RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 HSPB8Q9UJY1 196 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 LAMTOR2Q9Y2Q5 125 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 PHLDA3Q9Y5J5 127 aa3.27□□□□□ -1.89
AP3S1-202ENST00000395548 A0A1B0GW54 56 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 LECT2O14960 151 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 RBFOX2O43251 390 aaKnown RBP eCLIP3.26□□□□□ -1.89
AP3S1-202ENST00000395548 NAPSAO96009 420 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 SAA1P0DJI8 122 aaPredicted RBP3.26□□□□□ -1.89
AP3S1-202ENST00000395548 CRYGAP11844 174 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 NPPCP23582 126 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 TGFBR1P36897 503 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 WFDC2Q14508 124 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 HMGN3Q15651 99 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 KRTAP13-3Q3SY46 172 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 WFDC10BQ8IUB3 73 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 OR5A1Q8NGJ0 315 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 OR5D14Q8NGL3 314 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 OR10AC1Q8NH08 325 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 TTTY10Q9BZA0 68 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 GABARAPL1Q9H0R8 117 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 SLC35B3Q9H1N7 401 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 EFCAB1Q9HAE3 211 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 KIF25-AS1Q9Y6Z4 181 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
AP3S1-202ENST00000395548 USH2AO75445 5202 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 TMEM14DPA8MWL7 114 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 UBE2L6O14933 153 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 PITX3O75364 302 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 UBBP0CG47 229 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 HIST1H2BOP23527 126 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 HIST1H2BBP33778 126 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 ETV6P41212 452 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 LPAR6P43657 344 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 RPS10P46783 165 aaKnown RBP3.25□□□□□ -1.89
AP3S1-202ENST00000395548 HIST1H2BDP58876 126 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 GNG11P61952 73 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 HIST1H2BCP62807 126 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 HIST2H2BEQ16778 126 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.25□□□□□ -1.89
AP3S1-202ENST00000395548 FOXI2Q6ZQN5 318 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 OR10D4PQ8NGN7 298 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 CANT1Q8WVQ1 401 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 HIST1H2BHQ93079 126 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 HIST1H2BNQ99877 126 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 HIST1H2BMQ99879 126 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 NOP10Q9NPE3 64 aaKnown RBP3.25□□□□□ -1.89
AP3S1-202ENST00000395548 NEBP20929 6669 aa3.25□□□□□ -1.89
AP3S1-202ENST00000395548 E7EUB6 86 aa3.24□□□□□ -1.89
AP3S1-202ENST00000395548 ZNF670-ZNF695F2Z2N8 137 aa3.24□□□□□ -1.89
AP3S1-202ENST00000395548 F8W036 122 aa3.24□□□□□ -1.89
AP3S1-202ENST00000395548 KRTAP1-4P0C5Y4 121 aa3.24□□□□□ -1.89
AP3S1-202ENST00000395548 RPS11P62280 158 aaKnown RBP eCLIP3.24□□□□□ -1.89
AP3S1-202ENST00000395548 ZNF79Q15937 498 aa3.24□□□□□ -1.89
AP3S1-202ENST00000395548 PRSS54Q6PEW0 395 aa3.24□□□□□ -1.89
AP3S1-202ENST00000395548 AMTNQ6UX39 209 aa3.24□□□□□ -1.89
AP3S1-202ENST00000395548 DAND5Q8N907 189 aa3.24□□□□□ -1.89
AP3S1-202ENST00000395548 C2orf88Q9BSF0 95 aa3.24□□□□□ -1.89
AP3S1-202ENST00000395548 NDFIP1Q9BT67 221 aa3.24□□□□□ -1.89
AP3S1-202ENST00000395548 OR2D2Q9H210 308 aa3.24□□□□□ -1.89
AP3S1-202ENST00000395548 TRBV6-6A0A0A6YYG2 114 aa3.23□□□□□ -1.89
AP3S1-202ENST00000395548 LINC00869P0C866 280 aa3.23□□□□□ -1.89
AP3S1-202ENST00000395548 NTF3P20783 257 aa3.23□□□□□ -1.89
AP3S1-202ENST00000395548 CSN1S1P47710 185 aa3.23□□□□□ -1.89
AP3S1-202ENST00000395548 CNBPP62633 177 aaKnown RBP3.23□□□□□ -1.89
AP3S1-202ENST00000395548 RPL30P62888 115 aaKnown RBP3.23□□□□□ -1.89
AP3S1-202ENST00000395548 LINC01556Q5JQF7 62 aa3.23□□□□□ -1.89
AP3S1-202ENST00000395548 RPL22L1Q6P5R6 122 aaKnown RBP3.23□□□□□ -1.89
AP3S1-202ENST00000395548 SLC25A34Q6PIV7 304 aa3.23□□□□□ -1.89
AP3S1-202ENST00000395548 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
AP3S1-202ENST00000395548 PACRGLQ8N7B6 248 aa3.23□□□□□ -1.89
AP3S1-202ENST00000395548 TMEM229BQ8NBD8 167 aa3.23□□□□□ -1.89
AP3S1-202ENST00000395548 DPH3Q96FX2 82 aa3.23□□□□□ -1.89
AP3S1-202ENST00000395548 A6NED7 52 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 CCDC160A6NGH7 325 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 PHOX2AO14813 284 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 GNG7O60262 68 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 SHBGP04278 402 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 PRM2P04554 102 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 BCL2P10415 239 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 CCL20P78556 96 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 MRPL51Q4U2R6 128 aaKnown RBP3.22□□□□□ -1.89
AP3S1-202ENST00000395548 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 GDF5OSQ5U4N7 250 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 LCA10Q71F78 164 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 OR8I2Q8N0Y5 310 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 ATP6V0E2Q8NHE4 81 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 HIST1H2BAQ96A08 127 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 CKLFQ9UBR5 152 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 FUT9Q9Y231 359 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 TRAPPC1Q9Y5R8 145 aa3.22□□□□□ -1.89
AP3S1-202ENST00000395548 TRDV1A0A1B0GX56 115 aa3.21□□□□□ -1.9
AP3S1-202ENST00000395548 IGLC7A0M8Q6 106 aa3.21□□□□□ -1.9
AP3S1-202ENST00000395548 A8MWP4 228 aa3.21□□□□□ -1.9
AP3S1-202ENST00000395548 DLEU1O43261 78 aa3.21□□□□□ -1.9
AP3S1-202ENST00000395548 ZNF73O43830 326 aaPredicted RBP3.21□□□□□ -1.9
AP3S1-202ENST00000395548 IGKV1-5P01602 117 aa3.21□□□□□ -1.9
AP3S1-202ENST00000395548 HTR1AP08908 422 aa3.21□□□□□ -1.9
AP3S1-202ENST00000395548 S100PP25815 95 aa3.21□□□□□ -1.9
AP3S1-202ENST00000395548 S100A4P26447 101 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms