RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 J3QKU1 62 aa10.45□□□□□ -0.74
COL6A1-201ENST00000361866 IGHG2P01859 326 aa10.45□□□□□ -0.74
COL6A1-201ENST00000361866 PRM2P04554 102 aa10.45□□□□□ -0.74
COL6A1-201ENST00000361866 RNASE3P12724 160 aaKnown RBP10.45□□□□□ -0.74
COL6A1-201ENST00000361866 PIFOQ8TCI5 191 aa10.45□□□□□ -0.74
COL6A1-201ENST00000361866 IGHV4OR15-8A0A075B7B6 117 aa10.45□□□□□ -0.74
COL6A1-201ENST00000361866 A0A087WW49 117 aa10.45□□□□□ -0.74
COL6A1-201ENST00000361866 C10orf99Q6UWK7 81 aa10.45□□□□□ -0.74
COL6A1-201ENST00000361866 ACANP16112 2415 aa10.44□□□□□ -0.74
COL6A1-201ENST00000361866 CLPSL1A2RUU4 121 aa10.44□□□□□ -0.74
COL6A1-201ENST00000361866 LINC01619G3V211 115 aa10.44□□□□□ -0.74
COL6A1-201ENST00000361866 H3BUA1 57 aa10.44□□□□□ -0.74
COL6A1-201ENST00000361866 XGP55808 180 aa10.44□□□□□ -0.74
COL6A1-201ENST00000361866 PROK1P58294 105 aa10.44□□□□□ -0.74
COL6A1-201ENST00000361866 CNFNQ9BYD5 112 aa10.44□□□□□ -0.74
COL6A1-201ENST00000361866 A0A0J9YXY3 114 aa10.44□□□□□ -0.74
COL6A1-201ENST00000361866 HERVK_113P63121 156 aa10.44□□□□□ -0.74
COL6A1-201ENST00000361866 EBI3Q14213 229 aa10.44□□□□□ -0.74
COL6A1-201ENST00000361866 A0A0J9YX75 114 aa10.44□□□□□ -0.74
COL6A1-201ENST00000361866 C5orf38Q86SI9 138 aa10.44□□□□□ -0.74
COL6A1-201ENST00000361866 CFAP126Q5VTH2 177 aa10.43□□□□□ -0.74
COL6A1-201ENST00000361866 TMEM243Q9BU79 118 aa10.43□□□□□ -0.74
COL6A1-201ENST00000361866 NOP10Q9NPE3 64 aaKnown RBP10.43□□□□□ -0.74
COL6A1-201ENST00000361866 LAMTOR3Q9UHA4 124 aa10.43□□□□□ -0.74
COL6A1-201ENST00000361866 RAI1Q7Z5J4 1906 aaPredicted RBP10.43□□□□□ -0.74
COL6A1-201ENST00000361866 TRBV10-2A0A0K0K1G8 114 aa10.43□□□□□ -0.74
COL6A1-201ENST00000361866 ATP6V0E2Q8NHE4 81 aa10.43□□□□□ -0.74
COL6A1-201ENST00000361866 INAFM2P0DMQ5 153 aa10.43□□□□□ -0.74
COL6A1-201ENST00000361866 ZNF22P17026 224 aaPredicted RBP10.43□□□□□ -0.74
COL6A1-201ENST00000361866 FAM236AA0A1B0GUQ0 79 aa10.42□□□□□ -0.74
COL6A1-201ENST00000361866 FAM236BA0A1B0GV22 79 aa10.42□□□□□ -0.74
COL6A1-201ENST00000361866 FBXL19-AS1Q494R0 122 aa10.42□□□□□ -0.74
COL6A1-201ENST00000361866 HIST2H2BDQ6DRA6 164 aa10.42□□□□□ -0.74
COL6A1-201ENST00000361866 USP34Q70CQ2 3546 aa10.42□□□□□ -0.74
COL6A1-201ENST00000361866 MED14OSP0DP75 135 aa10.42□□□□□ -0.74
COL6A1-201ENST00000361866 NDUFV3P56181 108 aaKnown RBP10.42□□□□□ -0.74
COL6A1-201ENST00000361866 Q8N6K4 173 aa10.42□□□□□ -0.74
COL6A1-201ENST00000361866 LGALS9O00182 355 aa10.41□□□□□ -0.74
COL6A1-201ENST00000361866 ZNF462Q96JM2 2506 aa10.41□□□□□ -0.74
COL6A1-201ENST00000361866 IGHV1-58A0A0C4DH39 117 aa10.41□□□□□ -0.74
COL6A1-201ENST00000361866 IGHV3-33P01772 117 aa10.41□□□□□ -0.74
COL6A1-201ENST00000361866 IGHG4P01861 327 aa10.41□□□□□ -0.74
COL6A1-201ENST00000361866 ELANEP08246 267 aa10.41□□□□□ -0.74
COL6A1-201ENST00000361866 NFE4Q86UQ8 179 aa10.41□□□□□ -0.74
COL6A1-201ENST00000361866 CDKN2A-AS1Q9UH64 79 aa10.4□□□□□ -0.74
COL6A1-201ENST00000361866 TRACP01848 142 aa10.4□□□□□ -0.74
COL6A1-201ENST00000361866 EDN2P20800 178 aa10.4□□□□□ -0.74
COL6A1-201ENST00000361866 TMEM61Q8N0U2 210 aa10.4□□□□□ -0.74
COL6A1-201ENST00000361866 IGLV4-3A0A075B6K6 122 aa10.4□□□□□ -0.75
COL6A1-201ENST00000361866 TRIAP1O43715 76 aa10.39□□□□□ -0.75
COL6A1-201ENST00000361866 IGHV3-30P01768 117 aa10.39□□□□□ -0.75
COL6A1-201ENST00000361866 IGHV3-30-5P0DP03 117 aa10.39□□□□□ -0.75
COL6A1-201ENST00000361866 GPHB5Q86YW7 130 aa10.39□□□□□ -0.75
COL6A1-201ENST00000361866 C19orf84I3L1E1 186 aa10.39□□□□□ -0.75
COL6A1-201ENST00000361866 M0QY20 66 aa10.39□□□□□ -0.75
COL6A1-201ENST00000361866 ZMAT4Q9H898 229 aa10.39□□□□□ -0.75
COL6A1-201ENST00000361866 Q9HAA7 133 aa10.39□□□□□ -0.75
COL6A1-201ENST00000361866 SOCS3O14543 225 aa10.38□□□□□ -0.75
COL6A1-201ENST00000361866 XCL1P47992 114 aa10.38□□□□□ -0.75
COL6A1-201ENST00000361866 SVIPQ8NHG7 77 aa10.38□□□□□ -0.75
COL6A1-201ENST00000361866 C10orf105Q8TEF2 133 aa10.38□□□□□ -0.75
COL6A1-201ENST00000361866 Q96MF0 132 aa10.38□□□□□ -0.75
COL6A1-201ENST00000361866 IGKV3D-7A0A0C4DH55 119 aa10.38□□□□□ -0.75
COL6A1-201ENST00000361866 GATA3P23771 443 aa10.38□□□□□ -0.75
COL6A1-201ENST00000361866 VSIG2Q96IQ7 327 aa10.38□□□□□ -0.75
COL6A1-201ENST00000361866 SPATA25Q9BR10 227 aa10.38□□□□□ -0.75
COL6A1-201ENST00000361866 K7EMT4 169 aa10.38□□□□□ -0.75
COL6A1-201ENST00000361866 VPREB3Q9UKI3 123 aa10.38□□□□□ -0.75
COL6A1-201ENST00000361866 BOD1L1Q8NFC6 3051 aa10.37□□□□□ -0.75
COL6A1-201ENST00000361866 POLR2KP53803 58 aaKnown RBP10.37□□□□□ -0.75
COL6A1-201ENST00000361866 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
COL6A1-201ENST00000361866 TMEM223A0PJW6 202 aa10.37□□□□□ -0.75
COL6A1-201ENST00000361866 CRIP2P52943 208 aaPredicted RBP10.37□□□□□ -0.75
COL6A1-201ENST00000361866 SND1-IT1Q9HBX3 110 aa10.37□□□□□ -0.75
COL6A1-201ENST00000361866 PCSK5Q92824 1860 aa10.37□□□□□ -0.75
COL6A1-201ENST00000361866 IGLV2-18A0A075B6J9 118 aa10.36□□□□□ -0.75
COL6A1-201ENST00000361866 COL4A2P08572 1712 aa10.36□□□□□ -0.75
COL6A1-201ENST00000361866 TRAV13-2A0A0B4J235 113 aa10.36□□□□□ -0.75
COL6A1-201ENST00000361866 A6NDX4 124 aa10.36□□□□□ -0.75
COL6A1-201ENST00000361866 ZNF580Q9UK33 172 aa10.36□□□□□ -0.75
COL6A1-201ENST00000361866 TRBV27A0A0K0K1C4 114 aa10.35□□□□□ -0.75
COL6A1-201ENST00000361866 TSPEAR-AS2P59090 65 aa10.35□□□□□ -0.75
COL6A1-201ENST00000361866 SS18Q15532 418 aa10.35□□□□□ -0.75
COL6A1-201ENST00000361866 LINC00467Q9BRT7 94 aa10.35□□□□□ -0.75
COL6A1-201ENST00000361866 C11orf71Q6IPW1 123 aa10.35□□□□□ -0.75
COL6A1-201ENST00000361866 TMEM126AQ9H061 195 aa10.35□□□□□ -0.75
COL6A1-201ENST00000361866 IGHV4-4A0A075B6R2 117 aa10.34□□□□□ -0.75
COL6A1-201ENST00000361866 A0A0B4J2C4 111 aa10.34□□□□□ -0.75
COL6A1-201ENST00000361866 H3BT86 120 aa10.34□□□□□ -0.75
COL6A1-201ENST00000361866 MIAQ16674 131 aa10.34□□□□□ -0.75
COL6A1-201ENST00000361866 CCDC179H3BU77 68 aa10.34□□□□□ -0.75
COL6A1-201ENST00000361866 RPL32P62910 135 aaKnown RBP10.34□□□□□ -0.75
COL6A1-201ENST00000361866 HAMPP81172 84 aa10.34□□□□□ -0.75
COL6A1-201ENST00000361866 Q6ZSV7 163 aa10.34□□□□□ -0.75
COL6A1-201ENST00000361866 C1orf43Q9BWL3 253 aa10.34□□□□□ -0.75
COL6A1-201ENST00000361866 IGIPA6NJ69 53 aa10.33□□□□□ -0.76
COL6A1-201ENST00000361866 K7EQG2 157 aa10.33□□□□□ -0.76
COL6A1-201ENST00000361866 A0A1W2PPR1 153 aa10.33□□□□□ -0.76
COL6A1-201ENST00000361866 MIR7-3HGQ8N6C7 128 aa10.33□□□□□ -0.76
COL6A1-201ENST00000361866 ATP5G1P05496 136 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms