RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 DEFB119Q8N690 84 aa1.05□□□□□ -2.24
PTPRC-207ENST00000418674 KRTAP4-1Q9BYQ7 146 aa1.05□□□□□ -2.24
PTPRC-207ENST00000418674 SIPA1L3O60292 1781 aaPredicted RBP1.05□□□□□ -2.24
PTPRC-207ENST00000418674 REV3LO60673 3130 aa1.05□□□□□ -2.24
PTPRC-207ENST00000418674 VWFP04275 2813 aa1.05□□□□□ -2.24
PTPRC-207ENST00000418674 C10orf71Q711Q0 1435 aa1.05□□□□□ -2.24
PTPRC-207ENST00000418674 HELZ2Q9BYK8 2649 aaKnown RBP1.04□□□□□ -2.24
PTPRC-207ENST00000418674 LRRC37A3O60309 1634 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 NBEAL2Q6ZNJ1 2754 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 MAP2P11137 1827 aaKnown RBP1.04□□□□□ -2.24
PTPRC-207ENST00000418674 RBAKDNA6NC62 111 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 CCL3L1P16619 93 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 SNCAP37840 140 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 SSBP1Q04837 148 aaKnown RBP1.04□□□□□ -2.24
PTPRC-207ENST00000418674 ZNF56Q15929 161 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 COL5A1-AS1Q5SY13 56 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 MYOZ3Q8TDC0 251 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 PPP1R1CQ8WVI7 109 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 LINC00208Q96KT6 92 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 LINC00312Q9Y6C7 94 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 PPIP5K1Q6PFW1 1433 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 SCAPERQ9BY12 1400 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 RANBP2P49792 3224 aaKnown RBP1.04□□□□□ -2.24
PTPRC-207ENST00000418674 PIEZO1Q92508 2521 aa1.04□□□□□ -2.24
PTPRC-207ENST00000418674 GCN1Q92616 2671 aaKnown RBP1.03□□□□□ -2.24
PTPRC-207ENST00000418674 MED12Q93074 2177 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 H3BQ15 152 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 PRB1P04280 392 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 CAV3P56539 151 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 C10orf128Q5T292 105 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 FAM74A4Q5TZK3 123 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 COX7B2Q8TF08 81 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 CCL19Q99731 98 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 SNHG12Q9BXW3 62 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 CYP4F30PQ9H0H9 118 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 BET1LQ9NYM9 111 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 AP4S1Q9Y587 144 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 COL6A5A8TX70 2615 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 FYCO1Q9BQS8 1478 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 DNAH12Q6ZR08 3092 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 RB1CC1Q8TDY2 1594 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 KIAA1551Q9HCM1 1747 aa1.03□□□□□ -2.24
PTPRC-207ENST00000418674 NAV3Q8IVL0 2385 aa1.03□□□□□ -2.25
PTPRC-207ENST00000418674 MYO9AB2RTY4 2548 aa1.03□□□□□ -2.25
PTPRC-207ENST00000418674 SPTBN4Q9H254 2564 aa1.02□□□□□ -2.25
PTPRC-207ENST00000418674 MKI67P46013 3256 aaKnown RBP1.02□□□□□ -2.25
PTPRC-207ENST00000418674 TRBV7-1A0A0A6YYK4 115 aa1.02□□□□□ -2.25
PTPRC-207ENST00000418674 A0A1W2PPM0 123 aa1.02□□□□□ -2.25
PTPRC-207ENST00000418674 CLPSL1A2RUU4 121 aa1.02□□□□□ -2.25
PTPRC-207ENST00000418674 GNG2P59768 71 aa1.02□□□□□ -2.25
PTPRC-207ENST00000418674 GNG11P61952 73 aa1.02□□□□□ -2.25
PTPRC-207ENST00000418674 KLKP1Q107X0 134 aa1.02□□□□□ -2.25
PTPRC-207ENST00000418674 TSLPQ969D9 159 aa1.02□□□□□ -2.25
PTPRC-207ENST00000418674 DNHD1Q96M86 4753 aa1.02□□□□□ -2.25
PTPRC-207ENST00000418674 BAZ1AQ9NRL2 1556 aaPredicted RBP1.02□□□□□ -2.25
PTPRC-207ENST00000418674 LINC00474Q9P2X8 69 aa1.02□□□□□ -2.25
PTPRC-207ENST00000418674 KIAA0100Q14667 2235 aaKnown RBP1.01□□□□□ -2.25
PTPRC-207ENST00000418674 SPTBN5Q9NRC6 3674 aaKnown RBP1.01□□□□□ -2.25
PTPRC-207ENST00000418674 GAPVD1Q14C86 1478 aa1.01□□□□□ -2.25
PTPRC-207ENST00000418674 TEX14Q8IWB6 1497 aa1.01□□□□□ -2.25
PTPRC-207ENST00000418674 RAPGEF2Q9Y4G8 1499 aa1.01□□□□□ -2.25
PTPRC-207ENST00000418674 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.01□□□□□ -2.25
PTPRC-207ENST00000418674 TRBV30A0A0K0K1B3 111 aa1.01□□□□□ -2.25
PTPRC-207ENST00000418674 LINC00032P0C843 101 aa1.01□□□□□ -2.25
PTPRC-207ENST00000418674 LYNX1P0DP58 116 aa1.01□□□□□ -2.25
PTPRC-207ENST00000418674 EFNA4P52798 201 aa1.01□□□□□ -2.25
PTPRC-207ENST00000418674 ELOF1P60002 83 aaKnown RBP1.01□□□□□ -2.25
PTPRC-207ENST00000418674 UBA52P62987 128 aaKnown RBP1.01□□□□□ -2.25
PTPRC-207ENST00000418674 KRTAP21-3Q3LHN1 58 aa1.01□□□□□ -2.25
PTPRC-207ENST00000418674 LINC00575Q6W349 94 aa1.01□□□□□ -2.25
PTPRC-207ENST00000418674 DPY30Q9C005 99 aa1.01□□□□□ -2.25
PTPRC-207ENST00000418674 GOLGB1Q14789 3259 aaKnown RBP1.01□□□□□ -2.25
PTPRC-207ENST00000418674 KIAA1109Q2LD37 5005 aa1.01□□□□□ -2.25
PTPRC-207ENST00000418674 TOP2BQ02880 1626 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 LAMC3Q9Y6N6 1575 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 PDE4DIPQ5VU43 2346 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 PXDNQ92626 1479 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 ABCC5O15440 1437 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 NCOA6Q14686 2063 aaPredicted RBP1□□□□□ -2.25
PTPRC-207ENST00000418674 CENPFP49454 3210 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 TRBV7-3A0A075B6L6 115 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 NAP1L6A6NFF2 107 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 GNGT2O14610 69 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 MT-ATP8P03928 68 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 EDDM3BP56851 147 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 Q9H521 79 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 TMEM14BQ9NUH8 114 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 SCP2D1Q9UJQ7 156 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 V9GYV3 84 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 RGPD4Q7Z3J3 1758 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 KDM5AP29375 1690 aaKnown RBP1□□□□□ -2.25
PTPRC-207ENST00000418674 SPAG17Q6Q759 2223 aa1□□□□□ -2.25
PTPRC-207ENST00000418674 ANKHD1Q8IWZ3 2542 aaKnown RBP0.99□□□□□ -2.25
PTPRC-207ENST00000418674 RYR1P21817 5038 aa0.99□□□□□ -2.25
PTPRC-207ENST00000418674 GOLGA3Q08378 1498 aa0.99□□□□□ -2.25
PTPRC-207ENST00000418674 SHANK2Q9UPX8 1470 aa0.99□□□□□ -2.25
PTPRC-207ENST00000418674 TROQ12816 1431 aaPredicted RBP0.99□□□□□ -2.25
PTPRC-207ENST00000418674 NSD3Q9BZ95 1437 aa0.99□□□□□ -2.25
PTPRC-207ENST00000418674 IFT172Q9UG01 1749 aa0.99□□□□□ -2.25
PTPRC-207ENST00000418674 NOTCH1P46531 2555 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms