RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 NDUFA7O95182 113 aa10.1□□□□□ -0.79
LDB3-202ENST00000361373 ACYP1P07311 99 aa10.09□□□□□ -0.79
LDB3-202ENST00000361373 C20orf173Q96LM9 149 aa10.09□□□□□ -0.79
LDB3-202ENST00000361373 TRBV6-4A0A1B0GX49 114 aa10.09□□□□□ -0.79
LDB3-202ENST00000361373 LINC00322Q6ZN03 302 aaPredicted RBP10.09□□□□□ -0.79
LDB3-202ENST00000361373 KIR2DL5BQ8NHK3 375 aa10.09□□□□□ -0.79
LDB3-202ENST00000361373 TINCRA0A1B0GVN0 87 aa10.08□□□□□ -0.8
LDB3-202ENST00000361373 DEFB131BA0A096LNP1 70 aa10.08□□□□□ -0.8
LDB3-202ENST00000361373 CDSNQ15517 529 aa10.08□□□□□ -0.8
LDB3-202ENST00000361373 NTN5Q8WTR8 489 aaPredicted RBP10.08□□□□□ -0.8
LDB3-202ENST00000361373 TP53TG3Q9ULZ0 132 aa10.08□□□□□ -0.8
LDB3-202ENST00000361373 UFSP1Q6NVU6 142 aa10.07□□□□□ -0.8
LDB3-202ENST00000361373 GAGE12HA6NDE8 117 aa10.06□□□□□ -0.8
LDB3-202ENST00000361373 Q6ZUT4 128 aa10.06□□□□□ -0.8
LDB3-202ENST00000361373 C10orf99Q6UWK7 81 aa10.06□□□□□ -0.8
LDB3-202ENST00000361373 EP400Q96L91 3159 aa10.06□□□□□ -0.8
LDB3-202ENST00000361373 UBE2AP49459 152 aa10.06□□□□□ -0.8
LDB3-202ENST00000361373 REG3AQ06141 175 aa10.06□□□□□ -0.8
LDB3-202ENST00000361373 RS1O15537 224 aa10.05□□□□□ -0.8
LDB3-202ENST00000361373 DEFB105AQ8NG35 78 aa10.05□□□□□ -0.8
LDB3-202ENST00000361373 DIRC1Q969H9 104 aa10.05□□□□□ -0.8
LDB3-202ENST00000361373 ANKRD29Q8N6D5 301 aa10.05□□□□□ -0.8
LDB3-202ENST00000361373 MIR7-3HGQ8N6C7 128 aa10.05□□□□□ -0.8
LDB3-202ENST00000361373 ZNF580Q9UK33 172 aa10.05□□□□□ -0.8
LDB3-202ENST00000361373 PRRC2AP48634 2157 aaKnown RBP10.04□□□□□ -0.8
LDB3-202ENST00000361373 CRIP2P52943 208 aaPredicted RBP10.04□□□□□ -0.8
LDB3-202ENST00000361373 FRMD6-AS1P0C7T7 363 aa10.04□□□□□ -0.8
LDB3-202ENST00000361373 CFAP126Q5VTH2 177 aa10.04□□□□□ -0.8
LDB3-202ENST00000361373 TRAV10A0A0B4J240 114 aa10.04□□□□□ -0.8
LDB3-202ENST00000361373 JMJD7-PLA2G4BH0Y9G9 81 aa10.04□□□□□ -0.8
LDB3-202ENST00000361373 TRBV6-5A0A0K0K1A5 114 aa10.03□□□□□ -0.8
LDB3-202ENST00000361373 hADV29S1A0JD25 119 aa10.03□□□□□ -0.8
LDB3-202ENST00000361373 PIK3CD-AS1Q5SR53 167 aa10.03□□□□□ -0.8
LDB3-202ENST00000361373 C15orf53Q8NAA6 179 aa10.03□□□□□ -0.8
LDB3-202ENST00000361373 BRI3O95415 125 aa10.03□□□□□ -0.8
LDB3-202ENST00000361373 LINC00269Q8N2A0 174 aa10.03□□□□□ -0.8
LDB3-202ENST00000361373 NEXN-AS1Q8NBZ9 246 aa10.03□□□□□ -0.8
LDB3-202ENST00000361373 RNF183Q96D59 192 aa10.03□□□□□ -0.8
LDB3-202ENST00000361373 M0QY20 66 aa10.02□□□□□ -0.8
LDB3-202ENST00000361373 CEP295Q9C0D2 2601 aa10.02□□□□□ -0.81
LDB3-202ENST00000361373 KLLNB2CW77 178 aa10.02□□□□□ -0.81
LDB3-202ENST00000361373 TDRG1Q3Y452 100 aa10.02□□□□□ -0.81
LDB3-202ENST00000361373 TRBV6-8A0A0A6YYG3 113 aa10.02□□□□□ -0.81
LDB3-202ENST00000361373 LINC01620Q4KN68 170 aa10.01□□□□□ -0.81
LDB3-202ENST00000361373 NDUFB1O75438 58 aa10.01□□□□□ -0.81
LDB3-202ENST00000361373 CRYGDP07320 174 aa10.01□□□□□ -0.81
LDB3-202ENST00000361373 P0DMU3 169 aa10.01□□□□□ -0.81
LDB3-202ENST00000361373 FAM231AP0DMU4 169 aa10.01□□□□□ -0.81
LDB3-202ENST00000361373 FAM231CP0DMU5 169 aa10.01□□□□□ -0.81
LDB3-202ENST00000361373 C2CD3Q4AC94 2353 aa10.01□□□□□ -0.81
LDB3-202ENST00000361373 CRIP1P50238 77 aa10.01□□□□□ -0.81
LDB3-202ENST00000361373 LINC00482Q8N8I6 264 aa10.01□□□□□ -0.81
LDB3-202ENST00000361373 AVPP01185 164 aa10□□□□□ -0.81
LDB3-202ENST00000361373 CHCHD10Q8WYQ3 142 aaPredicted RBP10□□□□□ -0.81
LDB3-202ENST00000361373 IGHV4-4A0A075B6R2 117 aa10□□□□□ -0.81
LDB3-202ENST00000361373 PDE6GP18545 87 aa10□□□□□ -0.81
LDB3-202ENST00000361373 FXYD2P54710 66 aa10□□□□□ -0.81
LDB3-202ENST00000361373 MIAQ16674 131 aa10□□□□□ -0.81
LDB3-202ENST00000361373 TRBV27A0A0K0K1C4 114 aa10□□□□□ -0.81
LDB3-202ENST00000361373 NPSP0C0P6 89 aa10□□□□□ -0.81
LDB3-202ENST00000361373 MRGPRG-AS1Q2M3A8 158 aa10□□□□□ -0.81
LDB3-202ENST00000361373 LINC00467Q9BRT7 94 aa10□□□□□ -0.81
LDB3-202ENST00000361373 SPANXCQ9NY87 97 aa10□□□□□ -0.81
LDB3-202ENST00000361373 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
LDB3-202ENST00000361373 IGLV2-11P01706 119 aa10□□□□□ -0.81
LDB3-202ENST00000361373 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10□□□□□ -0.81
LDB3-202ENST00000361373 ANKRD11Q6UB99 2663 aaPredicted RBP10□□□□□ -0.81
LDB3-202ENST00000361373 C9orf153Q5TBE3 101 aa9.99□□□□□ -0.81
LDB3-202ENST00000361373 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
LDB3-202ENST00000361373 CEMP1Q6PRD7 247 aaPredicted RBP9.99□□□□□ -0.81
LDB3-202ENST00000361373 DAND5Q8N907 189 aa9.99□□□□□ -0.81
LDB3-202ENST00000361373 PLXNB1O43157 2135 aa9.99□□□□□ -0.81
LDB3-202ENST00000361373 H3BT86 120 aa9.99□□□□□ -0.81
LDB3-202ENST00000361373 DCANP1Q8TF63 244 aa9.99□□□□□ -0.81
LDB3-202ENST00000361373 U3KQK5 164 aa9.99□□□□□ -0.81
LDB3-202ENST00000361373 NCR3O14931 201 aa9.99□□□□□ -0.81
LDB3-202ENST00000361373 C4orf48Q5BLP8 95 aa9.99□□□□□ -0.81
LDB3-202ENST00000361373 TTTY13Q9BZ97 58 aa9.98□□□□□ -0.81
LDB3-202ENST00000361373 IGLV4-3A0A075B6K6 122 aa9.98□□□□□ -0.81
LDB3-202ENST00000361373 IGHV4-28A0A0C4DH34 117 aa9.98□□□□□ -0.81
LDB3-202ENST00000361373 Q6ZS46 218 aa9.97□□□□□ -0.81
LDB3-202ENST00000361373 TMEM256-PLSCR3K7ERE1 68 aa9.97□□□□□ -0.81
LDB3-202ENST00000361373 TRACP01848 142 aa9.97□□□□□ -0.81
LDB3-202ENST00000361373 KRTAP10-9P60411 292 aa9.97□□□□□ -0.81
LDB3-202ENST00000361373 IBA57-AS1B1ANH7 110 aa9.97□□□□□ -0.81
LDB3-202ENST00000361373 LECT2O14960 151 aa9.97□□□□□ -0.81
LDB3-202ENST00000361373 COX7BP24311 80 aa9.97□□□□□ -0.81
LDB3-202ENST00000361373 CDPF1Q6NVV7 123 aa9.97□□□□□ -0.81
LDB3-202ENST00000361373 TEN1Q86WV5 123 aa9.97□□□□□ -0.81
LDB3-202ENST00000361373 B9D2Q9BPU9 175 aa9.97□□□□□ -0.81
LDB3-202ENST00000361373 NFE4Q86UQ8 179 aa9.97□□□□□ -0.81
LDB3-202ENST00000361373 JMJD1CQ15652 2540 aa9.96□□□□□ -0.81
LDB3-202ENST00000361373 A0A0J9YXY3 114 aa9.96□□□□□ -0.82
LDB3-202ENST00000361373 C9orf85Q96MD7 179 aa9.96□□□□□ -0.82
LDB3-202ENST00000361373 CDKN2A-AS1Q9UH64 79 aa9.96□□□□□ -0.82
LDB3-202ENST00000361373 NREPQ16612 68 aa9.96□□□□□ -0.82
LDB3-202ENST00000361373 KIAA1549Q9HCM3 1950 aa9.96□□□□□ -0.82
LDB3-202ENST00000361373 RNASE3P12724 160 aaKnown RBP9.95□□□□□ -0.82
LDB3-202ENST00000361373 TRBV10-2A0A0K0K1G8 114 aa9.95□□□□□ -0.82
LDB3-202ENST00000361373 HIGD2BQ4VC39 106 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 201.7 ms