RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 TRAV13-2A0A0B4J235 113 aa1.36□□□□□ -2.19
HMGB3P31-201ENST00000413333 TRAV12-3A0A0B4J271 114 aa1.36□□□□□ -2.19
HMGB3P31-201ENST00000413333 A6NIN4 97 aa1.36□□□□□ -2.19
HMGB3P31-201ENST00000413333 SNCAP37840 140 aa1.36□□□□□ -2.19
HMGB3P31-201ENST00000413333 PYY3Q5JQD4 70 aa1.36□□□□□ -2.19
HMGB3P31-201ENST00000413333 MON2Q7Z3U7 1717 aa1.36□□□□□ -2.19
HMGB3P31-201ENST00000413333 LINC00474Q9P2X8 69 aa1.36□□□□□ -2.19
HMGB3P31-201ENST00000413333 ZFHX3Q15911 3703 aa1.36□□□□□ -2.19
HMGB3P31-201ENST00000413333 SHANK2Q9UPX8 1470 aa1.36□□□□□ -2.19
HMGB3P31-201ENST00000413333 ANKRD36BQ8N2N9 1353 aa1.35□□□□□ -2.19
HMGB3P31-201ENST00000413333 SETXQ7Z333 2677 aaKnown RBP1.35□□□□□ -2.19
HMGB3P31-201ENST00000413333 ZNF462Q96JM2 2506 aa1.35□□□□□ -2.19
HMGB3P31-201ENST00000413333 MED13LQ71F56 2210 aa1.35□□□□□ -2.19
HMGB3P31-201ENST00000413333 RGPD3A6NKT7 1758 aaPredicted RBP1.35□□□□□ -2.19
HMGB3P31-201ENST00000413333 HCG22E2RYF7 251 aa1.35□□□□□ -2.19
HMGB3P31-201ENST00000413333 SIX6O95475 246 aa1.35□□□□□ -2.19
HMGB3P31-201ENST00000413333 UBE2D1P51668 147 aa1.35□□□□□ -2.19
HMGB3P31-201ENST00000413333 DEFB132Q7Z7B7 95 aa1.35□□□□□ -2.19
HMGB3P31-201ENST00000413333 CYP4F30PQ9H0H9 118 aa1.35□□□□□ -2.19
HMGB3P31-201ENST00000413333 PLEKHH2Q8IVE3 1493 aa1.35□□□□□ -2.19
HMGB3P31-201ENST00000413333 ASCC3Q8N3C0 2202 aaKnown RBP1.35□□□□□ -2.19
HMGB3P31-201ENST00000413333 NAV2Q8IVL1 2488 aa1.34□□□□□ -2.19
HMGB3P31-201ENST00000413333 LOC285556D6RIA3 1793 aa1.34□□□□□ -2.19
HMGB3P31-201ENST00000413333 MAST4O15021 2626 aa1.34□□□□□ -2.19
HMGB3P31-201ENST00000413333 TRBV7-1A0A0A6YYK4 115 aa1.34□□□□□ -2.19
HMGB3P31-201ENST00000413333 ZNF818PQ6ZRF7 136 aa1.34□□□□□ -2.19
HMGB3P31-201ENST00000413333 LCN9Q8WX39 176 aa1.34□□□□□ -2.19
HMGB3P31-201ENST00000413333 GOLGA3Q08378 1498 aa1.34□□□□□ -2.19
HMGB3P31-201ENST00000413333 ARHGEF12Q9NZN5 1544 aa1.34□□□□□ -2.2
HMGB3P31-201ENST00000413333 COL4A6Q14031 1691 aa1.33□□□□□ -2.2
HMGB3P31-201ENST00000413333 ZDBF2Q9HCK1 2354 aa1.33□□□□□ -2.2
HMGB3P31-201ENST00000413333 hADV29S1A0JD25 119 aa1.33□□□□□ -2.2
HMGB3P31-201ENST00000413333 CLPSL1A2RUU4 121 aa1.33□□□□□ -2.2
HMGB3P31-201ENST00000413333 HIGD1CA8MV81 97 aa1.33□□□□□ -2.2
HMGB3P31-201ENST00000413333 GNGT2O14610 69 aa1.33□□□□□ -2.2
HMGB3P31-201ENST00000413333 PRO1933Q9H354 126 aa1.33□□□□□ -2.2
HMGB3P31-201ENST00000413333 NPVFQ9HCQ7 196 aa1.33□□□□□ -2.2
HMGB3P31-201ENST00000413333 SIPA1L3O60292 1781 aaPredicted RBP1.33□□□□□ -2.2
HMGB3P31-201ENST00000413333 A0A0C4DFX4 3053 aa1.33□□□□□ -2.2
HMGB3P31-201ENST00000413333 LRRC37A3O60309 1634 aa1.33□□□□□ -2.2
HMGB3P31-201ENST00000413333 ABCA1O95477 2261 aa1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 LAMA4Q16363 1823 aa1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 ANKRD11Q6UB99 2663 aaPredicted RBP1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 TRBV7-7A0A0K0K1E9 115 aa1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 NBDYA0A0U1RRE5 68 aa1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 TEX49A0A1B0GTD5 131 aa1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 ASIPP42127 132 aa1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 RPL37AP61513 92 aaKnown RBP1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 GNG11P61952 73 aa1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 CYP2G1PQ6ZSU1 146 aa1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 FAM213BQ8TBF2 198 aa1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 MYOZ3Q8TDC0 251 aa1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 TSLPQ969D9 159 aa1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 MYOM1P52179 1685 aa1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 BLMP54132 1417 aaPredicted RBP1.32□□□□□ -2.2
HMGB3P31-201ENST00000413333 MAGI2Q86UL8 1455 aa1.31□□□□□ -2.2
HMGB3P31-201ENST00000413333 DIP2CQ9Y2E4 1556 aa1.31□□□□□ -2.2
HMGB3P31-201ENST00000413333 TOP2BQ02880 1626 aa1.31□□□□□ -2.2
HMGB3P31-201ENST00000413333 LOC101927531A0A1B0GV80 90 aa1.31□□□□□ -2.2
HMGB3P31-201ENST00000413333 NAP1L6A6NFF2 107 aa1.31□□□□□ -2.2
HMGB3P31-201ENST00000413333 FXYD4P59646 89 aa1.31□□□□□ -2.2
HMGB3P31-201ENST00000413333 PMCHL2Q9BQD1 86 aa1.31□□□□□ -2.2
HMGB3P31-201ENST00000413333 PDE4DIPQ5VU43 2346 aa1.31□□□□□ -2.2
HMGB3P31-201ENST00000413333 TEP1Q99973 2627 aaKnown RBP1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 CLTCQ00610 1675 aaKnown RBP1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 ATOX1O00244 68 aa1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 CCL3L1P16619 93 aa1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 KRTDAPP60985 99 aa1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 SEC11AP67812 179 aa1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 Q8N6K4 173 aa1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 FAM167A-AS1Q96KT0 104 aa1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 CRCT1Q9UGL9 99 aa1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 ABCA2Q9BZC7 2435 aa1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 CEP162Q5TB80 1403 aa1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 ANKRD17O75179 2603 aaKnown RBP1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 ARHGEF5Q12774 1597 aa1.3□□□□□ -2.2
HMGB3P31-201ENST00000413333 UBR1Q8IWV7 1749 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 TRBV7-3A0A075B6L6 115 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 SFT2D2O95562 160 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 GYPAP02724 150 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 UBE2D3P61077 147 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 UBE2D2P62837 147 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 FXYD3Q14802 87 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 ZNF56Q15929 161 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 Q5VV11 94 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 LINC00575Q6W349 94 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 C20orf197Q8N268 126 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 DOPEY1Q5JWR5 2465 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 MAP3K1Q13233 1512 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 ITPR3Q14573 2671 aa1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 MAP2P11137 1827 aaKnown RBP1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 PDCD11Q14690 1871 aaKnown RBP1.29□□□□□ -2.2
HMGB3P31-201ENST00000413333 MYO7BQ6PIF6 2116 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 FLNBO75369 2602 aaKnown RBP1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 CRYM-AS1A6NIL9 109 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 H3BQF6 201 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 K7EP34 96 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 C10orf128Q5T292 105 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 XAF1Q6GPH4 301 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 Q86TA4 180 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms