RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 KRTAP4-9Q9BYQ8 210 aa8.79□□□□□ -1
SCAF11-203ENST00000395453 IGHV1-24A0A0C4DH33 117 aa8.78□□□□□ -1
SCAF11-203ENST00000395453 MGPP08493 103 aa8.78□□□□□ -1
SCAF11-203ENST00000395453 NTF3P20783 257 aa8.78□□□□□ -1
SCAF11-203ENST00000395453 GAGE6Q13070 117 aa8.78□□□□□ -1
SCAF11-203ENST00000395453 LINC00269Q8N2A0 174 aa8.78□□□□□ -1
SCAF11-203ENST00000395453 NUDT10Q8NFP7 164 aa8.78□□□□□ -1
SCAF11-203ENST00000395453 NUDT11Q96G61 164 aa8.78□□□□□ -1
SCAF11-203ENST00000395453 CNFNQ9BYD5 112 aa8.78□□□□□ -1
SCAF11-203ENST00000395453 FAT3Q8TDW7 4589 aa8.77□□□□□ -1.01
SCAF11-203ENST00000395453 USP17L23D6RBM5 183 aa8.77□□□□□ -1.01
SCAF11-203ENST00000395453 TRGC1P0CF51 173 aa8.77□□□□□ -1.01
SCAF11-203ENST00000395453 CTRLP40313 264 aa8.77□□□□□ -1.01
SCAF11-203ENST00000395453 RASL11AQ6T310 242 aa8.77□□□□□ -1.01
SCAF11-203ENST00000395453 Q6ZNX1 250 aa8.77□□□□□ -1.01
SCAF11-203ENST00000395453 CIRBP-AS1Q8TBR5 109 aa8.77□□□□□ -1.01
SCAF11-203ENST00000395453 NIT2Q9NQR4 276 aa8.77□□□□□ -1.01
SCAF11-203ENST00000395453 A0A1B0GUV1 79 aa8.76□□□□□ -1.01
SCAF11-203ENST00000395453 PRSS1P07477 247 aa8.76□□□□□ -1.01
SCAF11-203ENST00000395453 NKX2-5P52952 324 aaPredicted RBP8.76□□□□□ -1.01
SCAF11-203ENST00000395453 KRTAP10-4P60372 401 aaPredicted RBP8.76□□□□□ -1.01
SCAF11-203ENST00000395453 DGAT2L7PQ6IED9 249 aa8.76□□□□□ -1.01
SCAF11-203ENST00000395453 OCC1Q8TAD7 63 aa8.76□□□□□ -1.01
SCAF11-203ENST00000395453 PGLYRP4Q96LB8 373 aa8.76□□□□□ -1.01
SCAF11-203ENST00000395453 DPH3P1Q9H4G8 78 aa8.76□□□□□ -1.01
SCAF11-203ENST00000395453 K7EN84 100 aa8.75□□□□□ -1.01
SCAF11-203ENST00000395453 C20orf203Q8NBC4 194 aa8.75□□□□□ -1.01
SCAF11-203ENST00000395453 HLA-DQA1P01909 254 aa8.74□□□□□ -1.01
SCAF11-203ENST00000395453 REG3AQ06141 175 aa8.74□□□□□ -1.01
SCAF11-203ENST00000395453 CLPSL2Q6UWE3 100 aa8.74□□□□□ -1.01
SCAF11-203ENST00000395453 TMEM243Q9BU79 118 aa8.74□□□□□ -1.01
SCAF11-203ENST00000395453 RNASE7Q9H1E1 156 aaKnown RBP8.74□□□□□ -1.01
SCAF11-203ENST00000395453 IGLV4-60A0A075B6I1 120 aa8.73□□□□□ -1.01
SCAF11-203ENST00000395453 TRAV8-4A0A0B4J246 113 aa8.73□□□□□ -1.01
SCAF11-203ENST00000395453 TWIST1Q15672 202 aa8.73□□□□□ -1.01
SCAF11-203ENST00000395453 C9orf163Q8N9P6 203 aa8.73□□□□□ -1.01
SCAF11-203ENST00000395453 LYPD6BQ8NI32 183 aa8.73□□□□□ -1.01
SCAF11-203ENST00000395453 RPP21Q9H633 154 aaKnown RBP8.73□□□□□ -1.01
SCAF11-203ENST00000395453 TMEM250H0YL14 139 aa8.72□□□□□ -1.01
SCAF11-203ENST00000395453 GATD1Q8NB37 220 aa8.72□□□□□ -1.01
SCAF11-203ENST00000395453 CLRN3Q8NCR9 226 aa8.72□□□□□ -1.01
SCAF11-203ENST00000395453 GTSF1Q8WW33 167 aa8.72□□□□□ -1.01
SCAF11-203ENST00000395453 GFRA4Q9GZZ7 299 aa8.72□□□□□ -1.01
SCAF11-203ENST00000395453 BLOC1S1P78537 153 aa8.71□□□□□ -1.02
SCAF11-203ENST00000395453 IGLV10-54A0A075B6I4 117 aa8.7□□□□□ -1.02
SCAF11-203ENST00000395453 COTL1Q14019 142 aa8.7□□□□□ -1.02
SCAF11-203ENST00000395453 ALKAL2Q6UX46 152 aa8.7□□□□□ -1.02
SCAF11-203ENST00000395453 SDIM1Q6ZPB5 146 aa8.7□□□□□ -1.02
SCAF11-203ENST00000395453 FAM231DQ6ZW35 169 aa8.7□□□□□ -1.02
SCAF11-203ENST00000395453 AKAP14Q86UN6 197 aa8.7□□□□□ -1.02
SCAF11-203ENST00000395453 RNF213Q63HN8 5207 aa8.69□□□□□ -1.02
SCAF11-203ENST00000395453 TRAV26-2A0A0B4J265 109 aa8.69□□□□□ -1.02
SCAF11-203ENST00000395453 FOXA3P55318 350 aaPredicted RBP8.69□□□□□ -1.02
SCAF11-203ENST00000395453 CNBPP62633 177 aaKnown RBP8.69□□□□□ -1.02
SCAF11-203ENST00000395453 NDUFS6O75380 124 aaKnown RBP8.68□□□□□ -1.02
SCAF11-203ENST00000395453 AMTP48728 403 aa8.68□□□□□ -1.02
SCAF11-203ENST00000395453 A8MWL6 223 aa8.67□□□□□ -1.02
SCAF11-203ENST00000395453 UBE2L6O14933 153 aa8.67□□□□□ -1.02
SCAF11-203ENST00000395453 GATCO43716 136 aaKnown RBP8.67□□□□□ -1.02
SCAF11-203ENST00000395453 SLPIP03973 132 aa8.67□□□□□ -1.02
SCAF11-203ENST00000395453 TEX261Q6UWH6 196 aa8.67□□□□□ -1.02
SCAF11-203ENST00000395453 RPL39LQ96EH5 51 aaKnown RBP8.67□□□□□ -1.02
SCAF11-203ENST00000395453 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.67□□□□□ -1.02
SCAF11-203ENST00000395453 PANO1I0J062 215 aa8.66□□□□□ -1.02
SCAF11-203ENST00000395453 NCR2O95944 276 aa8.66□□□□□ -1.02
SCAF11-203ENST00000395453 CT83Q5H943 113 aa8.66□□□□□ -1.02
SCAF11-203ENST00000395453 SMIM15Q7Z3B0 74 aa8.66□□□□□ -1.02
SCAF11-203ENST00000395453 hDV102S1A0JD36 115 aa8.65□□□□□ -1.02
SCAF11-203ENST00000395453 H7C423 109 aa8.65□□□□□ -1.02
SCAF11-203ENST00000395453 CIRBPQ14011 172 aaKnown RBP8.65□□□□□ -1.02
SCAF11-203ENST00000395453 LRP2P98164 4655 aa8.65□□□□□ -1.02
SCAF11-203ENST00000395453 PKHD1L1Q86WI1 4243 aa8.64□□□□□ -1.03
SCAF11-203ENST00000395453 TRBV6-5A0A0K0K1A5 114 aa8.64□□□□□ -1.03
SCAF11-203ENST00000395453 SDHAF1A6NFY7 115 aa8.64□□□□□ -1.03
SCAF11-203ENST00000395453 hCG_2014768A0A024R1R8 64 aa8.63□□□□□ -1.03
SCAF11-203ENST00000395453 FAM231BA6NCW3 169 aa8.63□□□□□ -1.03
SCAF11-203ENST00000395453 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
SCAF11-203ENST00000395453 LINC01551Q86U37 167 aa8.63□□□□□ -1.03
SCAF11-203ENST00000395453 FAM210AQ96ND0 272 aa8.63□□□□□ -1.03
SCAF11-203ENST00000395453 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.62□□□□□ -1.03
SCAF11-203ENST00000395453 GAGE12HA6NDE8 117 aa8.62□□□□□ -1.03
SCAF11-203ENST00000395453 CEBPGP53567 150 aa8.62□□□□□ -1.03
SCAF11-203ENST00000395453 C15orf56Q8N910 161 aa8.62□□□□□ -1.03
SCAF11-203ENST00000395453 TSKUQ8WUA8 353 aa8.62□□□□□ -1.03
SCAF11-203ENST00000395453 SMIM7Q9BQ49 75 aa8.62□□□□□ -1.03
SCAF11-203ENST00000395453 KRTAP4-2Q9BYR5 136 aa8.62□□□□□ -1.03
SCAF11-203ENST00000395453 EIF5A2Q9GZV4 153 aaKnown RBP8.62□□□□□ -1.03
SCAF11-203ENST00000395453 OSTCQ9NRP0 149 aa8.62□□□□□ -1.03
SCAF11-203ENST00000395453 AP5S1Q9NUS5 200 aa8.62□□□□□ -1.03
SCAF11-203ENST00000395453 IGHV3-64A0A075B6Q5 118 aa8.61□□□□□ -1.03
SCAF11-203ENST00000395453 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.61□□□□□ -1.03
SCAF11-203ENST00000395453 A0A1B0GUT8 65 aa8.61□□□□□ -1.03
SCAF11-203ENST00000395453 IGKV2-29A2NJV5 120 aaPredicted RBP8.61□□□□□ -1.03
SCAF11-203ENST00000395453 I3L3M4 83 aa8.61□□□□□ -1.03
SCAF11-203ENST00000395453 EIF4EBP3O60516 100 aaPredicted RBP8.61□□□□□ -1.03
SCAF11-203ENST00000395453 GAS8-AS1O95177 125 aa8.61□□□□□ -1.03
SCAF11-203ENST00000395453 APCSP02743 223 aa8.61□□□□□ -1.03
SCAF11-203ENST00000395453 SRP19P09132 144 aaKnown RBP8.61□□□□□ -1.03
SCAF11-203ENST00000395453 MT1HL1P0DM35 61 aa8.61□□□□□ -1.03
SCAF11-203ENST00000395453 FGF6P10767 208 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms