RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TPT1P8Q9HAU6 139 aa-0.37□□□□□ -2.47
ECHDC1-213ENST00000474240 WNK3Q9BYP7 1800 aa-0.37□□□□□ -2.47
ECHDC1-213ENST00000474240 ADGRB1O14514 1584 aa-0.37□□□□□ -2.47
ECHDC1-213ENST00000474240 HMCN2Q8NDA2 5059 aa-0.37□□□□□ -2.47
ECHDC1-213ENST00000474240 AKAP6Q13023 2319 aa-0.38□□□□□ -2.47
ECHDC1-213ENST00000474240 LINC00694P0DN24 101 aa-0.38□□□□□ -2.47
ECHDC1-213ENST00000474240 SPRR2DP22532 72 aa-0.38□□□□□ -2.47
ECHDC1-213ENST00000474240 CCL18P55774 89 aa-0.38□□□□□ -2.47
ECHDC1-213ENST00000474240 COX17Q14061 63 aa-0.38□□□□□ -2.47
ECHDC1-213ENST00000474240 FAM208BQ5VWN6 2430 aa-0.38□□□□□ -2.47
ECHDC1-213ENST00000474240 RYR3Q15413 4870 aa-0.38□□□□□ -2.47
ECHDC1-213ENST00000474240 ZNF518AQ6AHZ1 1483 aa-0.39□□□□□ -2.47
ECHDC1-213ENST00000474240 SPRR1AP35321 89 aa-0.39□□□□□ -2.47
ECHDC1-213ENST00000474240 COPZ1P61923 177 aa-0.39□□□□□ -2.47
ECHDC1-213ENST00000474240 SMCO1Q147U7 214 aa-0.39□□□□□ -2.47
ECHDC1-213ENST00000474240 PIGYQ3MUY2 71 aa-0.39□□□□□ -2.47
ECHDC1-213ENST00000474240 TP53AIP1Q9HCN2 124 aa-0.39□□□□□ -2.47
ECHDC1-213ENST00000474240 CCDC167Q9P0B6 97 aa-0.39□□□□□ -2.47
ECHDC1-213ENST00000474240 MYH8P13535 1937 aa-0.39□□□□□ -2.47
ECHDC1-213ENST00000474240 LRRC37A2A6NM11 1700 aa-0.39□□□□□ -2.47
ECHDC1-213ENST00000474240 CASKIN1Q8WXD9 1431 aa-0.39□□□□□ -2.47
ECHDC1-213ENST00000474240 KDM3BQ7LBC6 1761 aa-0.4□□□□□ -2.47
ECHDC1-213ENST00000474240 IFT140Q96RY7 1462 aa-0.4□□□□□ -2.47
ECHDC1-213ENST00000474240 SPEF2Q9C093 1822 aa-0.4□□□□□ -2.47
ECHDC1-213ENST00000474240 CLPSL1A2RUU4 121 aa-0.4□□□□□ -2.47
ECHDC1-213ENST00000474240 ALX1Q15699 326 aa-0.4□□□□□ -2.47
ECHDC1-213ENST00000474240 TMEM191AQ9H0A3 160 aa-0.4□□□□□ -2.47
ECHDC1-213ENST00000474240 PTPRQQ9UMZ3 2332 aa-0.4□□□□□ -2.47
ECHDC1-213ENST00000474240 UBR4Q5T4S7 5183 aa-0.4□□□□□ -2.47
ECHDC1-213ENST00000474240 DOPEY1Q5JWR5 2465 aa-0.41□□□□□ -2.47
ECHDC1-213ENST00000474240 SIX6O95475 246 aa-0.41□□□□□ -2.48
ECHDC1-213ENST00000474240 C12orf73Q69YU5 71 aa-0.41□□□□□ -2.48
ECHDC1-213ENST00000474240 V9GYH0 126 aa-0.41□□□□□ -2.48
ECHDC1-213ENST00000474240 USH2AO75445 5202 aa-0.41□□□□□ -2.48
ECHDC1-213ENST00000474240 MYH6P13533 1939 aa-0.42□□□□□ -2.48
ECHDC1-213ENST00000474240 TRAV13-2A0A0B4J235 113 aa-0.42□□□□□ -2.48
ECHDC1-213ENST00000474240 M0R135 149 aa-0.42□□□□□ -2.48
ECHDC1-213ENST00000474240 APOC3P02656 99 aa-0.42□□□□□ -2.48
ECHDC1-213ENST00000474240 C10orf128Q5T292 105 aa-0.42□□□□□ -2.48
ECHDC1-213ENST00000474240 TMEM170BQ5T4T1 132 aa-0.42□□□□□ -2.48
ECHDC1-213ENST00000474240 LENEPQ9Y5L5 61 aa-0.42□□□□□ -2.48
ECHDC1-213ENST00000474240 C10orf71Q711Q0 1435 aa-0.42□□□□□ -2.48
ECHDC1-213ENST00000474240 KIAA1109Q2LD37 5005 aa-0.42□□□□□ -2.48
ECHDC1-213ENST00000474240 PRDM2Q13029 1718 aa-0.42□□□□□ -2.48
ECHDC1-213ENST00000474240 LRP6O75581 1613 aa-0.42□□□□□ -2.48
ECHDC1-213ENST00000474240 MYOM3Q5VTT5 1437 aa-0.43□□□□□ -2.48
ECHDC1-213ENST00000474240 TRBV6-1A0A0K0K1D8 114 aa-0.43□□□□□ -2.48
ECHDC1-213ENST00000474240 LOC730098B7Z3J9 87 aa-0.43□□□□□ -2.48
ECHDC1-213ENST00000474240 SPAG11AQ6PDA7 123 aa-0.43□□□□□ -2.48
ECHDC1-213ENST00000474240 PFDN5Q99471 154 aa-0.43□□□□□ -2.48
ECHDC1-213ENST00000474240 BCL9LQ86UU0 1499 aa-0.43□□□□□ -2.48
ECHDC1-213ENST00000474240 ZNF292O60281 2723 aa-0.44□□□□□ -2.48
ECHDC1-213ENST00000474240 ARPC5O15511 151 aa-0.44□□□□□ -2.48
ECHDC1-213ENST00000474240 BCE1O60756 84 aa-0.44□□□□□ -2.48
ECHDC1-213ENST00000474240 RPS25P62851 125 aaKnown RBP-0.44□□□□□ -2.48
ECHDC1-213ENST00000474240 PDCD10Q9BUL8 212 aa-0.44□□□□□ -2.48
ECHDC1-213ENST00000474240 MRC1P22897 1456 aa-0.44□□□□□ -2.48
ECHDC1-213ENST00000474240 RNF213Q63HN8 5207 aa-0.45□□□□□ -2.48
ECHDC1-213ENST00000474240 SPAARA0A1B0GVQ0 90 aa-0.45□□□□□ -2.48
ECHDC1-213ENST00000474240 PITX3O75364 302 aa-0.45□□□□□ -2.48
ECHDC1-213ENST00000474240 TNFP01375 233 aa-0.45□□□□□ -2.48
ECHDC1-213ENST00000474240 SMIM21Q3B7S5 101 aa-0.45□□□□□ -2.48
ECHDC1-213ENST00000474240 TTC9CQ8N5M4 171 aa-0.45□□□□□ -2.48
ECHDC1-213ENST00000474240 MAFIPQ8WZ33 124 aa-0.45□□□□□ -2.48
ECHDC1-213ENST00000474240 ANP32BQ92688 251 aaKnown RBP-0.45□□□□□ -2.48
ECHDC1-213ENST00000474240 PAIP2BQ9ULR5 123 aaKnown RBP-0.45□□□□□ -2.48
ECHDC1-213ENST00000474240 HYDINQ4G0P3 5121 aa-0.45□□□□□ -2.48
ECHDC1-213ENST00000474240 PPIP5K1Q6PFW1 1433 aa-0.46□□□□□ -2.48
ECHDC1-213ENST00000474240 WDR7Q9Y4E6 1490 aa-0.46□□□□□ -2.48
ECHDC1-213ENST00000474240 CEP152O94986 1710 aa-0.46□□□□□ -2.48
ECHDC1-213ENST00000474240 HCG22E2RYF7 251 aa-0.46□□□□□ -2.48
ECHDC1-213ENST00000474240 K7EQZ3 153 aa-0.46□□□□□ -2.48
ECHDC1-213ENST00000474240 TPPP2P59282 170 aa-0.46□□□□□ -2.48
ECHDC1-213ENST00000474240 KRTAP20-2Q3LI61 65 aa-0.46□□□□□ -2.48
ECHDC1-213ENST00000474240 FLNAP21333 2647 aaKnown RBP-0.46□□□□□ -2.48
ECHDC1-213ENST00000474240 C2CD3Q4AC94 2353 aa-0.46□□□□□ -2.48
ECHDC1-213ENST00000474240 RYR1P21817 5038 aa-0.47□□□□□ -2.48
ECHDC1-213ENST00000474240 PLXNB2O15031 1838 aa-0.47□□□□□ -2.48
ECHDC1-213ENST00000474240 Q6JHZ5 121 aa-0.47□□□□□ -2.48
ECHDC1-213ENST00000474240 HSPG2P98160 4391 aa-0.47□□□□□ -2.49
ECHDC1-213ENST00000474240 UQCR11O14957 56 aa-0.48□□□□□ -2.49
ECHDC1-213ENST00000474240 COX6B1P14854 86 aa-0.48□□□□□ -2.49
ECHDC1-213ENST00000474240 BAGE2Q86Y30 109 aa-0.48□□□□□ -2.49
ECHDC1-213ENST00000474240 AGPAT4-IT1Q9H0P7 198 aa-0.48□□□□□ -2.49
ECHDC1-213ENST00000474240 EPPK1P58107 5090 aaKnown RBP-0.48□□□□□ -2.49
ECHDC1-213ENST00000474240 MYCBP2O75592 4640 aa-0.49□□□□□ -2.49
ECHDC1-213ENST00000474240 HERC1Q15751 4861 aa-0.49□□□□□ -2.49
ECHDC1-213ENST00000474240 PRM1P04553 51 aa-0.49□□□□□ -2.49
ECHDC1-213ENST00000474240 RBM3P98179 157 aaKnown RBP-0.49□□□□□ -2.49
ECHDC1-213ENST00000474240 ZANQ9Y493 2812 aa-0.49□□□□□ -2.49
ECHDC1-213ENST00000474240 GRIN2AQ12879 1464 aa-0.49□□□□□ -2.49
ECHDC1-213ENST00000474240 PLCE1Q9P212 2302 aa-0.49□□□□□ -2.49
ECHDC1-213ENST00000474240 SBF2Q86WG5 1849 aa-0.5□□□□□ -2.49
ECHDC1-213ENST00000474240 DOCK2Q92608 1830 aa-0.5□□□□□ -2.49
ECHDC1-213ENST00000474240 ARPC4P59998 168 aa-0.5□□□□□ -2.49
ECHDC1-213ENST00000474240 CFTRP13569 1480 aa-0.5□□□□□ -2.49
ECHDC1-213ENST00000474240 HERC2O95714 4834 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 LOC285095A0A1B0GVY8 99 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 FAM25AB3EWG3 89 aa-0.51□□□□□ -2.49
ECHDC1-213ENST00000474240 FAM25CB3EWG5 89 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms