RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 SPCS1Q9Y6A9 102 aa5.29□□□□□ -1.56
NPHP1-209ENST00000461707 DNAH2Q9P225 4427 aa5.29□□□□□ -1.56
NPHP1-209ENST00000461707 ZNF815PA8K554 130 aa5.29□□□□□ -1.56
NPHP1-209ENST00000461707 C11orf72Q8NBR9 251 aa5.29□□□□□ -1.56
NPHP1-209ENST00000461707 CITED2Q99967 270 aaPredicted RBP5.29□□□□□ -1.56
NPHP1-209ENST00000461707 PPDPFQ9H3Y8 114 aa5.29□□□□□ -1.56
NPHP1-209ENST00000461707 FN1P02751 2386 aaKnown RBP5.29□□□□□ -1.56
NPHP1-209ENST00000461707 A0A0J9YXV3 536 aa5.29□□□□□ -1.56
NPHP1-209ENST00000461707 OR11H12B2RN74 326 aa5.29□□□□□ -1.56
NPHP1-209ENST00000461707 TMEM170BQ5T4T1 132 aa5.29□□□□□ -1.56
NPHP1-209ENST00000461707 OR11H2Q8NH07 326 aa5.29□□□□□ -1.56
NPHP1-209ENST00000461707 SPATA3Q8NHX4 192 aa5.29□□□□□ -1.56
NPHP1-209ENST00000461707 C4orf3Q8WVX3 66 aa5.29□□□□□ -1.56
NPHP1-209ENST00000461707 TRBV6-5A0A0K0K1A5 114 aa5.28□□□□□ -1.56
NPHP1-209ENST00000461707 IGLL5B9A064 214 aa5.28□□□□□ -1.56
NPHP1-209ENST00000461707 FOSL1P15407 271 aa5.28□□□□□ -1.56
NPHP1-209ENST00000461707 KIR2DL4Q99706 377 aa5.28□□□□□ -1.56
NPHP1-209ENST00000461707 DNAH8Q96JB1 4490 aa5.28□□□□□ -1.56
NPHP1-209ENST00000461707 RIPPLY3P57055 190 aa5.28□□□□□ -1.56
NPHP1-209ENST00000461707 PMVKQ15126 192 aa5.28□□□□□ -1.56
NPHP1-209ENST00000461707 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.28□□□□□ -1.56
NPHP1-209ENST00000461707 IGKV2-29A2NJV5 120 aaPredicted RBP5.28□□□□□ -1.56
NPHP1-209ENST00000461707 CFAP126Q5VTH2 177 aa5.28□□□□□ -1.56
NPHP1-209ENST00000461707 C1orf158Q8N1D5 194 aa5.28□□□□□ -1.56
NPHP1-209ENST00000461707 IGLV4-3A0A075B6K6 122 aa5.27□□□□□ -1.57
NPHP1-209ENST00000461707 H3BMG7 143 aa5.27□□□□□ -1.57
NPHP1-209ENST00000461707 NDUFA7O95182 113 aa5.27□□□□□ -1.57
NPHP1-209ENST00000461707 C20orf203Q8NBC4 194 aa5.27□□□□□ -1.57
NPHP1-209ENST00000461707 TRAV8-3A0A0A6YYJ7 113 aa5.27□□□□□ -1.57
NPHP1-209ENST00000461707 WFDC2Q14508 124 aa5.27□□□□□ -1.57
NPHP1-209ENST00000461707 LINC01587Q99440 93 aa5.27□□□□□ -1.57
NPHP1-209ENST00000461707 A0A0J9YY99 117 aa5.27□□□□□ -1.57
NPHP1-209ENST00000461707 IGHV3-53P01767 116 aa5.27□□□□□ -1.57
NPHP1-209ENST00000461707 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.27□□□□□ -1.57
NPHP1-209ENST00000461707 GIG44P09565 113 aaPredicted RBP5.26□□□□□ -1.57
NPHP1-209ENST00000461707 DYNLRB2Q8TF09 96 aa5.26□□□□□ -1.57
NPHP1-209ENST00000461707 TRPT1Q86TN4 253 aaKnown RBP5.26□□□□□ -1.57
NPHP1-209ENST00000461707 SYT8Q8NBV8 401 aa5.26□□□□□ -1.57
NPHP1-209ENST00000461707 CHCHD7Q9BUK0 85 aa5.26□□□□□ -1.57
NPHP1-209ENST00000461707 I3L3M4 83 aa5.26□□□□□ -1.57
NPHP1-209ENST00000461707 ZNF22P17026 224 aaPredicted RBP5.26□□□□□ -1.57
NPHP1-209ENST00000461707 NSUN5P1Q3KNT7 163 aa5.26□□□□□ -1.57
NPHP1-209ENST00000461707 SCGB1D4Q6XE38 83 aa5.26□□□□□ -1.57
NPHP1-209ENST00000461707 SH2D6Q7Z4S9 175 aa5.26□□□□□ -1.57
NPHP1-209ENST00000461707 LINC01006Q8NI28 216 aa5.26□□□□□ -1.57
NPHP1-209ENST00000461707 TIMM17AQ99595 171 aa5.26□□□□□ -1.57
NPHP1-209ENST00000461707 PKHD1P08F94 4074 aa5.26□□□□□ -1.57
NPHP1-209ENST00000461707 CCL24O00175 119 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 INSL3P51460 131 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 KRTAP10-3P60369 221 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 ZNF479Q96JC4 524 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 SPXQ9BT56 116 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 APOMO95445 188 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 ALMS1Q8TCU4 4167 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 TRGV11A0A075B6L2 103 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 LINC01549A6NIU2 74 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 PPP1R17O96001 155 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 FABP2P12104 132 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 PCP4P48539 62 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 C10orf126Q8N4M7 172 aa5.25□□□□□ -1.57
NPHP1-209ENST00000461707 TMEM223A0PJW6 202 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 M0R2P5 195 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 SAMD13Q5VXD3 122 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 Q6ZTI0 123 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 YAE1D1Q9NRH1 226 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 PKD1P98161 4303 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 TEX48A0A1B0GUV7 120 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 PGPEP1Q9NXJ5 209 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 PEMTQ9UBM1 199 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 J3QQQ9 107 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 IGHV3-30P01768 117 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 IGHV3-30-5P0DP03 117 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 SRSF9Q13242 221 aaKnown RBP eCLIP5.24□□□□□ -1.57
NPHP1-209ENST00000461707 Q6ZUT4 128 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 TMEM141Q96I45 108 aa5.24□□□□□ -1.57
NPHP1-209ENST00000461707 LOC100131303A0A0U1RQF7 123 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 RHODO00212 210 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 TSPAN13O95857 204 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 CFC1BP0CG36 223 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 CFC1P0CG37 223 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 COX6A2Q02221 97 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 RRN3P1Q2M238 152 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 ADAMTSL4-AS1Q5T5F5 129 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 GTF2H5Q6ZYL4 71 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 C16orf95Q9H693 158 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 C19orf73Q9NVV2 129 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 RPL35AP18077 110 aaKnown RBP5.23□□□□□ -1.57
NPHP1-209ENST00000461707 SMCPP49901 116 aaPredicted RBP5.23□□□□□ -1.57
NPHP1-209ENST00000461707 SCGB2A2Q13296 93 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 PRO0461Q9UI25 63 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 HIVEP1P15822 2718 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 UBE2D1P51668 147 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 NPC2P61916 151 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 NFE4Q86UQ8 179 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 UBE2D4Q9Y2X8 147 aa5.23□□□□□ -1.57
NPHP1-209ENST00000461707 PLAC8L1A1L4L8 177 aa5.22□□□□□ -1.57
NPHP1-209ENST00000461707 NTM-AS1Q6ZSK4 140 aa5.22□□□□□ -1.57
NPHP1-209ENST00000461707 VPS25Q9BRG1 176 aa5.22□□□□□ -1.57
NPHP1-209ENST00000461707 VCX2Q9H322 139 aa5.22□□□□□ -1.57
NPHP1-209ENST00000461707 TNFRSF18Q9Y5U5 241 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms