRRM2Q9UQ35 2752 aaKnown RBP-0.6□□□□□ -2.51
SYCP1-206ENST00000477590 PRDM2Q13029 1718 aa-0.61□□□□□ -2.51
SYCP1-206ENST00000477590 BCE1O60756 84 aa-0.61□□□□□ -2.51
SYCP1-206ENST00000477590 RBM3P98179 157 aaKnown RBP-0.61□□□□□ -2.51
SYCP1-206ENST00000477590 LRP1BQ9NZR2 4599 aa-0.61□□□□□ -2.51
SYCP1-206ENST00000477590 KDM3BQ7LBC6 1761 aa-0.61□□□□□ -2.51
SYCP1-206ENST00000477590 MRC1P22897 1456 aa-0.61□□□□□ -2.51
SYCP1-206ENST00000477590 PLCE1Q9P212 2302 aa-0.61□□□□□ -2.51
SYCP1-206ENST00000477590 ERCC6L2Q5T890 1561 aa-0.62□□□□□ -2.51
SYCP1-206ENST00000477590 TENM2Q9NT68 2774 aa-0.62□□□□□ -2.51
SYCP1-206ENST00000477590 MYOM3Q5VTT5 1437 aa-0.62□□□□□ -2.51
SYCP1-206ENST00000477590 VWFP04275 2813 aa-0.62□□□□□ -2.51
SYCP1-206ENST00000477590 HIST1H1DP16402 221 aaKnown RBP-0.62□□□□□ -2.51
SYCP1-206ENST00000477590 SPRR1AP35321 89 aa-0.62□□□□□ -2.51
SYCP1-206ENST00000477590 SPAG11AQ6PDA7 123 aa-0.62□□□□□ -2.51
SYCP1-206ENST00000477590 UNC13AQ9UPW8 1703 aa-0.63□□□□□ -2.51
SYCP1-206ENST00000477590 SPAARA0A1B0GVQ0 90 aa-0.63□□□□□ -2.51
SYCP1-206ENST00000477590 DCDP81605 110 aaKnown RBP-0.63□□□□□ -2.51
SYCP1-206ENST00000477590 TTC9CQ8N5M4 171 aa-0.63□□□□□ -2.51
SYCP1-206ENST00000477590 LENEPQ9Y5L5 61 aa-0.63□□□□□ -2.51
SYCP1-206ENST00000477590 V9GYH0 126 aa-0.63□□□□□ -2.51
SYCP1-206ENST00000477590 PLXNB2O15031 1838 aa-0.64□□□□□ -2.51
SYCP1-206ENST00000477590 FXYD6-FXYD2A0A087WZ82 144 aa-0.64□□□□□ -2.51
SYCP1-206ENST00000477590 ARPC4P59998 168 aa-0.64□□□□□ -2.51
SYCP1-206ENST00000477590 KRTAP19-7Q3SYF9 63 aa-0.64□□□□□ -2.51
SYCP1-206ENST00000477590 TP53AIP1Q9HCN2 124 aa-0.64□□□□□ -2.51
SYCP1-206ENST00000477590 LRP6O75581 1613 aa-0.64□□□□□ -2.51
SYCP1-206ENST00000477590 COL6A3P12111 3177 aa-0.65□□□□□ -2.51
SYCP1-206ENST00000477590 PIEZO2Q9H5I5 2752 aa-0.65□□□□□ -2.51
SYCP1-206ENST00000477590 LOC105371267A0A1B0GV96 52 aa-0.65□□□□□ -2.51
SYCP1-206ENST00000477590 C12orf73Q69YU5 71 aa-0.65□□□□□ -2.51
SYCP1-206ENST00000477590 AGPAT4-IT1Q9H0P7 198 aa-0.65□□□□□ -2.51
SYCP1-206ENST00000477590 PDZD2O15018 2839 aa-0.66□□□□□ -2.51
SYCP1-206ENST00000477590 COX17Q14061 63 aa-0.66□□□□□ -2.52
SYCP1-206ENST00000477590 PAIP2BQ9ULR5 123 aaKnown RBP-0.66□□□□□ -2.52
SYCP1-206ENST00000477590 MAP1BP46821 2468 aaKnown RBP-0.66□□□□□ -2.52
SYCP1-206ENST00000477590 GRIN2AQ12879 1464 aa-0.67□□□□□ -2.52
SYCP1-206ENST00000477590 GVINP1Q7Z2Y8 2422 aa-0.67□□□□□ -2.52
SYCP1-206ENST00000477590 TMEM170BQ5T4T1 132 aa-0.67□□□□□ -2.52
SYCP1-206ENST00000477590 C10orf71Q711Q0 1435 aa-0.67□□□□□ -2.52
SYCP1-206ENST00000477590 LRRC37A2A6NM11 1700 aa-0.67□□□□□ -2.52
SYCP1-206ENST00000477590 PPIP5K1Q6PFW1 1433 aa-0.68□□□□□ -2.52
SYCP1-206ENST00000477590 MAP1AP78559 2803 aaPredicted RBP-0.68□□□□□ -2.52
SYCP1-206ENST00000477590 APC2O95996 2303 aa-0.69□□□□□ -2.52
SYCP1-206ENST00000477590 PRKDCP78527 4128 aaKnown RBP-0.69□□□□□ -2.52
SYCP1-206ENST00000477590 ARAP2Q8WZ64 1704 aa-0.69□□□□□ -2.52
SYCP1-206ENST00000477590 PI4KAP42356 2102 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms