RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 LINC00269Q8N2A0 174 aa7.24□□□□□ -1.25
GABPA-201ENST00000354828 TIMM17AQ99595 171 aa7.24□□□□□ -1.25
GABPA-201ENST00000354828 TRBV6-1A0A0K0K1D8 114 aa7.24□□□□□ -1.25
GABPA-201ENST00000354828 C4orf48Q5BLP8 95 aa7.24□□□□□ -1.25
GABPA-201ENST00000354828 ZNF664Q8N3J9 261 aa7.24□□□□□ -1.25
GABPA-201ENST00000354828 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.24□□□□□ -1.25
GABPA-201ENST00000354828 ZNF80P51504 273 aaPredicted RBP7.24□□□□□ -1.25
GABPA-201ENST00000354828 KPRPQ5T749 579 aaPredicted RBP7.24□□□□□ -1.25
GABPA-201ENST00000354828 GTSF1Q8WW33 167 aa7.24□□□□□ -1.25
GABPA-201ENST00000354828 TANC2Q9HCD6 1990 aa7.24□□□□□ -1.25
GABPA-201ENST00000354828 C2orf82Q6UX34 121 aa7.23□□□□□ -1.25
GABPA-201ENST00000354828 COX7B2Q8TF08 81 aa7.23□□□□□ -1.25
GABPA-201ENST00000354828 RETNQ9HD89 108 aa7.23□□□□□ -1.25
GABPA-201ENST00000354828 LGALS9CQ6DKI2 356 aa7.23□□□□□ -1.25
GABPA-201ENST00000354828 TRAV13-2A0A0B4J235 113 aa7.23□□□□□ -1.25
GABPA-201ENST00000354828 HERV-K104P63124 156 aa7.23□□□□□ -1.25
GABPA-201ENST00000354828 REG3AQ06141 175 aa7.23□□□□□ -1.25
GABPA-201ENST00000354828 DKK2Q9UBU2 259 aa7.23□□□□□ -1.25
GABPA-201ENST00000354828 NDUFS6O75380 124 aaKnown RBP7.23□□□□□ -1.25
GABPA-201ENST00000354828 RAI1Q7Z5J4 1906 aaPredicted RBP7.23□□□□□ -1.25
GABPA-201ENST00000354828 U3KQK5 164 aa7.22□□□□□ -1.25
GABPA-201ENST00000354828 NUPR2A6NF83 97 aa7.22□□□□□ -1.25
GABPA-201ENST00000354828 CTRLP40313 264 aa7.22□□□□□ -1.25
GABPA-201ENST00000354828 KIR3DS1Q14943 382 aa7.22□□□□□ -1.25
GABPA-201ENST00000354828 LRCOL1A6NCL2 159 aa7.21□□□□□ -1.25
GABPA-201ENST00000354828 ADAMTS20P59510 1910 aa7.21□□□□□ -1.25
GABPA-201ENST00000354828 IGLV1-51P01701 117 aa7.21□□□□□ -1.25
GABPA-201ENST00000354828 NFE4Q86UQ8 179 aa7.21□□□□□ -1.25
GABPA-201ENST00000354828 ANKRD17O75179 2603 aaKnown RBP7.21□□□□□ -1.26
GABPA-201ENST00000354828 MPV17L2Q567V2 206 aa7.21□□□□□ -1.26
GABPA-201ENST00000354828 BRI3O95415 125 aa7.2□□□□□ -1.26
GABPA-201ENST00000354828 EXPH5Q8NEV8 1989 aa7.2□□□□□ -1.26
GABPA-201ENST00000354828 TRAV8-4A0A0B4J246 113 aa7.2□□□□□ -1.26
GABPA-201ENST00000354828 CXCL5P42830 114 aa7.2□□□□□ -1.26
GABPA-201ENST00000354828 LYPD6BQ8NI32 183 aa7.2□□□□□ -1.26
GABPA-201ENST00000354828 ZNF292O60281 2723 aa7.2□□□□□ -1.26
GABPA-201ENST00000354828 CEMP1Q6PRD7 247 aaPredicted RBP7.19□□□□□ -1.26
GABPA-201ENST00000354828 C11orf1Q9H5F2 150 aa7.19□□□□□ -1.26
GABPA-201ENST00000354828 PROK1P58294 105 aa7.19□□□□□ -1.26
GABPA-201ENST00000354828 ODF3L2Q3SX64 289 aa7.19□□□□□ -1.26
GABPA-201ENST00000354828 ZFAND2AQ8N6M9 145 aa7.19□□□□□ -1.26
GABPA-201ENST00000354828 LAMA2P24043 3122 aaKnown RBP7.19□□□□□ -1.26
GABPA-201ENST00000354828 TRBV6-4A0A1B0GX49 114 aa7.18□□□□□ -1.26
GABPA-201ENST00000354828 CFAP126Q5VTH2 177 aa7.18□□□□□ -1.26
GABPA-201ENST00000354828 C20orf203Q8NBC4 194 aa7.18□□□□□ -1.26
GABPA-201ENST00000354828 G3V4G9 280 aa7.18□□□□□ -1.26
GABPA-201ENST00000354828 LECT2O14960 151 aa7.18□□□□□ -1.26
GABPA-201ENST00000354828 CHCHD10Q8WYQ3 142 aaPredicted RBP7.18□□□□□ -1.26
GABPA-201ENST00000354828 EDN2P20800 178 aa7.18□□□□□ -1.26
GABPA-201ENST00000354828 HIST1H4AP62805 103 aaKnown RBP7.18□□□□□ -1.26
GABPA-201ENST00000354828 KRTAP24-1Q3LI83 254 aa7.18□□□□□ -1.26
GABPA-201ENST00000354828 PRM2P04554 102 aa7.17□□□□□ -1.26
GABPA-201ENST00000354828 DCANP1Q8TF63 244 aa7.17□□□□□ -1.26
GABPA-201ENST00000354828 SND1-IT1Q9HBX3 110 aa7.17□□□□□ -1.26
GABPA-201ENST00000354828 A0A1B0GV90 55 aa7.17□□□□□ -1.26
GABPA-201ENST00000354828 C9JAW5 83 aa7.17□□□□□ -1.26
GABPA-201ENST00000354828 GAGE2AQ6NT46 116 aa7.17□□□□□ -1.26
GABPA-201ENST00000354828 Q6ZUT4 128 aa7.17□□□□□ -1.26
GABPA-201ENST00000354828 CLUHP3Q96NS8 147 aa7.17□□□□□ -1.26
GABPA-201ENST00000354828 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
GABPA-201ENST00000354828 C19orf71A6NCJ1 209 aa7.16□□□□□ -1.26
GABPA-201ENST00000354828 NCR3O14931 201 aa7.16□□□□□ -1.26
GABPA-201ENST00000354828 A0A087WZ39 114 aa7.16□□□□□ -1.26
GABPA-201ENST00000354828 CPAMD8Q8IZJ3 1885 aa7.16□□□□□ -1.26
GABPA-201ENST00000354828 TRBV6-8A0A0A6YYG3 113 aa7.16□□□□□ -1.26
GABPA-201ENST00000354828 SOCS3O14543 225 aa7.16□□□□□ -1.26
GABPA-201ENST00000354828 RS1O15537 224 aa7.16□□□□□ -1.26
GABPA-201ENST00000354828 NEXN-AS1Q8NBZ9 246 aa7.16□□□□□ -1.26
GABPA-201ENST00000354828 Q8N976 141 aa7.15□□□□□ -1.26
GABPA-201ENST00000354828 C7orf33Q8WU49 177 aa7.15□□□□□ -1.26
GABPA-201ENST00000354828 DSCR8Q96T75 97 aa7.15□□□□□ -1.26
GABPA-201ENST00000354828 PRSS47A8MTI9 375 aa7.15□□□□□ -1.26
GABPA-201ENST00000354828 NHLRC4P0CG21 123 aaPredicted RBP7.15□□□□□ -1.26
GABPA-201ENST00000354828 CRIP2P52943 208 aaPredicted RBP7.15□□□□□ -1.27
GABPA-201ENST00000354828 PRO1854Q9UHT4 67 aa7.15□□□□□ -1.27
GABPA-201ENST00000354828 LINC00322Q6ZN03 302 aaPredicted RBP7.14□□□□□ -1.27
GABPA-201ENST00000354828 TOMM6Q96B49 74 aa7.14□□□□□ -1.27
GABPA-201ENST00000354828 RBMY1FQ15415 496 aaKnown RBP7.14□□□□□ -1.27
GABPA-201ENST00000354828 C10orf91Q5T1B1 145 aa7.14□□□□□ -1.27
GABPA-201ENST00000354828 DAND5Q8N907 189 aa7.14□□□□□ -1.27
GABPA-201ENST00000354828 BAALCQ8WXS3 180 aa7.14□□□□□ -1.27
GABPA-201ENST00000354828 B9D2Q9BPU9 175 aa7.14□□□□□ -1.27
GABPA-201ENST00000354828 LINC00467Q9BRT7 94 aa7.14□□□□□ -1.27
GABPA-201ENST00000354828 PYY3Q5JQD4 70 aa7.14□□□□□ -1.27
GABPA-201ENST00000354828 DSCAML1Q8TD84 2053 aa7.13□□□□□ -1.27
GABPA-201ENST00000354828 HCFC1P51610 2035 aa7.13□□□□□ -1.27
GABPA-201ENST00000354828 BVES-AS1Q5T3Y7 98 aa7.13□□□□□ -1.27
GABPA-201ENST00000354828 CARD19Q96LW7 228 aa7.13□□□□□ -1.27
GABPA-201ENST00000354828 IGHV1-58A0A0C4DH39 117 aa7.13□□□□□ -1.27
GABPA-201ENST00000354828 LOC100131303A0A0U1RQF7 123 aa7.13□□□□□ -1.27
GABPA-201ENST00000354828 LELP1Q5T871 98 aa7.13□□□□□ -1.27
GABPA-201ENST00000354828 COX8AP10176 69 aa7.13□□□□□ -1.27
GABPA-201ENST00000354828 MIAQ16674 131 aa7.13□□□□□ -1.27
GABPA-201ENST00000354828 C9orf153Q5TBE3 101 aa7.13□□□□□ -1.27
GABPA-201ENST00000354828 HIGD2AQ9BW72 106 aa7.13□□□□□ -1.27
GABPA-201ENST00000354828 Q6ZTC4 211 aa7.13□□□□□ -1.27
GABPA-201ENST00000354828 IGLC6P0CF74 106 aa7.12□□□□□ -1.27
GABPA-201ENST00000354828 MRGPRG-AS1Q2M3A8 158 aa7.12□□□□□ -1.27
GABPA-201ENST00000354828 MAJINQ3KP22 176 aa7.12□□□□□ -1.27
GABPA-201ENST00000354828 ZNF580Q9UK33 172 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms