RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 GABARAPL1Q9H0R8 117 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 CYSTM1Q9H1C7 97 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 MANBALQ9NQG1 85 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 TTC28Q96AY4 2481 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 NHSQ6T4R5 1651 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 CPAMD8Q8IZJ3 1885 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 AGLP35573 1532 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 PKD1L3Q7Z443 1732 aa1.86□□□□□ -2.11
CD46-213ENST00000471987 FBN3Q75N90 2809 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 PTPRSQ13332 1948 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 SNRNP200O75643 2136 aaKnown RBP1.85□□□□□ -2.11
CD46-213ENST00000471987 MYO18BQ8IUG5 2567 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 LAMA4Q16363 1823 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 hDV103S1A0JD37 113 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 A8MWP4 228 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 SLC25A20O43772 301 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 SH2D1AO60880 128 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 LY6HO94772 140 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 SUPT4H1P63272 117 aaKnown RBP1.85□□□□□ -2.11
CD46-213ENST00000471987 ZNF117Q03924 483 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 SYCNQ0VAF6 134 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 DEFB121Q5J5C9 76 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 RPL7L1Q6DKI1 246 aaKnown RBP1.85□□□□□ -2.11
CD46-213ENST00000471987 SDIM1Q6ZPB5 146 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 VMO1Q7Z5L0 202 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 DEFB107AQ8IZN7 70 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 RPRMLQ8N4K4 120 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 SMIM7Q9BQ49 75 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 TIMM21Q9BVV7 248 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 CYP4F30PQ9H0H9 118 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 DYNLRB1Q9NP97 96 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 LINC00474Q9P2X8 69 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 COL4A6Q14031 1691 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 RREB1Q92766 1687 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 FAM208AQ9UK61 1670 aaKnown RBP1.85□□□□□ -2.11
CD46-213ENST00000471987 MYO16Q9Y6X6 1858 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 PTPN13Q12923 2485 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 SPEGQ15772 3267 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 DLG5Q8TDM6 1919 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 SHROOM3Q8TF72 1996 aa1.85□□□□□ -2.11
CD46-213ENST00000471987 PAPPAQ13219 1627 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 SHPRHQ149N8 1683 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 KIAA2026Q5HYC2 2103 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 MYO9BQ13459 2157 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 TRBV6-7A0A0A0MS04 114 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 A0A0G2JND7 137 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 TRBV10-3A0A0K0K1G6 114 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 LECT2O14960 151 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 IGKV1D-33P01593 117 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 IGKV1-33P01594 117 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 IGLV1-51P01701 117 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 IGHV1-46P01743 117 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 CD24P25063 80 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 DSCR4P56555 118 aaPredicted RBP1.84□□□□□ -2.11
CD46-213ENST00000471987 ZNF791Q3KP31 576 aaPredicted RBP1.84□□□□□ -2.11
CD46-213ENST00000471987 S100A7L2Q5SY68 101 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 LYPD5Q6UWN5 251 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 ZNF826PQ6ZT77 177 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 ADM2Q7Z4H4 148 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 C6orf201Q7Z4U5 140 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 Q8N814 137 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 Q8NDZ9 215 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 NDUFA12Q9UI09 145 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 S4R3C0 116 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 ATP7AQ04656 1500 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 NEXMIFQ5QGS0 1516 aa1.84□□□□□ -2.11
CD46-213ENST00000471987 KIAA1549LQ6ZVL6 1849 aa1.84□□□□□ -2.12
CD46-213ENST00000471987 DOCK11Q5JSL3 2073 aa1.84□□□□□ -2.12
CD46-213ENST00000471987 DNAH12Q6ZR08 3092 aa1.84□□□□□ -2.12
CD46-213ENST00000471987 LCTP09848 1927 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 GREB1Q4ZG55 1949 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 PARP4Q9UKK3 1724 aaKnown RBP1.83□□□□□ -2.12
CD46-213ENST00000471987 HTTP42858 3142 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 MUC22E2RYF6 1773 aaPredicted RBP1.83□□□□□ -2.12
CD46-213ENST00000471987 SLIT2O94813 1529 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 TRBV7-3A0A075B6L6 115 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 IGKV2D-26A0A0A0MRZ7 120 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 TRBV7-1A0A0A6YYK4 115 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 IGHV3-15A0A0B4J1V0 119 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 IGHV1-3A0A0C4DH29 117 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 C19orf71A6NCJ1 209 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 A6NED7 52 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 FXYD1O00168 92 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 GCHFRP30047 84 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 RPL28P46779 137 aaKnown RBP1.83□□□□□ -2.12
CD46-213ENST00000471987 XCL1P47992 114 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 FXYD2P54710 66 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 ROMO1P60602 79 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 UBE2D3P61077 147 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 UBE2D2P62837 147 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 ZNF56Q15929 161 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 BAGE3Q86Y29 109 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 BAGE2Q86Y30 109 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 FAM19A2Q8N3H0 131 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 FAM167A-AS1Q96KT0 104 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 LINC00574Q9H8X3 128 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 TRAPPC1Q9Y5R8 145 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 PHRF1Q9P1Y6 1649 aaKnown RBP1.83□□□□□ -2.12
CD46-213ENST00000471987 RELNP78509 3460 aa1.83□□□□□ -2.12
CD46-213ENST00000471987 IQGAP1P46940 1657 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms