RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 TMEM97Q5BJF2 176 aa6.29□□□□□ -1.4
NIFKP1-201ENST00000398317 DGAT2L7PQ6IED9 249 aa6.29□□□□□ -1.4
NIFKP1-201ENST00000398317 C9orf163Q8N9P6 203 aa6.29□□□□□ -1.4
NIFKP1-201ENST00000398317 AP1S3Q96PC3 154 aa6.29□□□□□ -1.4
NIFKP1-201ENST00000398317 TPPP3Q9BW30 176 aa6.29□□□□□ -1.4
NIFKP1-201ENST00000398317 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
NIFKP1-201ENST00000398317 IGHV1-24A0A0C4DH33 117 aa6.28□□□□□ -1.4
NIFKP1-201ENST00000398317 UMAD1C9J7I0 102 aa6.28□□□□□ -1.4
NIFKP1-201ENST00000398317 CCL20P78556 96 aa6.28□□□□□ -1.4
NIFKP1-201ENST00000398317 ZNF345Q14585 488 aa6.28□□□□□ -1.4
NIFKP1-201ENST00000398317 IQCJQ1A5X6 159 aa6.28□□□□□ -1.4
NIFKP1-201ENST00000398317 SUMO4Q6EEV6 95 aa6.28□□□□□ -1.4
NIFKP1-201ENST00000398317 hDV102S1A0JD36 115 aa6.27□□□□□ -1.41
NIFKP1-201ENST00000398317 M0QY20 66 aa6.27□□□□□ -1.41
NIFKP1-201ENST00000398317 RAB5CP51148 216 aa6.27□□□□□ -1.41
NIFKP1-201ENST00000398317 NKX2-5P52952 324 aaPredicted RBP6.27□□□□□ -1.41
NIFKP1-201ENST00000398317 REG3AQ06141 175 aa6.27□□□□□ -1.41
NIFKP1-201ENST00000398317 RGS21Q2M5E4 152 aa6.27□□□□□ -1.41
NIFKP1-201ENST00000398317 SDIM1Q6ZPB5 146 aa6.27□□□□□ -1.41
NIFKP1-201ENST00000398317 FER1L6-AS1Q8NA97 138 aa6.27□□□□□ -1.41
NIFKP1-201ENST00000398317 C20orf203Q8NBC4 194 aa6.27□□□□□ -1.41
NIFKP1-201ENST00000398317 GFRA4Q9GZZ7 299 aa6.27□□□□□ -1.41
NIFKP1-201ENST00000398317 GNG13Q9P2W3 67 aa6.27□□□□□ -1.41
NIFKP1-201ENST00000398317 IGLV4-60A0A075B6I1 120 aa6.26□□□□□ -1.41
NIFKP1-201ENST00000398317 KANTRA0A1W2PQU2 76 aa6.26□□□□□ -1.41
NIFKP1-201ENST00000398317 BCL2L11O43521 198 aa6.26□□□□□ -1.41
NIFKP1-201ENST00000398317 IGLC6P0CF74 106 aa6.26□□□□□ -1.41
NIFKP1-201ENST00000398317 CENPWQ5EE01 88 aa6.26□□□□□ -1.41
NIFKP1-201ENST00000398317 OR2D3Q8NGH3 330 aa6.26□□□□□ -1.41
NIFKP1-201ENST00000398317 TMEM243Q9BU79 118 aa6.26□□□□□ -1.41
NIFKP1-201ENST00000398317 A0A0D9SG52 128 aa6.25□□□□□ -1.41
NIFKP1-201ENST00000398317 RAB19A4D1S5 217 aa6.25□□□□□ -1.41
NIFKP1-201ENST00000398317 HMSDA8MTL9 139 aa6.25□□□□□ -1.41
NIFKP1-201ENST00000398317 H7C1H1 209 aa6.25□□□□□ -1.41
NIFKP1-201ENST00000398317 C11orf52Q96A22 123 aa6.25□□□□□ -1.41
NIFKP1-201ENST00000398317 DPH3Q96FX2 82 aa6.25□□□□□ -1.41
NIFKP1-201ENST00000398317 MANBALQ9NQG1 85 aa6.25□□□□□ -1.41
NIFKP1-201ENST00000398317 TNXBP22105 4242 aa6.25□□□□□ -1.41
NIFKP1-201ENST00000398317 TRAV8-4A0A0B4J246 113 aa6.24□□□□□ -1.41
NIFKP1-201ENST00000398317 C19orf71A6NCJ1 209 aa6.24□□□□□ -1.41
NIFKP1-201ENST00000398317 P01737 135 aa6.24□□□□□ -1.41
NIFKP1-201ENST00000398317 CHTF8P0CG12 524 aa6.24□□□□□ -1.41
NIFKP1-201ENST00000398317 RPS20P60866 119 aaKnown RBP6.24□□□□□ -1.41
NIFKP1-201ENST00000398317 CNBPP62633 177 aaKnown RBP6.24□□□□□ -1.41
NIFKP1-201ENST00000398317 CACNG7P62955 275 aa6.24□□□□□ -1.41
NIFKP1-201ENST00000398317 RASL11AQ6T310 242 aa6.24□□□□□ -1.41
NIFKP1-201ENST00000398317 LYZL1Q6UWQ5 148 aa6.24□□□□□ -1.41
NIFKP1-201ENST00000398317 IGHV3-64A0A075B6Q5 118 aa6.23□□□□□ -1.41
NIFKP1-201ENST00000398317 A0A1B0GUV1 79 aa6.23□□□□□ -1.41
NIFKP1-201ENST00000398317 UBE2L6O14933 153 aa6.23□□□□□ -1.41
NIFKP1-201ENST00000398317 MT1HL1P0DM35 61 aa6.23□□□□□ -1.41
NIFKP1-201ENST00000398317 GNG4P50150 75 aa6.23□□□□□ -1.41
NIFKP1-201ENST00000398317 EIF5AP63241 154 aaKnown RBP6.23□□□□□ -1.41
NIFKP1-201ENST00000398317 CIRBPQ14011 172 aaKnown RBP6.23□□□□□ -1.41
NIFKP1-201ENST00000398317 NIT2Q9NQR4 276 aa6.23□□□□□ -1.41
NIFKP1-201ENST00000398317 A0A087WYN8 130 aa6.22□□□□□ -1.41
NIFKP1-201ENST00000398317 IGKV3OR2-268A0A0C4DH90 116 aa6.22□□□□□ -1.41
NIFKP1-201ENST00000398317 F2Z2F3 143 aa6.22□□□□□ -1.41
NIFKP1-201ENST00000398317 IFNA1P01562 189 aa6.22□□□□□ -1.41
NIFKP1-201ENST00000398317 TRGC1P0CF51 173 aa6.22□□□□□ -1.41
NIFKP1-201ENST00000398317 NTF3P20783 257 aa6.22□□□□□ -1.41
NIFKP1-201ENST00000398317 MALP21145 153 aa6.22□□□□□ -1.41
NIFKP1-201ENST00000398317 PGLYRP4Q96LB8 373 aa6.22□□□□□ -1.41
NIFKP1-201ENST00000398317 DPH3P1Q9H4G8 78 aa6.22□□□□□ -1.41
NIFKP1-201ENST00000398317 TRBV20OR9-2A0A075B6H5 130 aa6.21□□□□□ -1.42
NIFKP1-201ENST00000398317 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.21□□□□□ -1.42
NIFKP1-201ENST00000398317 TRAV1-1A0A0B4J248 108 aa6.21□□□□□ -1.42
NIFKP1-201ENST00000398317 XKRY2A2RUG3 117 aa6.21□□□□□ -1.42
NIFKP1-201ENST00000398317 AMTP48728 403 aa6.21□□□□□ -1.42
NIFKP1-201ENST00000398317 SULT1A2P50226 295 aa6.21□□□□□ -1.42
NIFKP1-201ENST00000398317 COTL1Q14019 142 aa6.21□□□□□ -1.42
NIFKP1-201ENST00000398317 WDR73Q6P4I2 378 aa6.21□□□□□ -1.42
NIFKP1-201ENST00000398317 Q6ZNX1 250 aa6.21□□□□□ -1.42
NIFKP1-201ENST00000398317 Q6ZRU5 148 aa6.21□□□□□ -1.42
NIFKP1-201ENST00000398317 SPACA4Q8TDM5 124 aa6.21□□□□□ -1.42
NIFKP1-201ENST00000398317 MED9Q9NWA0 146 aa6.21□□□□□ -1.42
NIFKP1-201ENST00000398317 TRAV26-2A0A0B4J265 109 aa6.2□□□□□ -1.42
NIFKP1-201ENST00000398317 MEF2BQ02080 365 aaPredicted RBP6.2□□□□□ -1.42
NIFKP1-201ENST00000398317 TWIST1Q15672 202 aa6.2□□□□□ -1.42
NIFKP1-201ENST00000398317 HIGD2BQ4VC39 106 aa6.2□□□□□ -1.42
NIFKP1-201ENST00000398317 C15orf56Q8N910 161 aa6.2□□□□□ -1.42
NIFKP1-201ENST00000398317 GATD1Q8NB37 220 aa6.2□□□□□ -1.42
NIFKP1-201ENST00000398317 SMIM12Q96EX1 92 aa6.2□□□□□ -1.42
NIFKP1-201ENST00000398317 RNF185Q96GF1 192 aa6.2□□□□□ -1.42
NIFKP1-201ENST00000398317 TEX46H3BTG2 121 aa6.19□□□□□ -1.42
NIFKP1-201ENST00000398317 PHOX2AO14813 284 aa6.19□□□□□ -1.42
NIFKP1-201ENST00000398317 PDE6DO43924 150 aa6.19□□□□□ -1.42
NIFKP1-201ENST00000398317 CTRLP40313 264 aa6.19□□□□□ -1.42
NIFKP1-201ENST00000398317 COX6A2Q02221 97 aa6.19□□□□□ -1.42
NIFKP1-201ENST00000398317 C9orf62Q8N4C0 152 aa6.19□□□□□ -1.42
NIFKP1-201ENST00000398317 RPL39LQ96EH5 51 aaKnown RBP6.19□□□□□ -1.42
NIFKP1-201ENST00000398317 RNASE7Q9H1E1 156 aaKnown RBP6.19□□□□□ -1.42
NIFKP1-201ENST00000398317 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.18□□□□□ -1.42
NIFKP1-201ENST00000398317 IGKV2-24A0A0C4DH68 120 aa6.18□□□□□ -1.42
NIFKP1-201ENST00000398317 IGKV2-29A2NJV5 120 aaPredicted RBP6.18□□□□□ -1.42
NIFKP1-201ENST00000398317 BCL2P10415 239 aa6.18□□□□□ -1.42
NIFKP1-201ENST00000398317 RPS10P46783 165 aaKnown RBP6.18□□□□□ -1.42
NIFKP1-201ENST00000398317 FOXA3P55318 350 aaPredicted RBP6.18□□□□□ -1.42
NIFKP1-201ENST00000398317 MAJINQ3KP22 176 aa6.18□□□□□ -1.42
NIFKP1-201ENST00000398317 RNASEKQ6P5S7 137 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms