RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 TP53TG3Q9ULZ0 132 aa12.95□□□□□ -0.34
PHRF1-202ENST00000413872 GAGE12HA6NDE8 117 aa12.95□□□□□ -0.34
PHRF1-202ENST00000413872 hADV29S1A0JD25 119 aa12.95□□□□□ -0.34
PHRF1-202ENST00000413872 IGLV1-40P01703 118 aa12.95□□□□□ -0.34
PHRF1-202ENST00000413872 ACYP1P07311 99 aa12.94□□□□□ -0.34
PHRF1-202ENST00000413872 CRYBA4P53673 196 aa12.94□□□□□ -0.34
PHRF1-202ENST00000413872 TLN1Q9Y490 2541 aaKnown RBP12.94□□□□□ -0.34
PHRF1-202ENST00000413872 NDUFA7O95182 113 aa12.94□□□□□ -0.34
PHRF1-202ENST00000413872 RNF183Q96D59 192 aa12.94□□□□□ -0.34
PHRF1-202ENST00000413872 ZFAND2AQ8N6M9 145 aa12.93□□□□□ -0.34
PHRF1-202ENST00000413872 TRBV6-4A0A1B0GX49 114 aa12.93□□□□□ -0.34
PHRF1-202ENST00000413872 SORL1Q92673 2214 aa12.93□□□□□ -0.34
PHRF1-202ENST00000413872 CDSNQ15517 529 aa12.93□□□□□ -0.34
PHRF1-202ENST00000413872 C10orf99Q6UWK7 81 aa12.93□□□□□ -0.34
PHRF1-202ENST00000413872 Q6ZUT4 128 aa12.93□□□□□ -0.34
PHRF1-202ENST00000413872 REG3AQ06141 175 aa12.93□□□□□ -0.34
PHRF1-202ENST00000413872 DIRC1Q969H9 104 aa12.93□□□□□ -0.34
PHRF1-202ENST00000413872 UFSP1Q6NVU6 142 aa12.92□□□□□ -0.34
PHRF1-202ENST00000413872 KIR2DL5BQ8NHK3 375 aa12.92□□□□□ -0.34
PHRF1-202ENST00000413872 LINC00322Q6ZN03 302 aaPredicted RBP12.92□□□□□ -0.34
PHRF1-202ENST00000413872 IGHV4-4A0A075B6R2 117 aa12.92□□□□□ -0.34
PHRF1-202ENST00000413872 ANKRD29Q8N6D5 301 aa12.92□□□□□ -0.34
PHRF1-202ENST00000413872 SPATA12Q7Z6I5 190 aa12.91□□□□□ -0.34
PHRF1-202ENST00000413872 MIR7-3HGQ8N6C7 128 aa12.91□□□□□ -0.34
PHRF1-202ENST00000413872 PIEZO2Q9H5I5 2752 aa12.91□□□□□ -0.34
PHRF1-202ENST00000413872 TRAV10A0A0B4J240 114 aa12.9□□□□□ -0.34
PHRF1-202ENST00000413872 C15orf53Q8NAA6 179 aa12.9□□□□□ -0.34
PHRF1-202ENST00000413872 TDRG1Q3Y452 100 aa12.89□□□□□ -0.35
PHRF1-202ENST00000413872 LINC00269Q8N2A0 174 aa12.89□□□□□ -0.35
PHRF1-202ENST00000413872 LINC00482Q8N8I6 264 aa12.89□□□□□ -0.35
PHRF1-202ENST00000413872 RS1O15537 224 aa12.89□□□□□ -0.35
PHRF1-202ENST00000413872 NDUFB1O75438 58 aa12.89□□□□□ -0.35
PHRF1-202ENST00000413872 C4orf48Q5BLP8 95 aa12.89□□□□□ -0.35
PHRF1-202ENST00000413872 CRYGDP07320 174 aa12.88□□□□□ -0.35
PHRF1-202ENST00000413872 NCR3O14931 201 aa12.88□□□□□ -0.35
PHRF1-202ENST00000413872 FRMD6-AS1P0C7T7 363 aa12.88□□□□□ -0.35
PHRF1-202ENST00000413872 CFAP126Q5VTH2 177 aa12.88□□□□□ -0.35
PHRF1-202ENST00000413872 JMJD7-PLA2G4BH0Y9G9 81 aa12.87□□□□□ -0.35
PHRF1-202ENST00000413872 P0DMU3 169 aa12.87□□□□□ -0.35
PHRF1-202ENST00000413872 FAM231AP0DMU4 169 aa12.87□□□□□ -0.35
PHRF1-202ENST00000413872 FAM231CP0DMU5 169 aa12.87□□□□□ -0.35
PHRF1-202ENST00000413872 ABCA2Q9BZC7 2435 aa12.87□□□□□ -0.35
PHRF1-202ENST00000413872 C9orf153Q5TBE3 101 aa12.87□□□□□ -0.35
PHRF1-202ENST00000413872 NEXN-AS1Q8NBZ9 246 aa12.87□□□□□ -0.35
PHRF1-202ENST00000413872 DAND5Q8N907 189 aa12.87□□□□□ -0.35
PHRF1-202ENST00000413872 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.86□□□□□ -0.35
PHRF1-202ENST00000413872 CHCHD10Q8WYQ3 142 aaPredicted RBP12.86□□□□□ -0.35
PHRF1-202ENST00000413872 TRBV6-8A0A0A6YYG3 113 aa12.85□□□□□ -0.35
PHRF1-202ENST00000413872 CEMP1Q6PRD7 247 aaPredicted RBP12.85□□□□□ -0.35
PHRF1-202ENST00000413872 LINC01620Q4KN68 170 aa12.85□□□□□ -0.35
PHRF1-202ENST00000413872 M0QY20 66 aa12.84□□□□□ -0.35
PHRF1-202ENST00000413872 TRACP01848 142 aa12.84□□□□□ -0.35
PHRF1-202ENST00000413872 B9D2Q9BPU9 175 aa12.84□□□□□ -0.35
PHRF1-202ENST00000413872 NDUFS5O43920 106 aa12.84□□□□□ -0.35
PHRF1-202ENST00000413872 LINC00467Q9BRT7 94 aa12.84□□□□□ -0.35
PHRF1-202ENST00000413872 PRRC2AP48634 2157 aaKnown RBP12.84□□□□□ -0.35
PHRF1-202ENST00000413872 GDF5OSQ5U4N7 250 aa12.84□□□□□ -0.35
PHRF1-202ENST00000413872 FXYD2P54710 66 aa12.83□□□□□ -0.36
PHRF1-202ENST00000413872 MIAQ16674 131 aa12.83□□□□□ -0.36
PHRF1-202ENST00000413872 FAM110AQ9BQ89 295 aa12.83□□□□□ -0.36
PHRF1-202ENST00000413872 TTTY13Q9BZ97 58 aa12.83□□□□□ -0.36
PHRF1-202ENST00000413872 IGHV4-28A0A0C4DH34 117 aa12.83□□□□□ -0.36
PHRF1-202ENST00000413872 TRBV6-5A0A0K0K1A5 114 aa12.83□□□□□ -0.36
PHRF1-202ENST00000413872 AVPP01185 164 aa12.83□□□□□ -0.36
PHRF1-202ENST00000413872 HIGD2BQ4VC39 106 aa12.83□□□□□ -0.36
PHRF1-202ENST00000413872 SPANXCQ9NY87 97 aa12.82□□□□□ -0.36
PHRF1-202ENST00000413872 KLLNB2CW77 178 aa12.82□□□□□ -0.36
PHRF1-202ENST00000413872 CRIP2P52943 208 aaPredicted RBP12.82□□□□□ -0.36
PHRF1-202ENST00000413872 MYO9AB2RTY4 2548 aa12.82□□□□□ -0.36
PHRF1-202ENST00000413872 LECT2O14960 151 aa12.82□□□□□ -0.36
PHRF1-202ENST00000413872 COX7BP24311 80 aa12.82□□□□□ -0.36
PHRF1-202ENST00000413872 C2CD3Q4AC94 2353 aa12.81□□□□□ -0.36
PHRF1-202ENST00000413872 PDE6GP18545 87 aa12.81□□□□□ -0.36
PHRF1-202ENST00000413872 CRIP1P50238 77 aa12.81□□□□□ -0.36
PHRF1-202ENST00000413872 NREPQ16612 68 aa12.81□□□□□ -0.36
PHRF1-202ENST00000413872 ZNF580Q9UK33 172 aa12.81□□□□□ -0.36
PHRF1-202ENST00000413872 KRTAP10-9P60411 292 aa12.81□□□□□ -0.36
PHRF1-202ENST00000413872 NFE4Q86UQ8 179 aa12.81□□□□□ -0.36
PHRF1-202ENST00000413872 PIK3CD-AS1Q5SR53 167 aa12.8□□□□□ -0.36
PHRF1-202ENST00000413872 Q6ZS46 218 aa12.8□□□□□ -0.36
PHRF1-202ENST00000413872 H3BT86 120 aa12.8□□□□□ -0.36
PHRF1-202ENST00000413872 TMEM256-PLSCR3K7ERE1 68 aa12.8□□□□□ -0.36
PHRF1-202ENST00000413872 IGLV4-3A0A075B6K6 122 aa12.79□□□□□ -0.36
PHRF1-202ENST00000413872 IGKV2-24A0A0C4DH68 120 aa12.79□□□□□ -0.36
PHRF1-202ENST00000413872 TRBV27A0A0K0K1C4 114 aa12.79□□□□□ -0.36
PHRF1-202ENST00000413872 DCANP1Q8TF63 244 aa12.79□□□□□ -0.36
PHRF1-202ENST00000413872 PYGO1Q9Y3Y4 419 aa12.79□□□□□ -0.36
PHRF1-202ENST00000413872 IGLV2-11P01706 119 aa12.78□□□□□ -0.36
PHRF1-202ENST00000413872 KIAA1549Q9HCM3 1950 aa12.78□□□□□ -0.36
PHRF1-202ENST00000413872 BRI3O95415 125 aa12.78□□□□□ -0.36
PHRF1-202ENST00000413872 A0A0J9YXY3 114 aa12.78□□□□□ -0.36
PHRF1-202ENST00000413872 IBA57-AS1B1ANH7 110 aa12.78□□□□□ -0.36
PHRF1-202ENST00000413872 MRGPRG-AS1Q2M3A8 158 aa12.78□□□□□ -0.36
PHRF1-202ENST00000413872 CDKN2A-AS1Q9UH64 79 aa12.78□□□□□ -0.36
PHRF1-202ENST00000413872 C18orf65Q6ZTR6 163 aa12.77□□□□□ -0.36
PHRF1-202ENST00000413872 TEN1Q86WV5 123 aa12.77□□□□□ -0.36
PHRF1-202ENST00000413872 PLXNB1O43157 2135 aa12.77□□□□□ -0.36
PHRF1-202ENST00000413872 U3KQK5 164 aa12.77□□□□□ -0.36
PHRF1-202ENST00000413872 RBM3P98179 157 aaKnown RBP12.76□□□□□ -0.37
PHRF1-202ENST00000413872 BBC3Q96PG8 261 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 325.9 ms