RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 SERP2Q8N6R1 65 aa7.53□□□□□ -1.2
NUP50-214ENST00000469163 IGLV1-47P01700 117 aa7.53□□□□□ -1.2
NUP50-214ENST00000469163 ZNF833PQ6ZTB9 187 aa7.53□□□□□ -1.2
NUP50-214ENST00000469163 TRAV8-3A0A0A6YYJ7 113 aa7.53□□□□□ -1.2
NUP50-214ENST00000469163 F8VRH5 84 aa7.53□□□□□ -1.2
NUP50-214ENST00000469163 PMAIP1Q13794 54 aa7.53□□□□□ -1.2
NUP50-214ENST00000469163 LINC00305Q7Z4B0 112 aa7.53□□□□□ -1.2
NUP50-214ENST00000469163 SMCR5Q8TEV8 140 aa7.53□□□□□ -1.2
NUP50-214ENST00000469163 H7C423 109 aa7.52□□□□□ -1.21
NUP50-214ENST00000469163 M0R3E3 92 aa7.52□□□□□ -1.21
NUP50-214ENST00000469163 IGHV3-33P01772 117 aa7.52□□□□□ -1.21
NUP50-214ENST00000469163 FXYD5Q96DB9 178 aa7.52□□□□□ -1.21
NUP50-214ENST00000469163 UBE2E1P51965 193 aa7.52□□□□□ -1.21
NUP50-214ENST00000469163 PRCDQ00LT1 54 aa7.52□□□□□ -1.21
NUP50-214ENST00000469163 C2orf83Q53S99 150 aa7.52□□□□□ -1.21
NUP50-214ENST00000469163 Q86TA4 180 aa7.52□□□□□ -1.21
NUP50-214ENST00000469163 RPL18AQ02543 176 aaKnown RBP7.52□□□□□ -1.21
NUP50-214ENST00000469163 TRAV12-2A0A075B6T6 113 aa7.51□□□□□ -1.21
NUP50-214ENST00000469163 GAS8-AS1O95177 125 aa7.51□□□□□ -1.21
NUP50-214ENST00000469163 RNASE2P10153 161 aaKnown RBP7.51□□□□□ -1.21
NUP50-214ENST00000469163 GATA1P15976 413 aaPredicted RBP7.51□□□□□ -1.21
NUP50-214ENST00000469163 FAM19A1Q7Z5A9 133 aa7.51□□□□□ -1.21
NUP50-214ENST00000469163 FAM223AQ8IWN6 122 aa7.51□□□□□ -1.21
NUP50-214ENST00000469163 Q9H3A6 140 aa7.51□□□□□ -1.21
NUP50-214ENST00000469163 H3BT86 120 aa7.51□□□□□ -1.21
NUP50-214ENST00000469163 ACYP1P07311 99 aa7.51□□□□□ -1.21
NUP50-214ENST00000469163 SDIM1Q6ZPB5 146 aa7.51□□□□□ -1.21
NUP50-214ENST00000469163 TRAV12-3A0A0B4J271 114 aa7.51□□□□□ -1.21
NUP50-214ENST00000469163 PRSS2P07478 247 aa7.51□□□□□ -1.21
NUP50-214ENST00000469163 LINC01559Q495D7 138 aa7.51□□□□□ -1.21
NUP50-214ENST00000469163 M0R1W7 72 aa7.5□□□□□ -1.21
NUP50-214ENST00000469163 COX6CP09669 75 aa7.5□□□□□ -1.21
NUP50-214ENST00000469163 DEFB1P60022 68 aa7.5□□□□□ -1.21
NUP50-214ENST00000469163 RNF182Q8N6D2 247 aa7.5□□□□□ -1.21
NUP50-214ENST00000469163 U3KQK5 164 aa7.5□□□□□ -1.21
NUP50-214ENST00000469163 ERCC8Q13216 396 aa7.5□□□□□ -1.21
NUP50-214ENST00000469163 SS18Q15532 418 aa7.5□□□□□ -1.21
NUP50-214ENST00000469163 CLEC2BQ92478 149 aa7.5□□□□□ -1.21
NUP50-214ENST00000469163 TMEM14BQ9NUH8 114 aa7.5□□□□□ -1.21
NUP50-214ENST00000469163 A0A0J9YY99 117 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 P0DMU3 169 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 FAM231AP0DMU4 169 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 FAM231CP0DMU5 169 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 FHL2Q14192 279 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 INAFM1C9JVW0 142 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 OVOL3O00110 214 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 U3KQE9 123 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 TRIAP1O43715 76 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 IGHV3-30P01768 117 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 IGHV3-30-5P0DP03 117 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 S100A7L2Q5SY68 101 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 TMEM167AQ8TBQ9 72 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 DEFB104AQ8WTQ1 72 aa7.49□□□□□ -1.21
NUP50-214ENST00000469163 IGKV3D-7A0A0C4DH55 119 aa7.48□□□□□ -1.21
NUP50-214ENST00000469163 CD69Q07108 199 aa7.48□□□□□ -1.21
NUP50-214ENST00000469163 TRBV7-1A0A0A6YYK4 115 aa7.48□□□□□ -1.21
NUP50-214ENST00000469163 CXCL5P42830 114 aa7.48□□□□□ -1.21
NUP50-214ENST00000469163 NDUFA4L2Q9NRX3 87 aa7.48□□□□□ -1.21
NUP50-214ENST00000469163 A0A087WVE0 104 aa7.48□□□□□ -1.21
NUP50-214ENST00000469163 TRBV12-3P01733 135 aa7.48□□□□□ -1.21
NUP50-214ENST00000469163 SCGB3A1Q96QR1 104 aa7.48□□□□□ -1.21
NUP50-214ENST00000469163 IGLV2-23P01705 113 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 LAGE3Q14657 143 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 C9orf139Q6ZV77 190 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 MSRB1Q9NZV6 116 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 A0A0B4J2C4 111 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 KNCNA6PVL3 124 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 ORMDL2Q53FV1 153 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 DAZ4Q86SG3 579 aaKnown RBP7.47□□□□□ -1.21
NUP50-214ENST00000469163 C5orf38Q86SI9 138 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 STHQ8IWL8 128 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 DAZ1Q9NQZ3 744 aaKnown RBP7.47□□□□□ -1.21
NUP50-214ENST00000469163 SERP1Q9Y6X1 66 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 IGHV3OR16-12A0A075B7B8 117 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 SMIM26A0A096LP01 95 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 IGHV7-81A0A0B4J1V7 117 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 SH2D1AO60880 128 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 RBM3P98179 157 aaKnown RBP7.47□□□□□ -1.21
NUP50-214ENST00000469163 PATE2Q6UY27 113 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 C20orf197Q8N268 126 aa7.47□□□□□ -1.21
NUP50-214ENST00000469163 IGHV4-31P0DP07 118 aa7.46□□□□□ -1.21
NUP50-214ENST00000469163 PSMG3-AS1Q96PY0 264 aa7.46□□□□□ -1.21
NUP50-214ENST00000469163 UPK3BQ9BT76 320 aa7.46□□□□□ -1.21
NUP50-214ENST00000469163 Q8N9W7 124 aa7.46□□□□□ -1.22
NUP50-214ENST00000469163 SLC50A1Q9BRV3 221 aa7.46□□□□□ -1.22
NUP50-214ENST00000469163 MOB4Q9Y3A3 225 aa7.46□□□□□ -1.22
NUP50-214ENST00000469163 ZNF469Q96JG9 3925 aaPredicted RBP7.46□□□□□ -1.22
NUP50-214ENST00000469163 C14orf178Q8N769 122 aaPredicted RBP7.45□□□□□ -1.22
NUP50-214ENST00000469163 KMT2BQ9UMN6 2715 aaPredicted RBP7.45□□□□□ -1.22
NUP50-214ENST00000469163 FBN1P35555 2871 aaKnown RBP7.45□□□□□ -1.22
NUP50-214ENST00000469163 MPLKIPQ8TAP9 179 aa7.45□□□□□ -1.22
NUP50-214ENST00000469163 PRR25Q96S07 402 aa7.45□□□□□ -1.22
NUP50-214ENST00000469163 LINC00474Q9P2X8 69 aa7.45□□□□□ -1.22
NUP50-214ENST00000469163 PDZD2O15018 2839 aa7.45□□□□□ -1.22
NUP50-214ENST00000469163 USP17L23D6RBM5 183 aa7.45□□□□□ -1.22
NUP50-214ENST00000469163 TMEM263Q8WUH6 116 aaKnown RBP7.45□□□□□ -1.22
NUP50-214ENST00000469163 LY6G5BQ8NDX9 201 aa7.44□□□□□ -1.22
NUP50-214ENST00000469163 HIST1H4AP62805 103 aaKnown RBP7.44□□□□□ -1.22
NUP50-214ENST00000469163 NRACQ8N912 160 aa7.44□□□□□ -1.22
NUP50-214ENST00000469163 TIMM17BO60830 172 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms