RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 IFITM1P13164 125 aa2.11□□□□□ -2.07
SRGAP3-205ENST00000475560 ACBD7Q8N6N7 88 aa2.11□□□□□ -2.07
SRGAP3-205ENST00000475560 C10orf82Q8WW14 230 aa2.11□□□□□ -2.07
SRGAP3-205ENST00000475560 EFCAB5A4FU69 1503 aa2.11□□□□□ -2.07
SRGAP3-205ENST00000475560 MYO5CQ9NQX4 1742 aa2.11□□□□□ -2.07
SRGAP3-205ENST00000475560 COL6A3P12111 3177 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 ANKRD17O75179 2603 aaKnown RBP2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 ABCA6Q8N139 1617 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 NSD3Q9BZ95 1437 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 KIF1AQ12756 1690 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 GCC2Q8IWJ2 1684 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 TRAV12-3A0A0B4J271 114 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 PIGBOS1A0A0B4J2F0 54 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 A6NIN4 97 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 CCKP06307 115 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 RBM3P98179 157 aaKnown RBP2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 PP632Q6XCG6 107 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 SBSPONQ8IVN8 264 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 LCN9Q8WX39 176 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 V9GYS6 101 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 SPHKAPQ2M3C7 1700 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 IFT172Q9UG01 1749 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 TTC28Q96AY4 2481 aa2.1□□□□□ -2.07
SRGAP3-205ENST00000475560 MED12LQ86YW9 2145 aa2.09□□□□□ -2.07
SRGAP3-205ENST00000475560 ANKRD26Q9UPS8 1709 aa2.09□□□□□ -2.07
SRGAP3-205ENST00000475560 ABCC6O95255 1503 aa2.09□□□□□ -2.07
SRGAP3-205ENST00000475560 IGKV2-40A0A087WW87 121 aaPredicted RBP2.09□□□□□ -2.07
SRGAP3-205ENST00000475560 TRBV10-3A0A0K0K1G6 114 aa2.09□□□□□ -2.07
SRGAP3-205ENST00000475560 HIGD1CA8MV81 97 aa2.09□□□□□ -2.07
SRGAP3-205ENST00000475560 IGKV2D-40P01614 121 aaPredicted RBP2.09□□□□□ -2.07
SRGAP3-205ENST00000475560 SPINK8P0C7L1 97 aa2.09□□□□□ -2.07
SRGAP3-205ENST00000475560 Q5BKY6 102 aa2.09□□□□□ -2.07
SRGAP3-205ENST00000475560 UNC13BO14795 1591 aa2.09□□□□□ -2.08
SRGAP3-205ENST00000475560 TEP1Q99973 2627 aaKnown RBP2.09□□□□□ -2.08
SRGAP3-205ENST00000475560 UGGT1Q9NYU2 1555 aa2.09□□□□□ -2.08
SRGAP3-205ENST00000475560 MAST1Q9Y2H9 1570 aa2.09□□□□□ -2.08
SRGAP3-205ENST00000475560 ALPK2Q86TB3 2170 aa2.09□□□□□ -2.08
SRGAP3-205ENST00000475560 RP1L1Q8IWN7 2480 aaPredicted RBP2.09□□□□□ -2.08
SRGAP3-205ENST00000475560 WIZO95785 1651 aa2.09□□□□□ -2.08
SRGAP3-205ENST00000475560 IQGAP1P46940 1657 aa2.09□□□□□ -2.08
SRGAP3-205ENST00000475560 RREB1Q92766 1687 aa2.09□□□□□ -2.08
SRGAP3-205ENST00000475560 ANKARQ7Z5J8 1434 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 ZDBF2Q9HCK1 2354 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 CHD6Q8TD26 2715 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 FREM1Q5H8C1 2179 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 PDCD5O14737 125 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 COL5A1-AS1Q5SY13 56 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 SPTSSBQ8NFR3 76 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 PIK3C2BO00750 1634 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 GOLGB1Q14789 3259 aaKnown RBP2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 TRIOBPQ9H2D6 2365 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 KNDC1Q76NI1 1749 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 PPLO60437 1756 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 DLEC1Q9Y238 1755 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 CASKIN1Q8WXD9 1431 aa2.08□□□□□ -2.08
SRGAP3-205ENST00000475560 USP24Q9UPU5 2620 aa2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 TNRC6AQ8NDV7 1962 aaKnown RBP2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 DOPEY1Q5JWR5 2465 aa2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 APOC3P02656 99 aa2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 DCDP81605 110 aaKnown RBP2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 PYY3Q5JQD4 70 aa2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 NCMAPQ5T1S8 102 aa2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 C5orf38Q86SI9 138 aa2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 AMELYQ99218 206 aa2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 SNHG12Q9BXW3 62 aa2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 LAMA2P24043 3122 aaKnown RBP2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 LRRC9Q6ZRR7 1453 aa2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 ATP7AQ04656 1500 aa2.07□□□□□ -2.08
SRGAP3-205ENST00000475560 MYO18BQ8IUG5 2567 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 MROH2BQ7Z745 1585 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 MYOM1P52179 1685 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 PEAK1Q9H792 1746 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 NWD2Q9ULI1 1742 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 MARF1Q9Y4F3 1742 aaKnown RBP2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 LTN1O94822 1766 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 ASH1LQ9NR48 2969 aaKnown RBP2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 NBDYA0A0U1RRE5 68 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 LOC101927531A0A1B0GV80 90 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 FAM24AA6NFZ4 105 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 DEFA5Q01523 94 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 PEA15Q15121 130 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 CYP2G1PQ6ZSU1 146 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 TTC9CQ8N5M4 171 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 AQP10Q96PS8 301 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 S100A13Q99584 98 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 MYH8P13535 1937 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 MYOFQ9NZM1 2061 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 UNC80Q8N2C7 3258 aa2.06□□□□□ -2.08
SRGAP3-205ENST00000475560 ABCA12Q86UK0 2595 aa2.05□□□□□ -2.08
SRGAP3-205ENST00000475560 EXPH5Q8NEV8 1989 aa2.05□□□□□ -2.08
SRGAP3-205ENST00000475560 MUC6Q6W4X9 2439 aa2.05□□□□□ -2.08
SRGAP3-205ENST00000475560 TEX49A0A1B0GTD5 131 aa2.05□□□□□ -2.08
SRGAP3-205ENST00000475560 IGKV2-29A2NJV5 120 aaPredicted RBP2.05□□□□□ -2.08
SRGAP3-205ENST00000475560 S100A10P60903 97 aa2.05□□□□□ -2.08
SRGAP3-205ENST00000475560 ZNF720Q7Z2F6 126 aa2.05□□□□□ -2.08
SRGAP3-205ENST00000475560 SMCO4Q9NRQ5 59 aa2.05□□□□□ -2.08
SRGAP3-205ENST00000475560 FBN3Q75N90 2809 aa2.05□□□□□ -2.08
SRGAP3-205ENST00000475560 ARFGEF3Q5TH69 2177 aa2.05□□□□□ -2.08
SRGAP3-205ENST00000475560 VCANP13611 3396 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 301.3 ms