RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 ABCC3O15438 1527 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 PXDNQ92626 1479 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 NINQ8N4C6 2090 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 TENM3Q9P273 2699 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 TRBV7-3A0A075B6L6 115 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 NAP1L6A6NFF2 107 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 HIGD1CA8MV81 97 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 ATOX1O00244 68 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 NMBP08949 121 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 KRTDAPP60985 99 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 TDRG1Q3Y452 100 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 C10orf128Q5T292 105 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 C20orf197Q8N268 126 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 C20orf78Q9BR46 151 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 BET1LQ9NYM9 111 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 SIP14410 1827 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 ZNF142P52746 1687 aaPredicted RBP1□□□□□ -2.25
PTPN12-202ENST00000407343 KDM6BO15054 1643 aa1□□□□□ -2.25
PTPN12-202ENST00000407343 KDM5DQ9BY66 1539 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 CHD1O14646 1710 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 IGLV3-32A0A0A0MS00 114 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 CRYM-AS1A6NIL9 109 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 SFT2D2O95562 160 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 GYPAP02724 150 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 CCL3L1P16619 93 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 UBE2D3P61077 147 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 UBE2D2P62837 147 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 FXYD3Q14802 87 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 SPATA45Q537H7 98 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 Q5VV11 94 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 SERP2Q8N6R1 65 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 SPAG17Q6Q759 2223 aa0.99□□□□□ -2.25
PTPN12-202ENST00000407343 TET3O43151 1660 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 CNTRLQ7Z7A1 2325 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 ABCA4P78363 2273 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 A0A087WTM6 91 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 TRAV22A0A0B4J277 110 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 TRAPPC2P0DI81 140 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 TRAPPC2BP0DI82 140 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 FAUP35544 74 aaKnown RBP0.98□□□□□ -2.25
PTPN12-202ENST00000407343 FXYD4P59646 89 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 ZNF56Q15929 161 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 C5orf56Q8N8D9 126 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 FAM167A-AS1Q96KT0 104 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 BPESC1Q9GZL8 116 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 NDUFA4L2Q9NRX3 87 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 CACFD1Q9UGQ2 172 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 ARHGEF12Q9NZN5 1544 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 PATJQ8NI35 1801 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 MYO18AQ92614 2054 aaKnown RBP0.98□□□□□ -2.25
PTPN12-202ENST00000407343 MAGI2Q86UL8 1455 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 MON2Q7Z3U7 1717 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 NWD2Q9ULI1 1742 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 BLMP54132 1417 aaPredicted RBP0.98□□□□□ -2.25
PTPN12-202ENST00000407343 CEP162Q5TB80 1403 aa0.98□□□□□ -2.25
PTPN12-202ENST00000407343 PTPRDP23468 1912 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 PHRF1Q9P1Y6 1649 aaKnown RBP0.97□□□□□ -2.25
PTPN12-202ENST00000407343 DOCK1Q14185 1865 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 TET1Q8NFU7 2136 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 SBF2Q86WG5 1849 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 C10orf142B7Z368 130 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 SYS1-DBNDD2H3BUS1 97 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 H7BZZ5 65 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 NDUFC1O43677 76 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 APOC3P02656 99 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 SSBP1Q04837 148 aaKnown RBP0.97□□□□□ -2.25
PTPN12-202ENST00000407343 PEA15Q15121 130 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 XAF1Q6GPH4 301 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 COX7B2Q8TF08 81 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 LINC00208Q96KT6 92 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 TRGV9Q99603 122 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 MGST2Q99735 147 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 MANBALQ9NQG1 85 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 CDC42SE2Q9NRR3 84 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 MAP3K1Q13233 1512 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 DLEC1Q9Y238 1755 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 MLH3Q9UHC1 1453 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 COL4A6Q14031 1691 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 UACAQ9BZF9 1416 aa0.97□□□□□ -2.25
PTPN12-202ENST00000407343 WNK3Q9BYP7 1800 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 MYH8P13535 1937 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 A0A0G2JND7 137 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 CHKB-CPT1BH3BT56 60 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 CYB5AP00167 134 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 EDDM3BP56851 147 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 ELOF1P60002 83 aaKnown RBP0.96□□□□□ -2.26
PTPN12-202ENST00000407343 VMO1Q7Z5L0 202 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 ZGRF1Q86YA3 2104 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 S100A16Q96FQ6 103 aaKnown RBP0.96□□□□□ -2.26
PTPN12-202ENST00000407343 PRO1854Q9UHT4 67 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 LENEPQ9Y5L5 61 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 MRC1P22897 1456 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 ERVK-7P63135 1459 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 RREB1Q92766 1687 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 PLIN4Q96Q06 1357 aa0.96□□□□□ -2.26
PTPN12-202ENST00000407343 NRXN2Q9P2S2 1712 aa0.95□□□□□ -2.26
PTPN12-202ENST00000407343 EPRSP07814 1512 aaKnown RBP0.95□□□□□ -2.26
PTPN12-202ENST00000407343 CDK13Q14004 1512 aaKnown RBP0.95□□□□□ -2.26
PTPN12-202ENST00000407343 DCAF1Q9Y4B6 1507 aa0.95□□□□□ -2.26
PTPN12-202ENST00000407343 NRXN1Q9ULB1 1477 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms