RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 EREGO14944 169 aa11.73□□□□□ -0.53
MRPL28-207ENST00000461550 CDPF1Q6NVV7 123 aa11.73□□□□□ -0.53
MRPL28-207ENST00000461550 MRPL52Q86TS9 123 aaKnown RBP11.73□□□□□ -0.53
MRPL28-207ENST00000461550 IMMP2LQ96T52 175 aa11.73□□□□□ -0.53
MRPL28-207ENST00000461550 APOBP04114 4563 aaKnown RBP11.72□□□□□ -0.53
MRPL28-207ENST00000461550 CT83Q5H943 113 aa11.72□□□□□ -0.53
MRPL28-207ENST00000461550 F2Z2F3 143 aa11.71□□□□□ -0.53
MRPL28-207ENST00000461550 MAPKAPK5-AS1Q8N8E1 139 aa11.71□□□□□ -0.53
MRPL28-207ENST00000461550 PGLYRP4Q96LB8 373 aa11.71□□□□□ -0.53
MRPL28-207ENST00000461550 IBA57-AS1B1ANH7 110 aa11.7□□□□□ -0.54
MRPL28-207ENST00000461550 CACNG7P62955 275 aa11.7□□□□□ -0.54
MRPL28-207ENST00000461550 TSKUQ8WUA8 353 aa11.7□□□□□ -0.54
MRPL28-207ENST00000461550 TMEM18Q96B42 140 aa11.7□□□□□ -0.54
MRPL28-207ENST00000461550 NTF3P20783 257 aa11.7□□□□□ -0.54
MRPL28-207ENST00000461550 CTRLP40313 264 aa11.7□□□□□ -0.54
MRPL28-207ENST00000461550 KCNIP4Q6PIL6 250 aa11.7□□□□□ -0.54
MRPL28-207ENST00000461550 PGPEP1Q9NXJ5 209 aa11.7□□□□□ -0.54
MRPL28-207ENST00000461550 ABCA13Q86UQ4 5058 aa11.69□□□□□ -0.54
MRPL28-207ENST00000461550 A0A1B0GV90 55 aa11.69□□□□□ -0.54
MRPL28-207ENST00000461550 PSCAO43653 123 aa11.69□□□□□ -0.54
MRPL28-207ENST00000461550 TWIST1Q15672 202 aa11.69□□□□□ -0.54
MRPL28-207ENST00000461550 IQCJQ1A5X6 159 aa11.69□□□□□ -0.54
MRPL28-207ENST00000461550 HIGD1CA8MV81 97 aa11.68□□□□□ -0.54
MRPL28-207ENST00000461550 PDZD11Q5EBL8 140 aa11.68□□□□□ -0.54
MRPL28-207ENST00000461550 SMIM27A0A1W2PRY6 76 aa11.67□□□□□ -0.54
MRPL28-207ENST00000461550 FOXA3P55318 350 aaPredicted RBP11.67□□□□□ -0.54
MRPL28-207ENST00000461550 WDR73Q6P4I2 378 aa11.67□□□□□ -0.54
MRPL28-207ENST00000461550 ZNF664Q8N3J9 261 aa11.67□□□□□ -0.54
MRPL28-207ENST00000461550 AP1S3Q96PC3 154 aa11.67□□□□□ -0.54
MRPL28-207ENST00000461550 GFRA4Q9GZZ7 299 aa11.67□□□□□ -0.54
MRPL28-207ENST00000461550 TRAV9-1A0A075B6T8 112 aa11.66□□□□□ -0.54
MRPL28-207ENST00000461550 FAM231BA6NCW3 169 aa11.66□□□□□ -0.54
MRPL28-207ENST00000461550 SMIM17P0DL12 118 aa11.66□□□□□ -0.54
MRPL28-207ENST00000461550 ZNF56Q15929 161 aa11.66□□□□□ -0.54
MRPL28-207ENST00000461550 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
MRPL28-207ENST00000461550 PRO1933Q9H354 126 aa11.66□□□□□ -0.54
MRPL28-207ENST00000461550 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
MRPL28-207ENST00000461550 LRCOL1A6NCL2 159 aa11.65□□□□□ -0.54
MRPL28-207ENST00000461550 F5H697 171 aa11.65□□□□□ -0.54
MRPL28-207ENST00000461550 MGPP08493 103 aa11.65□□□□□ -0.54
MRPL28-207ENST00000461550 NUP35Q8NFH5 326 aa11.65□□□□□ -0.54
MRPL28-207ENST00000461550 CNFNQ9BYD5 112 aa11.65□□□□□ -0.54
MRPL28-207ENST00000461550 KIF25-AS1Q9Y6Z4 181 aa11.65□□□□□ -0.54
MRPL28-207ENST00000461550 KRTAP10-1P60331 282 aa11.64□□□□□ -0.55
MRPL28-207ENST00000461550 BORCS7Q96B45 105 aa11.64□□□□□ -0.55
MRPL28-207ENST00000461550 NAT8BQ9UHF3 227 aa11.64□□□□□ -0.55
MRPL28-207ENST00000461550 RPL36AP83881 106 aaKnown RBP11.63□□□□□ -0.55
MRPL28-207ENST00000461550 RPL36ALQ969Q0 106 aaKnown RBP11.63□□□□□ -0.55
MRPL28-207ENST00000461550 TRBV10-1A0A0K0K1A3 114 aa11.63□□□□□ -0.55
MRPL28-207ENST00000461550 A0A1B0GUT8 65 aa11.63□□□□□ -0.55
MRPL28-207ENST00000461550 RAB4AP20338 218 aa11.63□□□□□ -0.55
MRPL28-207ENST00000461550 UBE2D3P61077 147 aa11.63□□□□□ -0.55
MRPL28-207ENST00000461550 UBE2D2P62837 147 aa11.63□□□□□ -0.55
MRPL28-207ENST00000461550 LAGE3Q14657 143 aa11.63□□□□□ -0.55
MRPL28-207ENST00000461550 Q8N1X5 172 aa11.63□□□□□ -0.55
MRPL28-207ENST00000461550 TRBV7-3A0A075B6L6 115 aa11.62□□□□□ -0.55
MRPL28-207ENST00000461550 TCAPO15273 167 aa11.62□□□□□ -0.55
MRPL28-207ENST00000461550 DNAJC30Q96LL9 226 aa11.62□□□□□ -0.55
MRPL28-207ENST00000461550 DPH3P1Q9H4G8 78 aa11.62□□□□□ -0.55
MRPL28-207ENST00000461550 WFDC2Q14508 124 aa11.61□□□□□ -0.55
MRPL28-207ENST00000461550 NIT1Q86X76 327 aa11.61□□□□□ -0.55
MRPL28-207ENST00000461550 NEXN-AS1Q8NBZ9 246 aa11.61□□□□□ -0.55
MRPL28-207ENST00000461550 M0R143 59 aa11.6□□□□□ -0.55
MRPL28-207ENST00000461550 ESDP10768 282 aa11.6□□□□□ -0.55
MRPL28-207ENST00000461550 RIGQ13278 110 aa11.6□□□□□ -0.55
MRPL28-207ENST00000461550 SMIM15Q7Z3B0 74 aa11.6□□□□□ -0.55
MRPL28-207ENST00000461550 IGLV5-52A0A0A0MRZ9 124 aa11.59□□□□□ -0.55
MRPL28-207ENST00000461550 LECT2O14960 151 aa11.59□□□□□ -0.55
MRPL28-207ENST00000461550 GCSHP23434 173 aa11.59□□□□□ -0.55
MRPL28-207ENST00000461550 XGP55808 180 aa11.59□□□□□ -0.55
MRPL28-207ENST00000461550 SUMO4Q6EEV6 95 aa11.59□□□□□ -0.55
MRPL28-207ENST00000461550 MRPL54Q6P161 138 aaKnown RBP11.59□□□□□ -0.55
MRPL28-207ENST00000461550 Q8N814 137 aa11.59□□□□□ -0.55
MRPL28-207ENST00000461550 TRAV8-3A0A0A6YYJ7 113 aa11.58□□□□□ -0.56
MRPL28-207ENST00000461550 TM2D2Q9BX73 214 aa11.58□□□□□ -0.56
MRPL28-207ENST00000461550 KLK12Q9UKR0 248 aa11.58□□□□□ -0.56
MRPL28-207ENST00000461550 CAMPP49913 170 aa11.57□□□□□ -0.56
MRPL28-207ENST00000461550 HAMPP81172 84 aa11.57□□□□□ -0.56
MRPL28-207ENST00000461550 TRAPPC1Q9Y5R8 145 aa11.57□□□□□ -0.56
MRPL28-207ENST00000461550 A0A087WX48 190 aa11.57□□□□□ -0.56
MRPL28-207ENST00000461550 TRAV26-2A0A0B4J265 109 aa11.57□□□□□ -0.56
MRPL28-207ENST00000461550 TRBV6-8A0A0A6YYG3 113 aa11.56□□□□□ -0.56
MRPL28-207ENST00000461550 A0A1B0GXF2 115 aa11.56□□□□□ -0.56
MRPL28-207ENST00000461550 M0QY20 66 aa11.56□□□□□ -0.56
MRPL28-207ENST00000461550 COX19Q49B96 90 aa11.56□□□□□ -0.56
MRPL28-207ENST00000461550 ATP5L2Q7Z4Y8 100 aa11.56□□□□□ -0.56
MRPL28-207ENST00000461550 UBE2WQ96B02 151 aa11.56□□□□□ -0.56
MRPL28-207ENST00000461550 TMEM191AQ9H0A3 160 aa11.56□□□□□ -0.56
MRPL28-207ENST00000461550 TMEM262E9PQX1 116 aa11.55□□□□□ -0.56
MRPL28-207ENST00000461550 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
MRPL28-207ENST00000461550 BAALCQ8WXS3 180 aa11.55□□□□□ -0.56
MRPL28-207ENST00000461550 IGKV2D-24A0A075B6R9 120 aa11.54□□□□□ -0.56
MRPL28-207ENST00000461550 HBBP68871 147 aa11.54□□□□□ -0.56
MRPL28-207ENST00000461550 RASL11AQ6T310 242 aa11.54□□□□□ -0.56
MRPL28-207ENST00000461550 AMN1Q8IY45 258 aa11.54□□□□□ -0.56
MRPL28-207ENST00000461550 GATD1Q8NB37 220 aa11.54□□□□□ -0.56
MRPL28-207ENST00000461550 SNHG12Q9BXW3 62 aa11.54□□□□□ -0.56
MRPL28-207ENST00000461550 A0A1B0GW15 77 aa11.53□□□□□ -0.56
MRPL28-207ENST00000461550 H7C1H1 209 aa11.53□□□□□ -0.56
MRPL28-207ENST00000461550 SCGB1D1O95968 90 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms