RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 BIN3Q9NQY0 253 aa8.03□□□□□ -1.12
SOX2-OT-203ENST00000466034 TRAV8-4A0A0B4J246 113 aa8.02□□□□□ -1.13
SOX2-OT-203ENST00000466034 RAB19A4D1S5 217 aa8.02□□□□□ -1.13
SOX2-OT-203ENST00000466034 P01737 135 aa8.02□□□□□ -1.13
SOX2-OT-203ENST00000466034 CNBPP62633 177 aaKnown RBP8.02□□□□□ -1.13
SOX2-OT-203ENST00000466034 MEF2BQ02080 365 aaPredicted RBP8.02□□□□□ -1.13
SOX2-OT-203ENST00000466034 REG3AQ06141 175 aa8.02□□□□□ -1.13
SOX2-OT-203ENST00000466034 DPH3P1Q9H4G8 78 aa8.02□□□□□ -1.13
SOX2-OT-203ENST00000466034 TRBV20OR9-2A0A075B6H5 130 aa8.01□□□□□ -1.13
SOX2-OT-203ENST00000466034 IFNA1P01562 189 aa8.01□□□□□ -1.13
SOX2-OT-203ENST00000466034 NKX2-5P52952 324 aaPredicted RBP8.01□□□□□ -1.13
SOX2-OT-203ENST00000466034 RPL37AP61513 92 aaKnown RBP8.01□□□□□ -1.13
SOX2-OT-203ENST00000466034 LYZL1Q6UWQ5 148 aa8.01□□□□□ -1.13
SOX2-OT-203ENST00000466034 SDIM1Q6ZPB5 146 aa8.01□□□□□ -1.13
SOX2-OT-203ENST00000466034 TMEM243Q9BU79 118 aa8.01□□□□□ -1.13
SOX2-OT-203ENST00000466034 CNFNQ9BYD5 112 aa8.01□□□□□ -1.13
SOX2-OT-203ENST00000466034 NIT2Q9NQR4 276 aa8.01□□□□□ -1.13
SOX2-OT-203ENST00000466034 BCL2P10415 239 aa8□□□□□ -1.13
SOX2-OT-203ENST00000466034 CTRLP40313 264 aa8□□□□□ -1.13
SOX2-OT-203ENST00000466034 CIRBPQ14011 172 aaKnown RBP8□□□□□ -1.13
SOX2-OT-203ENST00000466034 SERTAD4-AS1Q5TG53 156 aa8□□□□□ -1.13
SOX2-OT-203ENST00000466034 C9orf62Q8N4C0 152 aa8□□□□□ -1.13
SOX2-OT-203ENST00000466034 MED9Q9NWA0 146 aa8□□□□□ -1.13
SOX2-OT-203ENST00000466034 IGLV4-60A0A075B6I1 120 aa7.99□□□□□ -1.13
SOX2-OT-203ENST00000466034 NTF3P20783 257 aa7.99□□□□□ -1.13
SOX2-OT-203ENST00000466034 TAGLN2P37802 199 aaKnown RBP7.99□□□□□ -1.13
SOX2-OT-203ENST00000466034 NUDT10Q8NFP7 164 aa7.99□□□□□ -1.13
SOX2-OT-203ENST00000466034 NUDT11Q96G61 164 aa7.99□□□□□ -1.13
SOX2-OT-203ENST00000466034 GFRA4Q9GZZ7 299 aa7.99□□□□□ -1.13
SOX2-OT-203ENST00000466034 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.99□□□□□ -1.13
SOX2-OT-203ENST00000466034 TNXBP22105 4242 aa7.99□□□□□ -1.13
SOX2-OT-203ENST00000466034 IGLV10-54A0A075B6I4 117 aa7.98□□□□□ -1.13
SOX2-OT-203ENST00000466034 PANO1I0J062 215 aa7.98□□□□□ -1.13
SOX2-OT-203ENST00000466034 COTL1Q14019 142 aa7.98□□□□□ -1.13
SOX2-OT-203ENST00000466034 SLC51BQ86UW2 128 aa7.98□□□□□ -1.13
SOX2-OT-203ENST00000466034 TCTE3Q8IZS6 198 aa7.98□□□□□ -1.13
SOX2-OT-203ENST00000466034 UBE2L6O14933 153 aa7.97□□□□□ -1.13
SOX2-OT-203ENST00000466034 RNF185Q96GF1 192 aa7.97□□□□□ -1.13
SOX2-OT-203ENST00000466034 IGHV3-64A0A075B6Q5 118 aa7.96□□□□□ -1.14
SOX2-OT-203ENST00000466034 hDV102S1A0JD36 115 aa7.96□□□□□ -1.14
SOX2-OT-203ENST00000466034 AMTP48728 403 aa7.96□□□□□ -1.14
SOX2-OT-203ENST00000466034 HNRNPA3P51991 378 aaKnown RBP7.96□□□□□ -1.14
SOX2-OT-203ENST00000466034 GATD1Q8NB37 220 aa7.96□□□□□ -1.14
SOX2-OT-203ENST00000466034 RPP21Q9H633 154 aaKnown RBP7.96□□□□□ -1.14
SOX2-OT-203ENST00000466034 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.95□□□□□ -1.14
SOX2-OT-203ENST00000466034 K7EN84 100 aa7.95□□□□□ -1.14
SOX2-OT-203ENST00000466034 NCR2O95944 276 aa7.95□□□□□ -1.14
SOX2-OT-203ENST00000466034 SLPIP03973 132 aa7.95□□□□□ -1.14
SOX2-OT-203ENST00000466034 TWIST1Q15672 202 aa7.95□□□□□ -1.14
SOX2-OT-203ENST00000466034 H7C423 109 aa7.94□□□□□ -1.14
SOX2-OT-203ENST00000466034 C15orf56Q8N910 161 aa7.94□□□□□ -1.14
SOX2-OT-203ENST00000466034 OCC1Q8TAD7 63 aa7.94□□□□□ -1.14
SOX2-OT-203ENST00000466034 RNASE7Q9H1E1 156 aaKnown RBP7.94□□□□□ -1.14
SOX2-OT-203ENST00000466034 UBR4Q5T4S7 5183 aa7.93□□□□□ -1.14
SOX2-OT-203ENST00000466034 CFAP161Q6P656 301 aa7.93□□□□□ -1.14
SOX2-OT-203ENST00000466034 TEX261Q6UWH6 196 aa7.93□□□□□ -1.14
SOX2-OT-203ENST00000466034 SPACA4Q8TDM5 124 aa7.93□□□□□ -1.14
SOX2-OT-203ENST00000466034 GTSF1Q8WW33 167 aa7.93□□□□□ -1.14
SOX2-OT-203ENST00000466034 TRAV26-2A0A0B4J265 109 aa7.92□□□□□ -1.14
SOX2-OT-203ENST00000466034 GAGE12HA6NDE8 117 aa7.92□□□□□ -1.14
SOX2-OT-203ENST00000466034 TMEM250H0YL14 139 aa7.92□□□□□ -1.14
SOX2-OT-203ENST00000466034 Q6ZNX1 250 aa7.92□□□□□ -1.14
SOX2-OT-203ENST00000466034 Q6ZRU5 148 aa7.92□□□□□ -1.14
SOX2-OT-203ENST00000466034 FAM231DQ6ZW35 169 aa7.92□□□□□ -1.14
SOX2-OT-203ENST00000466034 SMIM15Q7Z3B0 74 aa7.92□□□□□ -1.14
SOX2-OT-203ENST00000466034 A0A087WYN8 130 aa7.91□□□□□ -1.14
SOX2-OT-203ENST00000466034 RPL39LQ96EH5 51 aaKnown RBP7.91□□□□□ -1.14
SOX2-OT-203ENST00000466034 PLAC8Q9NZF1 115 aa7.91□□□□□ -1.14
SOX2-OT-203ENST00000466034 TRBV6-5A0A0K0K1A5 114 aa7.9□□□□□ -1.14
SOX2-OT-203ENST00000466034 SDHAF1A6NFY7 115 aa7.9□□□□□ -1.14
SOX2-OT-203ENST00000466034 GATCO43716 136 aaKnown RBP7.9□□□□□ -1.14
SOX2-OT-203ENST00000466034 APCSP02743 223 aa7.9□□□□□ -1.14
SOX2-OT-203ENST00000466034 CHTF8P0CG12 524 aa7.9□□□□□ -1.14
SOX2-OT-203ENST00000466034 RPS10P46783 165 aaKnown RBP7.9□□□□□ -1.14
SOX2-OT-203ENST00000466034 FOXA3P55318 350 aaPredicted RBP7.9□□□□□ -1.14
SOX2-OT-203ENST00000466034 CT83Q5H943 113 aa7.9□□□□□ -1.14
SOX2-OT-203ENST00000466034 AMMECR1LQ6DCA0 310 aa7.9□□□□□ -1.14
SOX2-OT-203ENST00000466034 CHCHD10Q8WYQ3 142 aaPredicted RBP7.9□□□□□ -1.14
SOX2-OT-203ENST00000466034 FAM210AQ96ND0 272 aa7.9□□□□□ -1.14
SOX2-OT-203ENST00000466034 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.89□□□□□ -1.15
SOX2-OT-203ENST00000466034 GVQW2A0A096LPI5 108 aaPredicted RBP7.89□□□□□ -1.15
SOX2-OT-203ENST00000466034 IGKV2-29A2NJV5 120 aaPredicted RBP7.89□□□□□ -1.15
SOX2-OT-203ENST00000466034 A8MWL6 223 aa7.89□□□□□ -1.15
SOX2-OT-203ENST00000466034 MT1HL1P0DM35 61 aa7.89□□□□□ -1.15
SOX2-OT-203ENST00000466034 FGF6P10767 208 aa7.89□□□□□ -1.15
SOX2-OT-203ENST00000466034 ZNF25P17030 456 aaPredicted RBP7.89□□□□□ -1.15
SOX2-OT-203ENST00000466034 BLOC1S1P78537 153 aa7.89□□□□□ -1.15
SOX2-OT-203ENST00000466034 LYPD6BQ8NI32 183 aa7.89□□□□□ -1.15
SOX2-OT-203ENST00000466034 PLA2G2DQ9UNK4 145 aa7.89□□□□□ -1.15
SOX2-OT-203ENST00000466034 IGKV3OR2-268A0A0C4DH90 116 aa7.88□□□□□ -1.15
SOX2-OT-203ENST00000466034 I3L3M4 83 aa7.88□□□□□ -1.15
SOX2-OT-203ENST00000466034 NDUFS6O75380 124 aaKnown RBP7.88□□□□□ -1.15
SOX2-OT-203ENST00000466034 RNASEKQ6P5S7 137 aaKnown RBP7.88□□□□□ -1.15
SOX2-OT-203ENST00000466034 OR5A1Q8NGJ0 315 aa7.88□□□□□ -1.15
SOX2-OT-203ENST00000466034 DPH3Q96FX2 82 aa7.88□□□□□ -1.15
SOX2-OT-203ENST00000466034 FAM231BA6NCW3 169 aa7.87□□□□□ -1.15
SOX2-OT-203ENST00000466034 ESDP10768 282 aa7.87□□□□□ -1.15
SOX2-OT-203ENST00000466034 COX6A2Q02221 97 aa7.87□□□□□ -1.15
SOX2-OT-203ENST00000466034 FOXI1Q12951 378 aa7.87□□□□□ -1.15
SOX2-OT-203ENST00000466034 HIGD2BQ4VC39 106 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms