RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 V9GYV3 84 aa1.75□□□□□ -2.13
SMC5-203ENST00000475540 MYH8P13535 1937 aa1.75□□□□□ -2.13
SMC5-203ENST00000475540 ABCA4P78363 2273 aa1.74□□□□□ -2.13
SMC5-203ENST00000475540 AP4S1Q9Y587 144 aa1.74□□□□□ -2.13
SMC5-203ENST00000475540 USP9XQ93008 2570 aaPredicted RBP1.73□□□□□ -2.13
SMC5-203ENST00000475540 SNCAP37840 140 aa1.73□□□□□ -2.13
SMC5-203ENST00000475540 COL5A1-AS1Q5SY13 56 aa1.73□□□□□ -2.13
SMC5-203ENST00000475540 FLG2Q5D862 2391 aaPredicted RBP1.73□□□□□ -2.13
SMC5-203ENST00000475540 RB1CC1Q8TDY2 1594 aa1.72□□□□□ -2.13
SMC5-203ENST00000475540 SPTBP11277 2137 aa1.72□□□□□ -2.13
SMC5-203ENST00000475540 NAV2Q8IVL1 2488 aa1.72□□□□□ -2.13
SMC5-203ENST00000475540 A0A087WTM6 91 aa1.72□□□□□ -2.13
SMC5-203ENST00000475540 MPC2O95563 127 aa1.72□□□□□ -2.13
SMC5-203ENST00000475540 GNG11P61952 73 aa1.72□□□□□ -2.13
SMC5-203ENST00000475540 SPINK13Q1W4C9 94 aa1.72□□□□□ -2.13
SMC5-203ENST00000475540 LENEPQ9Y5L5 61 aa1.72□□□□□ -2.13
SMC5-203ENST00000475540 UTRNP46939 3433 aa1.72□□□□□ -2.13
SMC5-203ENST00000475540 CHD6Q8TD26 2715 aa1.72□□□□□ -2.13
SMC5-203ENST00000475540 AKAP12Q02952 1782 aa1.72□□□□□ -2.13
SMC5-203ENST00000475540 RP1L1Q8IWN7 2480 aaPredicted RBP1.72□□□□□ -2.13
SMC5-203ENST00000475540 NCOA6Q14686 2063 aaPredicted RBP1.71□□□□□ -2.13
SMC5-203ENST00000475540 DOCK1Q14185 1865 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 MED12Q93074 2177 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 TEX14Q8IWB6 1497 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 FYCO1Q9BQS8 1478 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 TRBV7-3A0A075B6L6 115 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 NAP1L6A6NFF2 107 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 LINC00032P0C843 101 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 ESPL1Q14674 2120 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 MGST2Q99735 147 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 LINC00474Q9P2X8 69 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 SCP2D1Q9UJQ7 156 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 TTC37Q6PGP7 1564 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 COL6A3P12111 3177 aa1.71□□□□□ -2.14
SMC5-203ENST00000475540 DOCK2Q92608 1830 aa1.7□□□□□ -2.14
SMC5-203ENST00000475540 ANKRD11Q6UB99 2663 aaPredicted RBP1.7□□□□□ -2.14
SMC5-203ENST00000475540 KRTDAPP60985 99 aa1.7□□□□□ -2.14
SMC5-203ENST00000475540 TEP1Q99973 2627 aaKnown RBP1.7□□□□□ -2.14
SMC5-203ENST00000475540 DPY30Q9C005 99 aa1.7□□□□□ -2.14
SMC5-203ENST00000475540 TOPAZ1Q8N9V7 1692 aa1.7□□□□□ -2.14
SMC5-203ENST00000475540 ANKRD17O75179 2603 aaKnown RBP1.7□□□□□ -2.14
SMC5-203ENST00000475540 ABCA3Q99758 1704 aa1.69□□□□□ -2.14
SMC5-203ENST00000475540 ARFGEF1Q9Y6D6 1849 aa1.69□□□□□ -2.14
SMC5-203ENST00000475540 EYSQ5T1H1 3165 aa1.69□□□□□ -2.14
SMC5-203ENST00000475540 PPP1R17O96001 155 aa1.69□□□□□ -2.14
SMC5-203ENST00000475540 TSLPQ969D9 159 aa1.69□□□□□ -2.14
SMC5-203ENST00000475540 SNHG12Q9BXW3 62 aa1.69□□□□□ -2.14
SMC5-203ENST00000475540 GAPVD1Q14C86 1478 aa1.69□□□□□ -2.14
SMC5-203ENST00000475540 BDP1A6H8Y1 2624 aa1.69□□□□□ -2.14
SMC5-203ENST00000475540 ZFHX4Q86UP3 3567 aa1.68□□□□□ -2.14
SMC5-203ENST00000475540 ABCC5O15440 1437 aa1.68□□□□□ -2.14
SMC5-203ENST00000475540 TROQ12816 1431 aaPredicted RBP1.68□□□□□ -2.14
SMC5-203ENST00000475540 PIEZO1Q92508 2521 aa1.68□□□□□ -2.14
SMC5-203ENST00000475540 PLAC4Q8WY50 150 aa1.68□□□□□ -2.14
SMC5-203ENST00000475540 DYNLRB1Q9NP97 96 aa1.68□□□□□ -2.14
SMC5-203ENST00000475540 ANKRD26Q9UPS8 1709 aa1.68□□□□□ -2.14
SMC5-203ENST00000475540 MED14O60244 1454 aa1.68□□□□□ -2.14
SMC5-203ENST00000475540 FLNBO75369 2602 aaKnown RBP1.68□□□□□ -2.14
SMC5-203ENST00000475540 SIPA1L3O60292 1781 aaPredicted RBP1.67□□□□□ -2.14
SMC5-203ENST00000475540 NSD3Q9BZ95 1437 aa1.67□□□□□ -2.14
SMC5-203ENST00000475540 ASH1LQ9NR48 2969 aaKnown RBP1.67□□□□□ -2.14
SMC5-203ENST00000475540 FXYD6P3P58550 94 aa1.67□□□□□ -2.14
SMC5-203ENST00000475540 UBA52P62987 128 aaKnown RBP1.67□□□□□ -2.14
SMC5-203ENST00000475540 R4GMQ9 66 aa1.67□□□□□ -2.14
SMC5-203ENST00000475540 TET3O43151 1660 aa1.67□□□□□ -2.14
SMC5-203ENST00000475540 KIF21AQ7Z4S6 1674 aa1.67□□□□□ -2.14
SMC5-203ENST00000475540 FASNP49327 2511 aaKnown RBP1.67□□□□□ -2.14
SMC5-203ENST00000475540 PTPN13Q12923 2485 aa1.66□□□□□ -2.14
SMC5-203ENST00000475540 EP400Q96L91 3159 aa1.66□□□□□ -2.14
SMC5-203ENST00000475540 A0A096LNT2 108 aa1.66□□□□□ -2.14
SMC5-203ENST00000475540 CCL18P55774 89 aa1.66□□□□□ -2.14
SMC5-203ENST00000475540 GNG2P59768 71 aa1.66□□□□□ -2.14
SMC5-203ENST00000475540 FAM167A-AS1Q96KT0 104 aa1.66□□□□□ -2.14
SMC5-203ENST00000475540 WFDC6Q9BQY6 131 aa1.66□□□□□ -2.14
SMC5-203ENST00000475540 NDUFA4L2Q9NRX3 87 aa1.66□□□□□ -2.14
SMC5-203ENST00000475540 UQCR10Q9UDW1 63 aa1.66□□□□□ -2.14
SMC5-203ENST00000475540 UNC80Q8N2C7 3258 aa1.66□□□□□ -2.14
SMC5-203ENST00000475540 SZT2Q5T011 3432 aa1.66□□□□□ -2.14
SMC5-203ENST00000475540 MAP2P11137 1827 aaKnown RBP1.66□□□□□ -2.14
SMC5-203ENST00000475540 PRDM2Q13029 1718 aa1.66□□□□□ -2.14
SMC5-203ENST00000475540 MYO18BQ8IUG5 2567 aa1.65□□□□□ -2.14
SMC5-203ENST00000475540 EPG5Q9HCE0 2579 aa1.65□□□□□ -2.14
SMC5-203ENST00000475540 LOC285556D6RIA3 1793 aa1.65□□□□□ -2.14
SMC5-203ENST00000475540 MRC1P22897 1456 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 CNTRLQ7Z7A1 2325 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 LOC285095A0A1B0GVY8 99 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 CRYM-AS1A6NIL9 109 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 F2Z2F3 143 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 GNGT2O14610 69 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 MT-ATP8P03928 68 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 SPAG11BQ08648 103 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 SPAG11AQ6PDA7 123 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 BAGE3Q86Y29 109 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 FAM213BQ8TBF2 198 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 Q96NJ1 140 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 TCHHQ07283 1943 aa1.65□□□□□ -2.15
SMC5-203ENST00000475540 LAMA2P24043 3122 aaKnown RBP1.65□□□□□ -2.15
SMC5-203ENST00000475540 GOLGB1Q14789 3259 aaKnown RBP1.65□□□□□ -2.15
SMC5-203ENST00000475540 DIP2BQ9P265 1576 aa1.64□□□□□ -2.15
SMC5-203ENST00000475540 GOLGA3Q08378 1498 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms